RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ABHD17CQ6PCB6 329 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 GRINAQ7Z429 371 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF740Q8NDX6 193 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 B3GNT7Q8NFL0 401 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 RNF128Q8TEB7 428 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 CNOT9Q92600 299 aaKnown RBP12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 C8orf44Q96CB5 159 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 SNX18Q96RF0 628 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 NUDT9Q9BW91 350 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 PLA2G2FQ9BZM2 168 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 CLMPQ9H6B4 373 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 RASD1Q9Y272 281 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 FAM90A27PA6NNH2 459 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 DOK2O60496 412 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 PIAS2O75928 621 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF182P17025 639 aaPredicted RBP12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 NDUFB7P17568 137 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 TAS2R31P59538 309 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 OR1C1Q15619 314 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 OR5J2Q8NH18 312 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 AGAP5A6NIR3 686 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 PIGFQ07326 219 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 SQSTM1Q13501 440 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 LMNTD1Q8N9Z9 388 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 DMBX1Q8NFW5 382 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 MKRN2Q9H000 416 aaKnown RBP12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF286AQ9HBT8 521 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 LANCL2Q9NS86 450 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 CD82P27701 267 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 CCR2P41597 374 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 HOXA1P49639 335 aaPredicted RBP12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 MSMO1Q15800 293 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF404Q494X3 552 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 OR8H3Q8N146 312 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 UPRTQ96BW1 309 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF582Q96NG8 517 aaPredicted RBP12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 HIF1ANQ9NWT6 349 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 MTCH2Q9Y6C9 303 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 METTL15A6NJ78 407 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 CEBPZOSA8MTT3 80 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 MT-ATP6P00846 226 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 AMY2AP04746 511 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 FOXA1P55317 472 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 GRB2P62993 217 aaKnown RBP12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 BCL2A1Q16548 175 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF750Q32MQ0 723 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 GTDC1Q4AE62 458 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF322Q6U7Q0 402 aaPredicted RBP12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 MEPCEQ7L2J0 689 aaKnown RBP12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 NLRC3Q7RTR2 1065 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 TAAR8Q969N4 342 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 TM4SF18Q96CE8 201 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 TSPAN10Q9H1Z9 355 aaPredicted RBP12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 CSNK1G3Q9Y6M4 447 aa12.57□□□□□ -0.4
PDGFRB-201ENST00000261799 MYH6P13533 1939 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF593O00488 134 aaPredicted RBP12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 SPINT2O43291 252 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 GSTP1P09211 210 aaKnown RBP12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 FGL1Q08830 312 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 Q6ZNB5 142 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 COQ10AQ96MF6 247 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF300Q96RE9 604 aaPredicted RBP12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 MGAT4CQ9UBM8 478 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 A0A087WZY1 265 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 HSD17B1P14061 328 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 EMP3P54852 163 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 SYPL1Q16563 259 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 PNPLA1Q8N8W4 532 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 OR9Q2Q8NGE9 314 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 OCSTAMPQ9BR26 566 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 CHST8Q9H2A9 424 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 DENRO43583 198 aaKnown RBP12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 GRPP07492 148 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 MAP2K4P45985 399 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 STT3AP46977 705 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 SLC35D2Q76EJ3 337 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 DCLRE1CQ96SD1 692 aaKnown RBP12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 OLAHQ9NV23 265 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 KIAA1456Q9P272 454 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 TRAV18A0A075B6X5 111 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 IFNA7P01567 189 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 IFNA17P01571 189 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 NME1P15531 152 aaKnown RBP12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 CD34P28906 385 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 LCN1P31025 176 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 MTCP1P56278 107 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 SNRPD2P62316 118 aaKnown RBP12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 C1orf140Q5VVS0 124 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 LCN8Q6JVE9 175 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 KCTD20Q7Z5Y7 419 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 ZFP41Q8N8Y5 198 aa12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 KISS1RQ969F8 398 aaPredicted RBP12.56□□□□□ -0.4
PDGFRB-201ENST00000261799 MYH4Q9Y623 1939 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 SLC22A23A1A5C7 686 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 VAMP5O95183 116 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 MAGEA6P43360 314 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 COL28A1Q2UY09 1125 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 GUSBP11Q6P575 273 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 H1FNTQ75WM6 255 aaPredicted RBP12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 LILRA2Q8N149 483 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms