RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 ZIC4Q8N9L1 334 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 OR9K2Q8NGE7 335 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 HTRA1Q92743 480 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 MAL2Q969L2 176 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 RADILQ96JH8 1075 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 MGAT4BQ9UQ53 548 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 PCDHB14Q9Y5E9 798 aa16.68■□□□□ 0.26
TM6SF1-201ENST00000258909 FRS3O43559 492 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 SSX4O60224 188 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 TTKP33981 857 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 LARS2Q15031 903 aaKnown RBP16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 BEND6Q5SZJ8 279 aaPredicted RBP16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 AAED1Q7RTV5 226 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 GTF2H4Q92759 462 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 DHRS9Q9BPW9 319 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 CACNG6Q9BXT2 260 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 PAIP1Q9H074 479 aaKnown RBP16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 SLC17A5Q9NRA2 495 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 USH1CQ9Y6N9 552 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 A0A0G2JPF8 293 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 FAM234BA2RU67 622 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 AQP7P3A6NL99 342 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 HNRNPCL2B2RXH8 293 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 HNRNPCL3B7ZW38 293 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 HNRNPCL1O60812 293 aaKnown RBP16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 HNRNPCL4P0DMR1 293 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 IRX1P78414 480 aaPredicted RBP16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 LGALS3BPQ08380 585 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 RNF220Q5VTB9 566 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 TMEM225Q6GV28 225 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 EPGNQ6UW88 154 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 MSANTD1Q6ZTZ1 278 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 TMEM45BQ96B21 275 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 TAPBPLQ9BX59 468 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 AMBRA1Q9C0C7 1298 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 DCTN4Q9UJW0 460 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 ADAM21Q9UKJ8 722 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 ZNF232Q9UNY5 417 aa16.67■□□□□ 0.26
TM6SF1-201ENST00000258909 ATRQ13535 2644 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 TMEM247A6NEH6 219 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 A8MVM7 634 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 CLIC1O00299 241 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 KLF11O14901 512 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 ERLIN1O75477 346 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 FABP6P51161 128 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 RGNQ15493 299 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 ZNF311Q5JNZ3 666 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 C1orf140Q5VVS0 124 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 DNM1P46Q6ZS02 220 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 MUC15Q8N387 334 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 C3orf49Q96BT1 292 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 SF3B5Q9BWJ5 86 aaKnown RBP16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 SPATA9Q9BWV2 254 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 GRIP2Q9C0E4 1043 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 CACYBPQ9HB71 228 aaKnown RBP16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 CBLN4Q9NTU7 201 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 ATP23Q9Y6H3 246 aa16.66■□□□□ 0.26
TM6SF1-201ENST00000258909 CHD3Q12873 2000 aaKnown RBP16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 MPGP29372 298 aa16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 P2RY4P51582 365 aa16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 DMTNQ08495 405 aa16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 HIKESHIQ53FT3 197 aa16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 C11orf71Q6IPW1 123 aa16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 FBXL14Q8N1E6 418 aa16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 DEPDC4Q8N2C3 294 aa16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 KDM8Q8N371 416 aa16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 SLC25A36Q96CQ1 311 aa16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 BARX1Q9HBU1 254 aaPredicted RBP16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 SLAMF8Q9P0V8 285 aa16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 AMDHD2Q9Y303 409 aa16.65■□□□□ 0.26
TM6SF1-201ENST00000258909 SELENOPP49908 381 aa16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 NUDT6P53370 316 aa16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 TGFBR3Q03167 851 aa16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 PRAMEF8Q5VWM4 474 aa16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 PRAMEF7Q5VXH5 474 aa16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 C17orf78Q8N4C9 275 aa16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 C1orf162Q8NEQ5 155 aaPredicted RBP16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 ADAD1Q96M93 576 aaKnown RBP16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 MDFIQ99750 246 aa16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 EBF4Q9BQW3 602 aa16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 RSPO3Q9BXY4 272 aaPredicted RBP16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 SLCO1B3Q9NPD5 702 aa16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 THUMPD1Q9NXG2 353 aaKnown RBP16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 SLC25A37Q9NYZ2 338 aa16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 IFT52Q9Y366 437 aa16.64■□□□□ 0.25
TM6SF1-201ENST00000258909 COL6A5A8TX70 2615 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 IGHV4-30-2A0A087WSY4 118 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 TMEM229AB2RXF0 380 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 NPIPB7O75200 414 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 KRT33AO76009 404 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 LGI1O95970 557 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 HOXB9P17482 250 aaPredicted RBP16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 PRPS1P60891 318 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 NRF1Q16656 503 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 CREB3L2Q70SY1 520 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 FUNDC1Q8IVP5 155 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 C10orf111Q8N326 155 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 POMGNT2Q8NAT1 580 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 ARMC7Q9H6L4 198 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 A4GALTQ9NPC4 353 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms