RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CA13Q8N1Q1 262 aa15.85■□□□□ 0.13
USB1-201ENST00000219281 ZNF527Q8NB42 609 aa15.85■□□□□ 0.13
USB1-201ENST00000219281 PMM1Q92871 262 aa15.85■□□□□ 0.13
USB1-201ENST00000219281 SLC25A18Q9H1K4 315 aa15.85■□□□□ 0.13
USB1-201ENST00000219281 POLE3Q9NRF9 147 aa15.85■□□□□ 0.13
USB1-201ENST00000219281 POT1Q9NUX5 634 aa15.85■□□□□ 0.13
USB1-201ENST00000219281 WSB2Q9NYS7 404 aaPredicted RBP15.85■□□□□ 0.13
USB1-201ENST00000219281 SCP2D1Q9UJQ7 156 aa15.85■□□□□ 0.13
USB1-201ENST00000219281 RCE1Q9Y256 329 aa15.85■□□□□ 0.13
USB1-201ENST00000219281 RNF215Q9Y6U7 377 aa15.85■□□□□ 0.13
USB1-201ENST00000219281 IDSB3KWA1 339 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 PSMD9O00233 223 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 SHOXO15266 292 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 RASGRP1O95267 797 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 KLF8O95600 359 aaPredicted RBP15.84■□□□□ 0.13
USB1-201ENST00000219281 HOXB2P14652 356 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 LTBRP36941 435 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 MAGEB1P43366 347 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 LSSP48449 732 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 SELENOPP49908 381 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 CCR9P51686 369 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 VSX2P58304 361 aaPredicted RBP15.84■□□□□ 0.13
USB1-201ENST00000219281 HSF2Q03933 536 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 HTR4Q13639 388 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 GPR18Q14330 331 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 GGTLC2Q14390 218 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 TMEM255AQ5JRV8 349 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 OR14A16Q8NHC5 309 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 ANKRD9Q96BM1 317 aaPredicted RBP15.84■□□□□ 0.13
USB1-201ENST00000219281 CTHRC1Q96CG8 243 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 NMNAT3Q96T66 252 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 GFI1Q99684 422 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 ENTPD2Q9Y5L3 495 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 ACOD1A6NK06 481 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 PIN1P1O15428 100 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 PEX14O75381 377 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 TOXO94900 526 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 MPC2O95563 127 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 RPL4P36578 427 aaKnown RBP15.84■□□□□ 0.13
USB1-201ENST00000219281 SNTA1Q13424 505 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 EXOSC2Q13868 293 aaKnown RBP15.84■□□□□ 0.13
USB1-201ENST00000219281 FAM53BQ14153 422 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 GXYLT1Q4G148 440 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 SMUG1Q53HV7 270 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 FAM199XQ6PEV8 388 aaPredicted RBP15.84■□□□□ 0.13
USB1-201ENST00000219281 KIRREL2Q6UWL6 708 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 UNQ9370/PRO34162Q6UXP9 181 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 SERPINA12Q8IW75 414 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 ZNF433Q8N7K0 673 aaPredicted RBP15.84■□□□□ 0.13
USB1-201ENST00000219281 PIGKQ92643 395 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 MFRPQ9BY79 579 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 ZNF436Q9C0F3 470 aaPredicted RBP15.84■□□□□ 0.13
USB1-201ENST00000219281 CDCP1Q9H5V8 836 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 NARFLQ9H6Q4 476 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 HRASLSQ9HDD0 168 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 EVA1BQ9NVM1 165 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 ANKRD10Q9NXR5 420 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 AUP1Q9Y679 476 aa15.84■□□□□ 0.13
USB1-201ENST00000219281 ZNF879B4DU55 563 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 DIO1P49895 249 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 KIAA1024LP59773 190 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 PSG6Q00889 435 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 NLRC3Q7RTR2 1065 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 GRAMD2AQ8IUY3 354 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 OR11G2Q8NGC1 345 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 OR6K6Q8NGW6 343 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 OR2T35Q8NGX2 323 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 ZPLD1Q8TCW7 415 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 SGTBQ96EQ0 304 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 HSPA12BQ96MM6 686 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 DHRS9Q9BPW9 319 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 OR10A4Q9H209 315 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 CLEC4MQ9H2X3 399 aaPredicted RBP15.83■□□□□ 0.13
USB1-201ENST00000219281 METTL17Q9H7H0 456 aaPredicted RBP15.83■□□□□ 0.13
USB1-201ENST00000219281 C2orf42Q9NWW7 574 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 RPS6KB2Q9UBS0 482 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 PCOLCE2Q9UKZ9 415 aa15.83■□□□□ 0.13
USB1-201ENST00000219281 KHNYNO15037 678 aaKnown RBP15.83■□□□□ 0.12
USB1-201ENST00000219281 OR10H2O60403 315 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 GALR3O60755 368 aaPredicted RBP15.83■□□□□ 0.12
USB1-201ENST00000219281 GRPRP30550 384 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 LGALS3BPQ08380 585 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 NFATC4Q14934 902 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 GPR139Q6DWJ6 353 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 ULK3Q6PHR2 472 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 LINC00114Q6XXX2 140 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 Q6ZTK2 550 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 FCRLAQ7L513 359 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 SLC43A2Q8N370 569 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 LSMEM1Q8N8F7 131 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 OR52I2Q8NH67 350 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 CEP76Q8TAP6 659 aa15.83■□□□□ 0.12
USB1-201ENST00000219281 MKKSQ9NPJ1 570 aaPredicted RBP15.83■□□□□ 0.12
USB1-201ENST00000219281 PDGFAP04085 211 aa15.82■□□□□ 0.12
USB1-201ENST00000219281 CD1AP06126 327 aa15.82■□□□□ 0.12
USB1-201ENST00000219281 HOXD11P31277 338 aaPredicted RBP15.82■□□□□ 0.12
USB1-201ENST00000219281 VEGFCP49767 419 aa15.82■□□□□ 0.12
USB1-201ENST00000219281 CLDN12P56749 244 aa15.82■□□□□ 0.12
USB1-201ENST00000219281 SRSF5Q13243 272 aaKnown RBP15.82■□□□□ 0.12
USB1-201ENST00000219281 NDUFAF6Q330K2 333 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms