RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TMEM27Q9HBJ8 222 aa14.26□□□□□ -0.13
DDX55-201ENST00000238146 GPN1Q9HCN4 374 aaPredicted RBP14.26□□□□□ -0.13
DDX55-201ENST00000238146 ZC4H2Q9NQZ6 224 aa14.26□□□□□ -0.13
DDX55-201ENST00000238146 FLRT3Q9NZU0 649 aa14.26□□□□□ -0.13
DDX55-201ENST00000238146 C19orf53Q9UNZ5 99 aaPredicted RBP14.26□□□□□ -0.13
DDX55-201ENST00000238146 A0A1B0GTQ1 180 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 OTOL1A6NHN0 477 aaPredicted RBP14.25□□□□□ -0.13
DDX55-201ENST00000238146 IDSB3KWA1 339 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 ARPC5O15511 151 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 SNAPC5O75971 98 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 NDUFB6O95139 128 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 HIST1H2ABP04908 130 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 IFNA16P05015 189 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 CEBPBP17676 345 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 CALCRP30988 508 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 MECP2P51608 486 aaKnown RBP14.25□□□□□ -0.13
DDX55-201ENST00000238146 GGTLC2Q14390 218 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 GAS6Q14393 721 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 CFAP77Q6ZQR2 320 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 HIST3H2AQ7L7L0 130 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 STPG2Q8N412 459 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 COX18Q8N8Q8 333 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 HIST1H2ACQ93077 130 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 RAB7BQ96AH8 199 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 DPYSL5Q9BPU6 564 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 WSB2Q9NYS7 404 aaPredicted RBP14.25□□□□□ -0.13
DDX55-201ENST00000238146 OR5V1Q9UGF6 321 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 CHRNA9Q9UGM1 479 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 MKI67P46013 3256 aaKnown RBP14.25□□□□□ -0.13
DDX55-201ENST00000238146 A0A0B4J2E0 115 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 ABHD14A-ACY1A0A1B0GW23 586 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 A0A1B0GX12 115 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 TCRBV16S1A1N1A0A5B0 115 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 TEX46H3BTG2 121 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 PDCD5O14737 125 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 GPRIN2O60269 458 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 FGF2P09038 288 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 CSRP2Q16527 193 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 EXOSC6Q5RKV6 272 aaKnown RBP14.25□□□□□ -0.13
DDX55-201ENST00000238146 FHL5Q5TD97 284 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 B3GNTL1Q67FW5 361 aaPredicted RBP14.25□□□□□ -0.13
DDX55-201ENST00000238146 TMUB2Q71RG4 321 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 SAMD14Q8IZD0 417 aaPredicted RBP14.25□□□□□ -0.13
DDX55-201ENST00000238146 FBXW5Q969U6 566 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 RSPRY1Q96DX4 576 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 DMRTA2Q96SC8 542 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 TMEM74BQ9NUR3 256 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 PFDN2Q9UHV9 154 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 INSL6Q9Y581 213 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 V9GY05 133 aa14.25□□□□□ -0.13
DDX55-201ENST00000238146 A0A0C4DFX4 3053 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 A0A1B0GWA3 101 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 ANXA2P2A6NMY6 339 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 C1QTNF3-AMACRE9PGA6 284 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 NUPL2O15504 423 aaKnown RBP14.24□□□□□ -0.13
DDX55-201ENST00000238146 RP2O75695 350 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 CPMP14384 443 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 GABRA1P14867 456 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 CDK2P24941 298 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 ILF3Q12906 894 aaKnown RBP eCLIP14.24□□□□□ -0.136e-7■□□□□ 8.1
DDX55-201ENST00000238146 RUNX2Q13950 521 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 GRASPQ7Z6J2 395 aaPredicted RBP14.24□□□□□ -0.13
DDX55-201ENST00000238146 OR14A16Q8NHC5 309 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
DDX55-201ENST00000238146 HHIPL1Q96JK4 782 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 PTCHD1Q96NR3 888 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 ZNF559Q9BR84 538 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 LDAHQ9H6V9 325 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 DEC1Q9P2X7 70 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 OPN4Q9UHM6 478 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 GPR89AB7ZAQ6 455 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 PYCARD-AS1I3L0S3 204 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 SELENOFO60613 162 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 ADAM11O75078 769 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 GPR89BP0CG08 455 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 VSIG10L2P0DP72 767 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 NANOS3P60323 173 aaKnown RBP14.24□□□□□ -0.13
DDX55-201ENST00000238146 MRPS10P82664 201 aaKnown RBP14.24□□□□□ -0.13
DDX55-201ENST00000238146 OC90Q02509 493 aaPredicted RBP14.24□□□□□ -0.13
DDX55-201ENST00000238146 STX4Q12846 297 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 CBFBQ13951 182 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 USP53Q70EK8 1073 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 ZAR1Q86SH2 424 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 RGP1Q92546 391 aaPredicted RBP14.24□□□□□ -0.13
DDX55-201ENST00000238146 PNPLA2Q96AD5 504 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 HAVCR1Q96D42 359 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 ZNF426Q9BUY5 554 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 TTYH1Q9H313 450 aaPredicted RBP14.24□□□□□ -0.13
DDX55-201ENST00000238146 DUSP22Q9NRW4 184 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 IER3IP1Q9Y5U9 82 aa14.24□□□□□ -0.13
DDX55-201ENST00000238146 HMSDA8MTL9 139 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 ACOT7O00154 380 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 PSMD9O00233 223 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 SIX6O95475 246 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 RAB40ALP0C0E4 278 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 DRD3P35462 400 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 DIO1P49895 249 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 H2BFSP57053 126 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 IL10RAQ13651 578 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 PON3Q15166 354 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms