RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 PA2G4Q9UQ80 394 aaKnown RBP22.11■■□□□ 1.13
SPIN3-238ENST00000640421 GTF2E1P29083 439 aaPredicted RBP22.1■■□□□ 1.13
SPIN3-238ENST00000640421 SLC10A5Q5PT55 438 aa22.1■■□□□ 1.13
SPIN3-238ENST00000640421 CHMP3Q9Y3E7 222 aa22.1■■□□□ 1.13
SPIN3-238ENST00000640421 GREM2Q9H772 168 aa22.09■■□□□ 1.13
SPIN3-238ENST00000640421 EXOC6BQ9Y2D4 811 aa22.09■■□□□ 1.13
SPIN3-238ENST00000640421 SKAP1Q86WV1 359 aa22.09■■□□□ 1.13
SPIN3-238ENST00000640421 PTPN12Q05209 780 aaKnown RBP22.08■■□□□ 1.13
SPIN3-238ENST00000640421 COL4A1P02462 1669 aa22.08■■□□□ 1.12
SPIN3-238ENST00000640421 GCC1Q96CN9 775 aa22.07■■□□□ 1.12
SPIN3-238ENST00000640421 NPHP1O15259 732 aa22.07■■□□□ 1.12
SPIN3-238ENST00000640421 GOLGB1Q14789 3259 aaKnown RBP22.06■■□□□ 1.12
SPIN3-238ENST00000640421 PSDA5PKW4 1024 aaPredicted RBP22.06■■□□□ 1.12
SPIN3-238ENST00000640421 ZNF594Q96JF6 807 aaPredicted RBP22.06■■□□□ 1.12
SPIN3-238ENST00000640421 ANKRD31Q8N7Z5 1873 aa22.06■■□□□ 1.12
SPIN3-238ENST00000640421 SURF6O75683 361 aaKnown RBP22.05■■□□□ 1.12
SPIN3-238ENST00000640421 SLC16A10Q8TF71 515 aa22.05■■□□□ 1.12
SPIN3-238ENST00000640421 NOP58Q9Y2X3 529 aaKnown RBP22.05■■□□□ 1.12
SPIN3-238ENST00000640421 PARP3Q9Y6F1 533 aa22.05■■□□□ 1.12
SPIN3-238ENST00000640421 RIC1Q4ADV7 1423 aa22.05■■□□□ 1.12
SPIN3-238ENST00000640421 SRCAPQ6ZRS2 3230 aa22.05■■□□□ 1.12
SPIN3-238ENST00000640421 APBB1O00213 710 aa22.05■■□□□ 1.12
SPIN3-238ENST00000640421 ITGA6P23229 1130 aa22.05■■□□□ 1.12
SPIN3-238ENST00000640421 SIL1Q9H173 461 aa22.05■■□□□ 1.12
SPIN3-238ENST00000640421 COPRSQ9NQ92 184 aa22.05■■□□□ 1.12
SPIN3-238ENST00000640421 SEC31BQ9NQW1 1179 aa22.05■■□□□ 1.12
SPIN3-238ENST00000640421 TAF1P21675 1872 aa22.04■■□□□ 1.12
SPIN3-238ENST00000640421 ZBTB7AO95365 584 aa22.04■■□□□ 1.12
SPIN3-238ENST00000640421 HSP90B1P14625 803 aaKnown RBP22.04■■□□□ 1.12
SPIN3-238ENST00000640421 SF3B3Q15393 1217 aaKnown RBP22.04■■□□□ 1.12
SPIN3-238ENST00000640421 CCDC57Q2TAC2 916 aa22.04■■□□□ 1.12
SPIN3-238ENST00000640421 PDZRN3Q9UPQ7 1066 aa22.04■■□□□ 1.12
SPIN3-238ENST00000640421 IFIT5Q13325 482 aaKnown RBP22.03■■□□□ 1.12
SPIN3-238ENST00000640421 CCDC152Q4G0S7 254 aa22.03■■□□□ 1.12
SPIN3-238ENST00000640421 ST5P78524 1137 aa22.03■■□□□ 1.12
SPIN3-238ENST00000640421 NUCB1Q02818 461 aa22.03■■□□□ 1.12
SPIN3-238ENST00000640421 NLRP3Q96P20 1036 aa22.03■■□□□ 1.12
SPIN3-238ENST00000640421 RTL9Q8NET4 1388 aa22.03■■□□□ 1.12
SPIN3-238ENST00000640421 SMARCA5O60264 1052 aaPredicted RBP22.01■■□□□ 1.11
SPIN3-238ENST00000640421 ANKRD45Q5TZF3 282 aa22.01■■□□□ 1.11
SPIN3-238ENST00000640421 PUS3Q9BZE2 481 aaKnown RBP22.01■■□□□ 1.11
SPIN3-238ENST00000640421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.01■■□□□ 1.11
SPIN3-238ENST00000640421 LRP5O75197 1615 aa22.01■■□□□ 1.11
SPIN3-238ENST00000640421 ANKRD18BA2A2Z9 1011 aa22■■□□□ 1.11
SPIN3-238ENST00000640421 LRRC24Q50LG9 513 aa22■■□□□ 1.11
SPIN3-238ENST00000640421 ATG9AQ7Z3C6 839 aa22■■□□□ 1.11
SPIN3-238ENST00000640421 LNPKQ9C0E8 428 aa22■■□□□ 1.11
SPIN3-238ENST00000640421 SPEF2Q9C093 1822 aa22■■□□□ 1.11
SPIN3-238ENST00000640421 SASH1O94885 1247 aa21.99■■□□□ 1.11
SPIN3-238ENST00000640421 CHD1LQ86WJ1 897 aa21.99■■□□□ 1.11
SPIN3-238ENST00000640421 ATF5Q9Y2D1 282 aaPredicted RBP21.99■■□□□ 1.11
SPIN3-238ENST00000640421 CRY2Q49AN0 593 aa21.98■■□□□ 1.11
SPIN3-238ENST00000640421 MTFR1LQ9H019 292 aa21.98■■□□□ 1.11
SPIN3-238ENST00000640421 KLRG2A4D1S0 409 aaPredicted RBP21.98■■□□□ 1.11
SPIN3-238ENST00000640421 PDE4AP27815 886 aa21.98■■□□□ 1.11
SPIN3-238ENST00000640421 RHPN1Q8TCX5 695 aa21.98■■□□□ 1.11
SPIN3-238ENST00000640421 BRIP1Q9BX63 1249 aa21.98■■□□□ 1.11
SPIN3-238ENST00000640421 COL11A2P13942 1736 aaPredicted RBP21.97■■□□□ 1.11
SPIN3-238ENST00000640421 RAB11FIP3O75154 756 aa21.97■■□□□ 1.11
SPIN3-238ENST00000640421 G3BP1Q13283 466 aaKnown RBP eCLIP21.97■■□□□ 1.11
SPIN3-238ENST00000640421 OS9Q13438 667 aaPredicted RBP21.97■■□□□ 1.11
SPIN3-238ENST00000640421 LRRCC1Q9C099 1032 aa21.97■■□□□ 1.11
SPIN3-238ENST00000640421 BCL11AQ9H165 835 aa21.97■■□□□ 1.11
SPIN3-238ENST00000640421 EYA2O00167 538 aa21.96■■□□□ 1.11
SPIN3-238ENST00000640421 HSP90AB4PQ58FF6 505 aa21.96■■□□□ 1.11
SPIN3-238ENST00000640421 TAF7LQ5H9L4 462 aa21.96■■□□□ 1.11
SPIN3-238ENST00000640421 CELF1Q92879 486 aaKnown RBP21.96■■□□□ 1.11
SPIN3-238ENST00000640421 IL1RAPL2Q9NP60 686 aa21.96■■□□□ 1.11
SPIN3-238ENST00000640421 CIAO1O76071 339 aa21.95■■□□□ 1.1
SPIN3-238ENST00000640421 C16orf71Q8IYS4 520 aaPredicted RBP21.95■■□□□ 1.1
SPIN3-238ENST00000640421 KIF1BPQ96EK5 621 aa21.95■■□□□ 1.1
SPIN3-238ENST00000640421 LDHAL6AQ6ZMR3 332 aa21.94■■□□□ 1.1
SPIN3-238ENST00000640421 OTUD7AQ8TE49 926 aaPredicted RBP21.94■■□□□ 1.1
SPIN3-238ENST00000640421 RIPOR2Q9Y4F9 1068 aa21.94■■□□□ 1.1
SPIN3-238ENST00000640421 C10orf71Q711Q0 1435 aa21.94■■□□□ 1.1
SPIN3-238ENST00000640421 TFCP2Q12800 502 aa21.94■■□□□ 1.1
SPIN3-238ENST00000640421 SGIP1Q9BQI5 828 aa21.94■■□□□ 1.1
SPIN3-238ENST00000640421 SLC51AQ86UW1 340 aa21.93■■□□□ 1.1
SPIN3-238ENST00000640421 ERC1Q8IUD2 1116 aa21.93■■□□□ 1.1
SPIN3-238ENST00000640421 CDC5LQ99459 802 aaKnown RBP21.93■■□□□ 1.1
SPIN3-238ENST00000640421 IL15P40933 162 aaPredicted RBP21.92■■□□□ 1.1
SPIN3-238ENST00000640421 DDX46Q7L014 1031 aaKnown RBP21.92■■□□□ 1.1
SPIN3-238ENST00000640421 FBXO3Q9UK99 471 aa21.92■■□□□ 1.1
SPIN3-238ENST00000640421 RGS3P49796 1198 aa21.92■■□□□ 1.1
SPIN3-238ENST00000640421 RPGRQ92834 1020 aaKnown RBP21.92■■□□□ 1.1
SPIN3-238ENST00000640421 CNNM1Q9NRU3 951 aa21.92■■□□□ 1.1
SPIN3-238ENST00000640421 SRGNP10124 158 aa21.91■■□□□ 1.1
SPIN3-238ENST00000640421 PDE6BP35913 854 aa21.91■■□□□ 1.1
SPIN3-238ENST00000640421 PTGER2P43116 358 aa21.91■■□□□ 1.1
SPIN3-238ENST00000640421 ANKRD18AQ8IVF6 992 aa21.91■■□□□ 1.1
SPIN3-238ENST00000640421 MPHOSPH8Q99549 860 aa21.91■■□□□ 1.1
SPIN3-238ENST00000640421 HOXA10P31260 410 aaPredicted RBP21.9■■□□□ 1.1
SPIN3-238ENST00000640421 IGHMBP2P38935 993 aaKnown RBP21.9■■□□□ 1.1
SPIN3-238ENST00000640421 RPS8P62241 208 aaKnown RBP21.9■■□□□ 1.1
SPIN3-238ENST00000640421 A0A1B0GUL6 1792 aa21.9■■□□□ 1.1
SPIN3-238ENST00000640421 VGLL2Q8N8G2 317 aa21.9■■□□□ 1.1
SPIN3-238ENST00000640421 KIF13BQ9NQT8 1826 aa21.9■■□□□ 1.1
SPIN3-238ENST00000640421 SALL3Q9BXA9 1300 aa21.89■■□□□ 1.1
SPIN3-238ENST00000640421 GRAPQ13588 217 aa21.89■■□□□ 1.09
SPIN3-238ENST00000640421 GRAPLQ8TC17 118 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms