RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 LINC00518Q8N0U6 118 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 PNLDC1Q8NA58 520 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 OR4K13Q8NH42 304 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 WDR92Q96MX6 357 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF251Q9BRH9 671 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 ACSS1Q9NUB1 689 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 TAS2R8Q9NYW2 309 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 CPNE7Q9UBL6 633 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 PCDHGA9Q9Y5G4 932 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 A0A0B4J2A0 478 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 A0A0D9SG52 128 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 AK4P27144 223 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 IRS1P35568 1242 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 HAAOP46952 286 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 GXYLT1Q4G148 440 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 ABCA11PQ4W5N1 156 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 HIST2H3PS2Q5TEC6 136 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 BCDIN3DQ7Z5W3 292 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 OR4F15Q8NGB8 312 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 OR52E2Q8NGJ4 325 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 TSACCQ96A04 125 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 CMSS1Q9BQ75 279 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 TMEM38AQ9H6F2 299 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 DDX31Q9H8H2 851 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 POLMQ9NP87 494 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 SHPKQ9UHJ6 478 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 CLEC2DQ9UHP7 191 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 PURGQ9UJV8 347 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 SLC7A7Q9UM01 511 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 EFCAB7A8K855 629 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 GPR89AB7ZAQ6 455 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF878C9JN71 531 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 LILRB3O75022 631 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 EFEMP2O95967 443 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 SCG5P05408 212 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 GPR89BP0CG08 455 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 CEBPBP17676 345 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 C5AR1P21730 350 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 HOXA9P31269 272 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 GDNFP39905 211 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 FABP9Q0Z7S8 132 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 TRAM1Q15629 374 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 ALG10BQ5I7T1 473 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 MRPL38Q96DV4 380 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 ALG8Q9BVK2 526 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 OR8D2Q9GZM6 311 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 PRO1933Q9H354 126 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 EGLN3Q9H6Z9 239 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 MED16Q9Y2X0 877 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 TRBV5-4A0A0C4DH59 114 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 TMEM72A0PK05 275 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 GABRB1P18505 474 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 POU3F3P20264 500 aaPredicted RBP11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 SEC61A1P61619 476 aaKnown RBP11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 PIP5KL1Q5T9C9 394 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 OR10K2Q6IF99 312 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 KIAA1211LQ6NV74 962 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 SLC16A12Q6ZSM3 486 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 OR6V1Q8N148 313 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 SPRYD4Q8WW59 207 aaPredicted RBP11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 TM9SF4Q92544 642 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 HS6ST2Q96MM7 605 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 TAPBPLQ9BX59 468 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 TINAGL1Q9GZM7 467 aaPredicted RBP11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 SRRQ9GZT4 340 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 TOLLIPQ9H0E2 274 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 VNN3Q9NY84 501 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF226Q9NYT6 803 aa11.27□□□□□ -0.6
TSPAN9-201ENST00000011898 MN1Q10571 1320 aaPredicted RBP11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 GLP1RP43220 463 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 SLC6A11P48066 632 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 AMZ1Q400G9 498 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF600Q6ZNG1 722 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 ARL14Q8N4G2 192 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 NEK7Q8TDX7 302 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 TAAR8Q969N4 342 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 KIAA1143Q96AT1 154 aaPredicted RBP11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 LIN37Q96GY3 246 aaPredicted RBP11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 SCGB3A2Q96PL1 93 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 SRA1Q9HD15 236 aaKnown RBP11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 DNMT3BQ9UBC3 853 aaKnown RBP11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 TMEM265A0A087WTH1 108 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 BHLHE40O14503 412 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 KHNYNO15037 678 aaKnown RBP11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 SPI1P17947 270 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 KCNJ10P78508 379 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 FAM71E1Q6IPT2 247 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 FIGLAQ6QHK4 219 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 VRK2Q86Y07 508 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 HPSE2Q8WWQ2 592 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 METTL21AQ8WXB1 218 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 TTC9Q92623 222 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 SMIM3Q9BZL3 60 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 GRHPRQ9UBQ7 328 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 LAMP5Q9UJQ1 280 aa11.27□□□□□ -0.61
TSPAN9-201ENST00000011898 TCAPO15273 167 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 SIGLEC6O43699 453 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 RAB3DO95716 219 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 NME2P22392 152 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms