RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ECDO95905 644 aaPredicted RBP18.89■□□□□ 0.61
SNX3-201ENST00000230085 EPXP11678 715 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 ZP3P21754 424 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 RPS4Y1P22090 263 aaKnown RBP18.89■□□□□ 0.61
SNX3-201ENST00000230085 ATP5A1P25705 553 aaKnown RBP18.89■□□□□ 0.61
SNX3-201ENST00000230085 ZNF81P51508 661 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 ZNF136P52737 540 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 GBX2P52951 348 aaPredicted RBP18.89■□□□□ 0.61
SNX3-201ENST00000230085 OR10A3P58181 314 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 NHLRC3Q5JS37 347 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 B3GLCTQ6Y288 498 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 OR2L5Q8NG80 312 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 TMEM255BQ8WV15 326 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 PMM1Q92871 262 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 FAM122AQ96E09 287 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 CD180Q99467 661 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 SIDT1Q9NXL6 827 aaKnown RBP18.89■□□□□ 0.61
SNX3-201ENST00000230085 ST6GALNAC2Q9UJ37 374 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 ACSL5Q9ULC5 683 aa18.89■□□□□ 0.61
SNX3-201ENST00000230085 TRAPPC13A5PLN9 417 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 SULT1B1O43704 296 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 LYPD3O95274 346 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 AIFM1O95831 613 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 UCHL1P09936 223 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 ZNF250P15622 560 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 CALCRP30988 508 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 LCN1P31025 176 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 MNDAP41218 407 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 SRP9P49458 86 aaKnown RBP18.88■□□□□ 0.61
SNX3-201ENST00000230085 EEF1A1P68104 462 aaKnown RBP18.88■□□□□ 0.61
SNX3-201ENST00000230085 DUSP2Q05923 314 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 SNTB2Q13425 540 aaKnown RBP18.88■□□□□ 0.61
SNX3-201ENST00000230085 EXOSC6Q5RKV6 272 aaKnown RBP18.88■□□□□ 0.61
SNX3-201ENST00000230085 METTL11BQ5VVY1 283 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 ARL9Q6T311 187 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 IL20RBQ6UXL0 311 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 C16orf62Q7Z3J2 963 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 KCTD20Q7Z5Y7 419 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 ACOT4Q8N9L9 421 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 LINC01555Q8NAE3 123 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 ZNF527Q8NB42 609 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 OR51Q1Q8NH59 317 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 OR4C6Q8NH72 309 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 FANK1Q8TC84 345 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 PATE1Q8WXA2 126 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 RBPMSQ93062 196 aaKnown RBP18.88■□□□□ 0.61
SNX3-201ENST00000230085 ZG16BQ96DA0 208 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 TEAD3Q99594 435 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 AIFM2Q9BRQ8 373 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 MRI1Q9BV20 369 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 DPCDQ9BVM2 203 aaPredicted RBP18.88■□□□□ 0.61
SNX3-201ENST00000230085 ADGRL4Q9HBW9 690 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 KCMF1Q9P0J7 381 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 ATG4BQ9Y4P1 393 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 A0A1W2PPL8 197 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 PIP5K1CO60331 668 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 KCNJ13O60928 360 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 PRKAG1P54619 331 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 DGCR2P98153 550 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 ZNF85Q03923 595 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 SLC25A35Q3KQZ1 300 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 ARHGAP11BQ3KRB8 267 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 ACSM3Q53FZ2 586 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 SAMD14Q8IZD0 417 aaPredicted RBP18.88■□□□□ 0.61
SNX3-201ENST00000230085 OR6V1Q8N148 313 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 BMPERQ8N8U9 685 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 OR2A1Q8NGT9 310 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 PTP4A1Q93096 173 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 MS4A4EQ96PG1 132 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 YIPF4Q9BSR8 244 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 C20orf85Q9H1P6 137 aa18.88■□□□□ 0.61
SNX3-201ENST00000230085 PCDHGA9Q9Y5G4 932 aaKnown RBP18.88■□□□□ 0.61
SNX3-201ENST00000230085 TRBV23OR9-2A0A075B6M9 112 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 LOC105369274A0A096LPK9 316 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 B4DGG1 531 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 FLRT2O43155 660 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 FRS3O43559 492 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 SIGLEC6O43699 453 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 GIPP09681 153 aaPredicted RBP18.87■□□□□ 0.61
SNX3-201ENST00000230085 IFI6P09912 130 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 MYF5P13349 255 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 BMP7P18075 431 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 NT5EP21589 574 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 PSMB5P28074 263 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 PLA2G5P39877 138 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 GRK6P43250 576 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 CCR9P51686 369 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 AP3S2P59780 193 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 MRPS10P82664 201 aaKnown RBP18.87■□□□□ 0.61
SNX3-201ENST00000230085 POU4F3Q15319 338 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 UBE2NLQ5JXB2 153 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 UNQ9370/PRO34162Q6UXP9 181 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 RANBP3LQ86VV4 465 aaPredicted RBP18.87■□□□□ 0.61
SNX3-201ENST00000230085 OR4N4Q8N0Y3 316 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 OR2L8Q8NGY9 312 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 RHBDD1Q8TEB9 315 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 ZDHHC1Q8WTX9 485 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 DUSP23Q9BVJ7 150 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 GLS2Q9UI32 602 aa18.87■□□□□ 0.61
SNX3-201ENST00000230085 DCHS1Q96JQ0 3298 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms