RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 RP2O75695 350 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 LIPCP11150 499 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 RFC3P40938 356 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 GIPRP48546 466 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 ARL6IP1Q15041 203 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 ELAVL1Q15717 326 aaKnown RBP17.08■□□□□ 0.32
CLIP2-201ENST00000223398 EXOSC6Q5RKV6 272 aaKnown RBP17.08■□□□□ 0.32
CLIP2-201ENST00000223398 GPR157Q5UAW9 335 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 COMTD1Q86VU5 262 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 RSPRY1Q96DX4 576 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 DAPP1Q9UN19 280 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 WDR37Q9Y2I8 494 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 GLB1L2Q8IW92 636 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 ACBD4Q8NC06 268 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 GOT1L1Q8NHS2 421 aaPredicted RBP17.08■□□□□ 0.32
CLIP2-201ENST00000223398 C1orf198Q9H425 327 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 LSM5Q9Y4Y9 91 aaKnown RBP17.08■□□□□ 0.32
CLIP2-201ENST00000223398 OR51B4Q9Y5P0 310 aa17.08■□□□□ 0.32
CLIP2-201ENST00000223398 LPLP06858 475 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 EIF2S3P41091 472 aaKnown RBP17.07■□□□□ 0.32
CLIP2-201ENST00000223398 OR5D18Q8NGL1 313 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 NPFFR2Q9Y5X5 522 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 TARM1B6A8C7 271 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 AKR7A3O95154 331 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 IGLV3-25P01717 112 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 MAKP20794 623 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 C21orf33P30042 268 aaPredicted RBP17.07■□□□□ 0.32
CLIP2-201ENST00000223398 EPHA5P54756 1037 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 SMN1Q16637 294 aaKnown RBP17.07■□□□□ 0.32
CLIP2-201ENST00000223398 OR2G6Q5TZ20 316 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF836Q6ZNA1 936 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 LILRB2Q8N423 598 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 CCDC71LQ8N9Z2 235 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 UCN3Q969E3 161 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 TMIGD2Q96BF3 282 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF587Q96SQ5 575 aaPredicted RBP17.07■□□□□ 0.32
CLIP2-201ENST00000223398 CR2P20023 1033 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 NR4A2P43354 598 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 GLYR1Q49A26 553 aaPredicted RBP17.07■□□□□ 0.32
CLIP2-201ENST00000223398 FAM71E1Q6IPT2 247 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 HAGHLQ6PII5 290 aaPredicted RBP17.07■□□□□ 0.32
CLIP2-201ENST00000223398 ALG12Q9BV10 488 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 ANKRD60Q9BZ19 345 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 EVA1AQ9H8M9 152 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 RAB9BQ9NP90 201 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 DECR2Q9NUI1 292 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 MAP1BP46821 2468 aaKnown RBP17.07■□□□□ 0.32
CLIP2-201ENST00000223398 B4DXG7 233 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 RAB3DO95716 219 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 IFNA2P01563 188 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 FCGR2AP12318 317 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 EIF1P41567 113 aaKnown RBP17.07■□□□□ 0.32
CLIP2-201ENST00000223398 EFNA3P52797 238 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 RAB15P59190 212 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 PXKQ7Z7A4 578 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 OR11L1Q8NGX0 322 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 ARSGQ96EG1 525 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 APMAPQ9HDC9 416 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 HAO2Q9NYQ3 351 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 TAS2R8Q9NYW2 309 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 PAPPA2Q9BXP8 1791 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 GLB1P16278 677 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 CAPZBP47756 277 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 GK3PQ14409 553 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF181Q2M3W8 571 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 NEURL3Q96EH8 262 aa17.07■□□□□ 0.32
CLIP2-201ENST00000223398 METTL12A8MUP2 240 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 CCL7P80098 99 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 CNIH2Q6PI25 160 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 SYT13Q7L8C5 426 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 SPAG16Q8N0X2 631 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF808Q8N4W9 903 aaPredicted RBP17.06■□□□□ 0.32
CLIP2-201ENST00000223398 LYRM4Q9HD34 91 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 METTL15A6NJ78 407 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 LCMT2O60294 686 aaKnown RBP17.06■□□□□ 0.32
CLIP2-201ENST00000223398 PIP5K1CO60331 668 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 IL2RGP31785 369 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 CAV2P51636 162 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 DUSP5Q16690 384 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 BAHD1Q8TBE0 780 aaPredicted RBP17.06■□□□□ 0.32
CLIP2-201ENST00000223398 PSMF1Q92530 271 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 MENTQ9BUN1 341 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 GOSR2O14653 212 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF684Q5T5D7 378 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 MBOAT2Q6ZWT7 520 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 SIMC1Q8NDZ2 872 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 CNOT9Q92600 299 aaKnown RBP17.06■□□□□ 0.32
CLIP2-201ENST00000223398 FGF17O60258 216 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 OR7C1O76099 320 aaPredicted RBP17.06■□□□□ 0.32
CLIP2-201ENST00000223398 IL9P15248 144 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 RNF113BQ8IZP6 322 aaKnown RBP17.06■□□□□ 0.32
CLIP2-201ENST00000223398 CHDHQ8NE62 594 aaPredicted RBP17.06■□□□□ 0.32
CLIP2-201ENST00000223398 OR5T1Q8NG75 326 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 OR13C9Q8NGT0 318 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF583Q96ND8 569 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 TMEM165Q9HC07 324 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 BABAM2Q9NXR7 383 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 V9GY05 133 aa17.06■□□□□ 0.32
CLIP2-201ENST00000223398 CEACAM5P06731 702 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 DNASE1P24855 282 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms