RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 SSTR4P31391 388 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 RAB4BP61018 213 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 SIRPAP78324 504 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 TBC1D28Q2M2D7 210 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 MPEG1Q2M385 716 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 CLEC14AQ86T13 490 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 KIF18BQ86Y91 864 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 GTF2H4Q92759 462 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 SDSLQ96GA7 329 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 R3HDMLQ9H3Y0 253 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 C1orf198Q9H425 327 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 MBNL1Q9NR56 388 aaKnown RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 TP53TG5Q9Y2B4 290 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 MED16Q9Y2X0 877 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 IGLV3-10A0A075B6K4 115 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 TMEM212A6NML5 194 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 CEBPZOSA8MTT3 80 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 HOXC11O43248 304 aaPredicted RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ATP6V1G1O75348 118 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 SLCO2B1O94956 709 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ITGB2P05107 769 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ETV5P41161 510 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 HTR2BP41595 481 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 BIDP55957 195 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 TNK1Q13470 666 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 SMAD4Q13485 552 aaKnown RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 OR8B8Q15620 311 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 OR7E24Q6IFN5 339 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 RPL22L1Q6P5R6 122 aaKnown RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 NRG4Q8WWG1 115 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 MALSU1Q96EH3 234 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 NKX3-1Q99801 234 aaPredicted RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 HAO2Q9NYQ3 351 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ANKRD33BA6NCL7 494 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 FAM183AA6NL82 134 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 KLRC4-KLRK1H3BQV0 150 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 PRAF2O60831 178 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 PFN3P60673 137 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 USF2Q15853 346 aaPredicted RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 LTC4SQ16873 150 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 FAM111BQ6SJ93 734 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 FBXW12Q6X9E4 464 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ANKRD33Q7Z3H0 272 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 SPARTQ8N0X7 666 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 GTPBP8Q8N3Z3 284 aaPredicted RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 THOC3Q96J01 351 aaKnown RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 QRSL1Q9H0R6 528 aaKnown RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 EHFQ9NZC4 300 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 DHCR7Q9UBM7 475 aaKnown RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 KCND3Q9UK17 655 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 HSPB6O14558 160 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 AP1G1O43747 822 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 GAAP10253 952 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 TAS2R19P59542 299 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF750Q32MQ0 723 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 KRBOX4Q5JUW0 171 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 HENMT1Q5T8I9 393 aaKnown RBP8.08□□□□□ -1.12
PTCD3-201ENST00000254630 GLB1L2Q8IW92 636 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF679Q8IYX0 411 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF845Q96IR2 970 aaPredicted RBP8.08□□□□□ -1.12
PTCD3-201ENST00000254630 HYLS1Q96M11 299 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 SLA2Q9H6Q3 261 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 C12orf49Q9H741 205 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 MED17Q9NVC6 651 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 ENSAO43768 121 aaKnown RBP8.08□□□□□ -1.12
PTCD3-201ENST00000254630 PRICKLE2Q7Z3G6 844 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 CCDC28AQ8IWP9 274 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 FAM83FQ8NEG4 500 aaPredicted RBP8.08□□□□□ -1.12
PTCD3-201ENST00000254630 FNDC8Q8TC99 324 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 WFDC5Q8TCV5 224 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 TAAR8Q969N4 342 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF582Q96NG8 517 aaPredicted RBP8.08□□□□□ -1.12
PTCD3-201ENST00000254630 C7orf50Q9BRJ6 194 aaKnown RBP8.08□□□□□ -1.12
PTCD3-201ENST00000254630 WDR76Q9H967 626 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 STK17BO94768 372 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 SLC35E2P0CK97 266 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 OPRL1P41146 370 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 KIR2DL3P43628 341 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 SFRP5Q5T4F7 317 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF585AQ6P3V2 769 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 OR4M1Q8NGD0 313 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 OR56B2PQ8NGI1 322 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 POC1BQ8TC44 478 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 SLC38A5Q8WUX1 472 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 TMEM255BQ8WV15 326 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 DEDD2Q8WXF8 326 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 PDXPQ96GD0 296 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 SLC25A31Q9H0C2 315 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 LHX6Q9UPM6 363 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 RASD1Q9Y272 281 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 KIAA1551Q9HCM1 1747 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 OR6C76A6NM76 312 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF814B7Z6K7 855 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 SPDEFO95238 335 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 NUDT7P0C024 238 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 DPP4P27487 766 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 PTPN6P29350 595 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 BDKRB2P30411 391 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 IRS1P35568 1242 aa8.08□□□□□ -1.12
PTCD3-201ENST00000254630 EIF2DP41214 584 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms