RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SYNE4Q8N205 404 aa20.95■□□□□ 0.94
PHGDH-208ENST00000641023 AK7Q96M32 723 aa20.95■□□□□ 0.94
PHGDH-208ENST00000641023 CEP126Q9P2H0 1117 aa20.95■□□□□ 0.94
PHGDH-208ENST00000641023 K7ELQ4 463 aaPredicted RBP20.95■□□□□ 0.94
PHGDH-208ENST00000641023 NEUROD6Q96NK8 337 aa20.95■□□□□ 0.94
PHGDH-208ENST00000641023 CCDC85AQ96PX6 553 aaPredicted RBP20.95■□□□□ 0.94
PHGDH-208ENST00000641023 DBNDD2Q9BQY9 259 aa20.95■□□□□ 0.94
PHGDH-208ENST00000641023 ANTXR1Q9H6X2 564 aa20.95■□□□□ 0.94
PHGDH-208ENST00000641023 ZNF652Q9Y2D9 606 aa20.95■□□□□ 0.94
PHGDH-208ENST00000641023 ST18O60284 1047 aa20.94■□□□□ 0.94
PHGDH-208ENST00000641023 SPRYD3Q8NCJ5 442 aa20.94■□□□□ 0.94
PHGDH-208ENST00000641023 IL25Q9H293 177 aa20.94■□□□□ 0.94
PHGDH-208ENST00000641023 LINC00116Q8NCU8 138 aa20.93■□□□□ 0.94
PHGDH-208ENST00000641023 PUS3Q9BZE2 481 aaKnown RBP20.93■□□□□ 0.94
PHGDH-208ENST00000641023 MYH14Q7Z406 1995 aaKnown RBP20.93■□□□□ 0.94
PHGDH-208ENST00000641023 ATRNO75882 1429 aa20.93■□□□□ 0.94
PHGDH-208ENST00000641023 ANKRD18BA2A2Z9 1011 aa20.93■□□□□ 0.94
PHGDH-208ENST00000641023 ITGA6P23229 1130 aa20.93■□□□□ 0.94
PHGDH-208ENST00000641023 FSD1Q9BTV5 496 aa20.93■□□□□ 0.94
PHGDH-208ENST00000641023 UTP14AQ9BVJ6 771 aaKnown RBP20.93■□□□□ 0.94
PHGDH-208ENST00000641023 AKAP2Q9Y2D5 859 aa20.93■□□□□ 0.94
PHGDH-208ENST00000641023 SH3TC1Q8TE82 1336 aa20.93■□□□□ 0.94
PHGDH-208ENST00000641023 CNTNAP4Q9C0A0 1308 aa20.93■□□□□ 0.94
PHGDH-208ENST00000641023 CD2BP2O95400 341 aaKnown RBP20.92■□□□□ 0.94
PHGDH-208ENST00000641023 SUSD4Q5VX71 490 aa20.92■□□□□ 0.94
PHGDH-208ENST00000641023 CLEC4GQ6UXB4 293 aa20.92■□□□□ 0.94
PHGDH-208ENST00000641023 COL5A3P25940 1745 aaPredicted RBP20.92■□□□□ 0.94
PHGDH-208ENST00000641023 HSP90B1P14625 803 aaKnown RBP20.92■□□□□ 0.94
PHGDH-208ENST00000641023 TIMM10P62072 90 aa20.92■□□□□ 0.94
PHGDH-208ENST00000641023 PTF1AQ7RTS3 328 aa20.92■□□□□ 0.94
PHGDH-208ENST00000641023 GREM2Q9H772 168 aa20.92■□□□□ 0.94
PHGDH-208ENST00000641023 RAD50Q92878 1312 aa20.91■□□□□ 0.94
PHGDH-208ENST00000641023 A0A1B0GUL7 405 aa20.91■□□□□ 0.94
PHGDH-208ENST00000641023 HSP90AA1P07900 732 aaKnown RBP20.91■□□□□ 0.94
PHGDH-208ENST00000641023 FAM182BQ5T319 152 aa20.91■□□□□ 0.94
PHGDH-208ENST00000641023 NIP7Q9Y221 180 aaKnown RBP eCLIP20.91■□□□□ 0.94
PHGDH-208ENST00000641023 HSPA4P34932 840 aa20.9■□□□□ 0.94
PHGDH-208ENST00000641023 RC3H1Q5TC82 1133 aaKnown RBP20.9■□□□□ 0.94
PHGDH-208ENST00000641023 LDHAL6AQ6ZMR3 332 aa20.9■□□□□ 0.94
PHGDH-208ENST00000641023 SEPT12Q8IYM1 358 aa20.9■□□□□ 0.94
PHGDH-208ENST00000641023 HAUS7Q99871 368 aa20.9■□□□□ 0.94
PHGDH-208ENST00000641023 LSG1Q9H089 658 aaKnown RBP20.9■□□□□ 0.94
PHGDH-208ENST00000641023 NHSQ6T4R5 1651 aa20.89■□□□□ 0.94
PHGDH-208ENST00000641023 IL27Q8NEV9 243 aa20.89■□□□□ 0.93
PHGDH-208ENST00000641023 IL17RAQ96F46 866 aa20.89■□□□□ 0.93
PHGDH-208ENST00000641023 QTRT2Q9H974 415 aaKnown RBP20.89■□□□□ 0.93
PHGDH-208ENST00000641023 ZNF609O15014 1411 aa20.89■□□□□ 0.93
PHGDH-208ENST00000641023 KCNQ4P56696 695 aa20.89■□□□□ 0.93
PHGDH-208ENST00000641023 NFKBIBQ15653 356 aa20.89■□□□□ 0.93
PHGDH-208ENST00000641023 RGL2O15211 777 aa20.88■□□□□ 0.93
PHGDH-208ENST00000641023 DNAJC2Q99543 621 aaKnown RBP20.88■□□□□ 0.93
PHGDH-208ENST00000641023 CHMP5Q9NZZ3 219 aa20.88■□□□□ 0.93
PHGDH-208ENST00000641023 CCNL1Q9UK58 526 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-208ENST00000641023 PALD1Q9ULE6 856 aa20.88■□□□□ 0.93
PHGDH-208ENST00000641023 FAM177BA6PVY3 158 aa20.87■□□□□ 0.93
PHGDH-208ENST00000641023 CNNM1Q9NRU3 951 aa20.87■□□□□ 0.93
PHGDH-208ENST00000641023 RIPOR2Q9Y4F9 1068 aa20.87■□□□□ 0.93
PHGDH-208ENST00000641023 BTAF1O14981 1849 aa20.87■□□□□ 0.93
PHGDH-208ENST00000641023 NEK4P51957 841 aa20.87■□□□□ 0.93
PHGDH-208ENST00000641023 NMIQ13287 307 aaPredicted RBP20.87■□□□□ 0.93
PHGDH-208ENST00000641023 CCDC158Q5M9N0 1113 aa20.87■□□□□ 0.93
PHGDH-208ENST00000641023 MYH3P11055 1940 aa20.87■□□□□ 0.93
PHGDH-208ENST00000641023 RPS6KA4O75676 772 aa20.86■□□□□ 0.93
PHGDH-208ENST00000641023 METTL24Q5JXM2 366 aa20.86■□□□□ 0.93
PHGDH-208ENST00000641023 FAM227BQ96M60 508 aa20.86■□□□□ 0.93
PHGDH-208ENST00000641023 RFX7Q2KHR2 1363 aa20.86■□□□□ 0.93
PHGDH-208ENST00000641023 HCLS1P14317 486 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-208ENST00000641023 GORABQ5T7V8 394 aa20.85■□□□□ 0.93
PHGDH-208ENST00000641023 TICAM2Q86XR7 235 aa20.85■□□□□ 0.93
PHGDH-208ENST00000641023 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.85■□□□□ 0.93
PHGDH-208ENST00000641023 EDC3Q96F86 508 aaKnown RBP20.85■□□□□ 0.93
PHGDH-208ENST00000641023 SNRKQ9NRH2 765 aa20.85■□□□□ 0.93
PHGDH-208ENST00000641023 NTSR2O95665 410 aa20.85■□□□□ 0.93
PHGDH-208ENST00000641023 MCM2P49736 904 aa20.85■□□□□ 0.93
PHGDH-208ENST00000641023 IFIT1P09914 478 aaKnown RBP20.84■□□□□ 0.93
PHGDH-208ENST00000641023 CCDC152Q4G0S7 254 aa20.84■□□□□ 0.93
PHGDH-208ENST00000641023 KBTBD3Q8NAB2 608 aa20.84■□□□□ 0.93
PHGDH-208ENST00000641023 XAGE2Q96GT9 111 aa20.84■□□□□ 0.93
PHGDH-208ENST00000641023 PAG1Q9NWQ8 432 aa20.84■□□□□ 0.93
PHGDH-208ENST00000641023 CCDC171Q6TFL3 1326 aa20.83■□□□□ 0.93
PHGDH-208ENST00000641023 A0A0D9SFI3 127 aa20.83■□□□□ 0.93
PHGDH-208ENST00000641023 BCL11BQ9C0K0 894 aaPredicted RBP20.83■□□□□ 0.93
PHGDH-208ENST00000641023 RTCBQ9Y3I0 505 aaKnown RBP20.83■□□□□ 0.93
PHGDH-208ENST00000641023 NDUFB9Q9Y6M9 179 aa20.83■□□□□ 0.93
PHGDH-208ENST00000641023 GNPATO15228 680 aa20.82■□□□□ 0.92
PHGDH-208ENST00000641023 DDX46Q7L014 1031 aaKnown RBP20.82■□□□□ 0.92
PHGDH-208ENST00000641023 NARFQ9UHQ1 456 aa20.82■□□□□ 0.92
PHGDH-208ENST00000641023 CIZ1Q9ULV3 898 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-208ENST00000641023 DDIT3P35638 169 aa20.82■□□□□ 0.92
PHGDH-208ENST00000641023 PTH1RQ03431 593 aa20.82■□□□□ 0.92
PHGDH-208ENST00000641023 ATP2B3Q16720 1220 aa20.82■□□□□ 0.92
PHGDH-208ENST00000641023 TTC39AQ5SRH9 613 aa20.82■□□□□ 0.92
PHGDH-208ENST00000641023 BCORQ6W2J9 1755 aa20.82■□□□□ 0.92
PHGDH-208ENST00000641023 MROH5Q6ZUA9 1318 aa20.81■□□□□ 0.92
PHGDH-208ENST00000641023 GOLIM4O00461 696 aa20.81■□□□□ 0.92
PHGDH-208ENST00000641023 PDE8BO95263 885 aa20.81■□□□□ 0.92
PHGDH-208ENST00000641023 MAP4K1Q92918 833 aa20.81■□□□□ 0.92
PHGDH-208ENST00000641023 SNX14Q9Y5W7 946 aa20.81■□□□□ 0.92
PHGDH-208ENST00000641023 RIC1Q4ADV7 1423 aa20.81■□□□□ 0.92
PHGDH-208ENST00000641023 ZPR1O75312 459 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms