RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TIGARQ9NQ88 270 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 OAZ3Q9UMX2 235 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 TRAPPC4Q9Y296 219 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 IGHV3-15A0A0B4J1V0 119 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 FUT1P19526 365 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 KLK2P20151 261 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 PRKACGP22612 351 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 OMPP47874 163 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 SLC35A1P78382 337 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 PGBD2Q6P3X8 592 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 SLC46A3Q7Z3Q1 461 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 ZER1Q7Z7L7 766 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 CDK20Q8IZL9 346 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 LRRC17Q8N6Y2 441 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 AQP11Q8NBQ7 271 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 C6orf203Q9P0P8 240 aaPredicted RBP24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 SEC14L4Q9UDX3 406 aa24.42■■□□□ 1.5
CHMP4B-201ENST00000217402 CLCA1A8K7I4 914 aa24.41■■□□□ 1.5
CHMP4B-201ENST00000217402 OR7A10O76100 309 aa24.41■■□□□ 1.5
CHMP4B-201ENST00000217402 SAGP10523 405 aaPredicted RBP24.41■■□□□ 1.5
CHMP4B-201ENST00000217402 GRPRP30550 384 aa24.41■■□□□ 1.5
CHMP4B-201ENST00000217402 IFNGR2P38484 337 aa24.41■■□□□ 1.5
CHMP4B-201ENST00000217402 RAC3P60763 192 aa24.41■■□□□ 1.5
CHMP4B-201ENST00000217402 ZNF770Q6IQ21 691 aaPredicted RBP24.41■■□□□ 1.5
CHMP4B-201ENST00000217402 LINC00471Q8N535 108 aa24.41■■□□□ 1.5
CHMP4B-201ENST00000217402 NANSQ9NR45 359 aa24.41■■□□□ 1.5
CHMP4B-201ENST00000217402 SH3BGRL2Q9UJC5 107 aa24.41■■□□□ 1.5
CHMP4B-201ENST00000217402 TMEM5Q9Y2B1 443 aa24.41■■□□□ 1.5
CHMP4B-201ENST00000217402 CHD6Q8TD26 2715 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 EFCAB9A8MZ26 197 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 G3V2T6 193 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 PRRG2O14669 202 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 AKR7A3O95154 331 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 MT-ATP6P00846 226 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 IGF2P01344 180 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 POU2F1P14859 743 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 PON3Q15166 354 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 C3P1Q6ZMU1 363 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 ZDHHC13Q8IUH4 622 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 OR6S1Q8NH40 331 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 CPNE4Q96A23 557 aaPredicted RBP24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 UCN2Q96RP3 112 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 TRIB1Q96RU8 372 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 GPA33Q99795 319 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 FKRPQ9H9S5 495 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 PAQR5Q9NXK6 330 aaPredicted RBP24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 ZNF835Q9Y2P0 537 aa24.4■■□□□ 1.5
CHMP4B-201ENST00000217402 FIGNL2A6NMB9 653 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 KDM4EB2RXH2 506 aaPredicted RBP24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 M0R082 166 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 CDC42EP2O14613 210 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 GASTP01350 101 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 NUP107P57740 925 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 MRPL49Q13405 166 aaKnown RBP24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 ZNF239Q16600 458 aaKnown RBP24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 MAMDC2Q7Z304 686 aaPredicted RBP24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 STK32CQ86UX6 486 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 HIPK1Q86Z02 1210 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 ZNF417Q8TAU3 575 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 ZPLD1Q8TCW7 415 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 ROBO4Q8WZ75 1007 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 ZHX1-C8orf76Q96EF9 292 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 ZNF587Q96SQ5 575 aaPredicted RBP24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 FEVQ99581 238 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 ASPNQ9BXN1 380 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 STX18Q9P2W9 335 aaKnown RBP24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 NKX1-2Q9UD57 310 aaPredicted RBP24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 TINAGQ9UJW2 476 aa24.39■■□□□ 1.5
CHMP4B-201ENST00000217402 FAM208BQ5VWN6 2430 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 MGRN1O60291 552 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 SYNGR4O95473 234 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 ENPP1P22413 925 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 IGFBP7Q16270 282 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 ACSF3Q4G176 576 aaPredicted RBP24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 OTUD3Q5T2D3 398 aaPredicted RBP24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 TMPRSS11FQ6ZWK6 438 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 EPHX4Q8IUS5 362 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 SVOPLQ8N434 492 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 OR13C2Q8NGS9 318 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 FNDC9Q8TBE3 224 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 GTPBP3Q969Y2 492 aaKnown RBP24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 SDCCAG3Q96C92 435 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 NRBF2Q96F24 287 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 CIB1Q99828 191 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 ZNF229Q9UJW7 825 aa24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 MCTS1Q9ULC4 181 aaKnown RBP24.39■■□□□ 1.49
CHMP4B-201ENST00000217402 AHRRA9YTQ3 701 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 ZNF814B7Z6K7 855 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 PDLIM1O00151 329 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 SMAD9O15198 467 aaKnown RBP24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 WDR1O75083 606 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 MFSD13AQ14CX5 517 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 ANKRD34AQ69YU3 496 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 C1orf94Q6P1W5 598 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 RPTNQ6XPR3 784 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 DOLPP1Q86YN1 238 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 TMEM99Q8N816 258 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 PRRG4Q9BZD6 226 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 RNPEPL1Q9HAU8 725 aa24.38■■□□□ 1.49
CHMP4B-201ENST00000217402 HTR3EA5X5Y0 456 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms