RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 IER3IP1Q9Y5U9 82 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 TP73O15350 636 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 STOMP27105 288 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 SRD5A2P31213 254 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 GPR107Q5VW38 600 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 NUFIP2Q7Z417 695 aaKnown RBP12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 ANKRD37Q7Z713 158 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 SPACA1Q9HBV2 294 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 FABP12A6NFH5 140 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF254O75437 659 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 RPS5P46782 204 aaKnown RBP12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 GFERP55789 205 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 PUDPQ08623 228 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 KLRB1Q12918 225 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 RAB31Q13636 194 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 ACER2Q5QJU3 275 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 FCRLAQ7L513 359 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF764Q96H86 408 aaPredicted RBP12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 ZFP64Q9NPA5 681 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 DCAF13Q9NV06 445 aaKnown RBP12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 ITGB1BP2Q9UKP3 347 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 NME7Q9Y5B8 376 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 OR1E2P47887 323 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 CEACAM7Q14002 265 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 FHL5Q5TD97 284 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 SLC35D2Q76EJ3 337 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 FCAMRQ8WWV6 532 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 ITFG2Q969R8 447 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 TXLNGYQ9BZA5 131 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 GLIPR2Q9H4G4 154 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 ACER3Q9NUN7 267 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 ERVK-18Q9QC07 812 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF195O14628 629 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 PSKH1P11801 424 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 COL28A1Q2UY09 1125 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 NKAPLQ5M9Q1 402 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 LSM14AQ8ND56 463 aaKnown RBP12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 FBXO27Q8NI29 283 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 RAB1BQ9H0U4 201 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF391Q9UJN7 358 aa12.38□□□□□ -0.43
PRPF38A-201ENST00000257181 DRD3P35462 400 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 DUSP8Q13202 625 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 KCNAB1Q14722 419 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 FAM109AQ8N4B1 249 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 NDNFQ8TB73 568 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 ZFP90Q8TF47 636 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 NMD3Q96D46 503 aaKnown RBP12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 PAHP00439 452 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 OR8G3PP0DMU2 310 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 MSR1P21757 451 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 CDK2P24941 298 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 PRKCDQ05655 676 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 MFAP5Q13361 173 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 ACTBL2Q562R1 376 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 SLC35A4Q96G79 324 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 PCDHAC1Q9H158 963 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 ABCD4O14678 606 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 PRAMEF10O60809 474 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 CRYBA1P05813 215 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 GPX3P22352 226 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 MAGEA12P43365 314 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 AWAT2Q6E213 333 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 CDHR3Q6ZTQ4 885 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 SPATC1Q76KD6 591 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 TMEM150AQ86TG1 271 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 MSI2Q96DH6 328 aaKnown RBP12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 SAMD8Q96LT4 415 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 PAPOLGQ9BWT3 736 aaKnown RBP12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 METTL15A6NJ78 407 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 KDM4EB2RXH2 506 aaPredicted RBP12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 F5H5K5 113 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 SOX14O95416 240 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 AMY2BP19961 511 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 ADH6P28332 368 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 PIGAP37287 484 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 RAB12Q6IQ22 244 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 MAMSTRQ6ZN01 415 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 TOMM5Q8N4H5 51 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 OR2A1Q8NGT9 310 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 RGCCQ9H4X1 137 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 CXorf21Q9HAI6 301 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 ARMC1Q9NVT9 282 aa12.37□□□□□ -0.43
PRPF38A-201ENST00000257181 TAS2R31P59538 309 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 CATR1Q13166 79 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 SAXO2Q658L1 398 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 RFLNAQ6ZTI6 216 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 OR56B2PQ8NGI1 322 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 WDR34Q96EX3 536 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 LRR1Q96L50 414 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF582Q96NG8 517 aaPredicted RBP12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 OR2A14Q96R47 310 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 SLC7A8Q9UHI5 535 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 CASP8AP2Q9UKL3 1982 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 CDK5RAP2Q96SN8 1893 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 IMPA2O14732 288 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 EIF4EP06730 217 aaKnown RBP12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 FABP1P07148 127 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 PPP3CBP16298 524 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 TBXA2RP21731 343 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 PGGHGQ32M88 737 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms