RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 FLIIQ13045 1269 aa22.67■■□□□ 1.22
PTPN11-207ENST00000639857 CDHR2Q9BYE9 1310 aa22.66■■□□□ 1.22
PTPN11-207ENST00000639857 HSPA6P17066 643 aa22.66■■□□□ 1.22
PTPN11-207ENST00000639857 FSTL1Q12841 308 aa22.66■■□□□ 1.22
PTPN11-207ENST00000639857 SUPT20HQ8NEM7 779 aa22.66■■□□□ 1.22
PTPN11-207ENST00000639857 FZD9O00144 591 aa22.65■■□□□ 1.22
PTPN11-207ENST00000639857 TCERG1O14776 1098 aaKnown RBP22.65■■□□□ 1.22
PTPN11-207ENST00000639857 G2E3Q7L622 706 aa22.65■■□□□ 1.22
PTPN11-207ENST00000639857 JDP2Q8WYK2 163 aa22.65■■□□□ 1.22
PTPN11-207ENST00000639857 L3MBTL3Q96JM7 780 aaPredicted RBP22.65■■□□□ 1.22
PTPN11-207ENST00000639857 RTFDC1Q9BY42 306 aaPredicted RBP22.65■■□□□ 1.22
PTPN11-207ENST00000639857 LTBP1Q14766 1721 aa22.64■■□□□ 1.21
PTPN11-207ENST00000639857 COL4A5P29400 1685 aa22.63■■□□□ 1.21
PTPN11-207ENST00000639857 PDE8AO60658 829 aa22.63■■□□□ 1.21
PTPN11-207ENST00000639857 IGKV5-2P06315 115 aa22.63■■□□□ 1.21
PTPN11-207ENST00000639857 FKBP5Q13451 457 aaPredicted RBP22.63■■□□□ 1.21
PTPN11-207ENST00000639857 RTL5Q5HYW3 569 aaPredicted RBP22.63■■□□□ 1.21
PTPN11-207ENST00000639857 ZNF428Q96B54 188 aa22.63■■□□□ 1.21
PTPN11-207ENST00000639857 DUOX1Q9NRD9 1551 aa22.63■■□□□ 1.21
PTPN11-207ENST00000639857 IQCA1LA6NCM1 817 aa22.62■■□□□ 1.21
PTPN11-207ENST00000639857 NEURL1BA8MQ27 555 aa22.62■■□□□ 1.21
PTPN11-207ENST00000639857 E9PSI1 815 aa22.62■■□□□ 1.21
PTPN11-207ENST00000639857 SMC1BQ8NDV3 1235 aa22.62■■□□□ 1.21
PTPN11-207ENST00000639857 POTECB2RU33 542 aa22.61■■□□□ 1.21
PTPN11-207ENST00000639857 DDNO94850 711 aaPredicted RBP22.61■■□□□ 1.21
PTPN11-207ENST00000639857 CCDC152Q4G0S7 254 aa22.61■■□□□ 1.21
PTPN11-207ENST00000639857 DPP8Q6V1X1 898 aaPredicted RBP22.61■■□□□ 1.21
PTPN11-207ENST00000639857 LARGE2Q8N3Y3 721 aa22.61■■□□□ 1.21
PTPN11-207ENST00000639857 MPNDQ8N594 471 aa22.61■■□□□ 1.21
PTPN11-207ENST00000639857 DNAAF4Q8WXU2 420 aa22.61■■□□□ 1.21
PTPN11-207ENST00000639857 ZNF541Q9H0D2 1346 aa22.6■■□□□ 1.21
PTPN11-207ENST00000639857 GPC2Q8N158 579 aa22.6■■□□□ 1.21
PTPN11-207ENST00000639857 COL4A1P02462 1669 aa22.59■■□□□ 1.21
PTPN11-207ENST00000639857 PPIP5K2O43314 1243 aa22.59■■□□□ 1.21
PTPN11-207ENST00000639857 LINS1Q8NG48 757 aa22.59■■□□□ 1.21
PTPN11-207ENST00000639857 CELF1Q92879 486 aaKnown RBP22.59■■□□□ 1.21
PTPN11-207ENST00000639857 EIF6P56537 245 aaKnown RBP22.58■■□□□ 1.21
PTPN11-207ENST00000639857 RPS8P62241 208 aaKnown RBP22.58■■□□□ 1.21
PTPN11-207ENST00000639857 CWF19L2Q2TBE0 894 aaKnown RBP22.58■■□□□ 1.21
PTPN11-207ENST00000639857 SLC51AQ86UW1 340 aa22.58■■□□□ 1.21
PTPN11-207ENST00000639857 NIM1KQ8IY84 436 aa22.58■■□□□ 1.21
PTPN11-207ENST00000639857 RTL9Q8NET4 1388 aa22.58■■□□□ 1.21
PTPN11-207ENST00000639857 H7C1W4 665 aa22.57■■□□□ 1.2
PTPN11-207ENST00000639857 APLP1P51693 650 aa22.57■■□□□ 1.2
PTPN11-207ENST00000639857 CTSWP56202 376 aa22.57■■□□□ 1.2
PTPN11-207ENST00000639857 KIAA2012Q0VF49 1180 aa22.57■■□□□ 1.2
PTPN11-207ENST00000639857 GCKRQ14397 625 aa22.57■■□□□ 1.2
PTPN11-207ENST00000639857 SPEF2Q9C093 1822 aa22.56■■□□□ 1.2
PTPN11-207ENST00000639857 ADAMTSL1Q8N6G6 1762 aa22.55■■□□□ 1.2
PTPN11-207ENST00000639857 SLFN5Q08AF3 891 aa22.55■■□□□ 1.2
PTPN11-207ENST00000639857 AOC3Q16853 763 aa22.55■■□□□ 1.2
PTPN11-207ENST00000639857 PLA2G12BQ9BX93 195 aa22.55■■□□□ 1.2
PTPN11-207ENST00000639857 CEP350Q5VT06 3117 aa22.54■■□□□ 1.2
PTPN11-207ENST00000639857 UBE3BQ7Z3V4 1068 aa22.54■■□□□ 1.2
PTPN11-207ENST00000639857 CDC5LQ99459 802 aaKnown RBP22.54■■□□□ 1.2
PTPN11-207ENST00000639857 HACL1Q9UJ83 578 aa22.54■■□□□ 1.2
PTPN11-207ENST00000639857 TTLL11Q8NHH1 800 aa22.53■■□□□ 1.2
PTPN11-207ENST00000639857 TAF1DQ9H5J8 278 aaPredicted RBP22.53■■□□□ 1.2
PTPN11-207ENST00000639857 SEC31BQ9NQW1 1179 aa22.53■■□□□ 1.2
PTPN11-207ENST00000639857 PODXL2Q9NZ53 605 aa22.53■■□□□ 1.2
PTPN11-207ENST00000639857 ZNRF3Q9ULT6 936 aa22.53■■□□□ 1.2
PTPN11-207ENST00000639857 CASP7P55210 303 aa22.52■■□□□ 1.2
PTPN11-207ENST00000639857 ANKRD18AQ8IVF6 992 aa22.52■■□□□ 1.2
PTPN11-207ENST00000639857 JARID2Q92833 1246 aaPredicted RBP22.52■■□□□ 1.2
PTPN11-207ENST00000639857 NSFL1CQ9UNZ2 370 aaKnown RBP22.52■■□□□ 1.2
PTPN11-207ENST00000639857 BEND3Q5T5X7 828 aa22.51■■□□□ 1.19
PTPN11-207ENST00000639857 PNMA8AQ86V59 439 aaPredicted RBP22.51■■□□□ 1.19
PTPN11-207ENST00000639857 LDHDQ86WU2 507 aa22.51■■□□□ 1.19
PTPN11-207ENST00000639857 EYA3Q99504 573 aa22.51■■□□□ 1.19
PTPN11-207ENST00000639857 CT47B1P0C2W7 299 aaPredicted RBP22.5■■□□□ 1.19
PTPN11-207ENST00000639857 DIEXFQ68CQ4 756 aaKnown RBP22.5■■□□□ 1.19
PTPN11-207ENST00000639857 TRMT2AQ8IZ69 625 aaKnown RBP22.5■■□□□ 1.19
PTPN11-207ENST00000639857 F6X3S4 739 aa22.49■■□□□ 1.19
PTPN11-207ENST00000639857 LMOD1P29536 600 aaPredicted RBP22.49■■□□□ 1.19
PTPN11-207ENST00000639857 EPHX2P34913 555 aa22.49■■□□□ 1.19
PTPN11-207ENST00000639857 GPSM2P81274 684 aa22.49■■□□□ 1.19
PTPN11-207ENST00000639857 WASHC4Q2M389 1173 aa22.49■■□□□ 1.19
PTPN11-207ENST00000639857 CHADLQ6NUI6 762 aa22.49■■□□□ 1.19
PTPN11-207ENST00000639857 PSME4Q14997 1843 aa22.49■■□□□ 1.19
PTPN11-207ENST00000639857 PTPRCP08575 1304 aa22.49■■□□□ 1.19
PTPN11-207ENST00000639857 ALDH1L1O75891 902 aa22.48■■□□□ 1.19
PTPN11-207ENST00000639857 GREM2Q9H772 168 aa22.48■■□□□ 1.19
PTPN11-207ENST00000639857 POLLQ9UGP5 575 aa22.48■■□□□ 1.19
PTPN11-207ENST00000639857 GJA3Q9Y6H8 435 aa22.48■■□□□ 1.19
PTPN11-207ENST00000639857 SCNN1DP51172 638 aa22.47■■□□□ 1.19
PTPN11-207ENST00000639857 CXCL9Q07325 125 aa22.47■■□□□ 1.19
PTPN11-207ENST00000639857 ALDH1L2Q3SY69 923 aa22.47■■□□□ 1.19
PTPN11-207ENST00000639857 TBC1D16Q8TBP0 767 aa22.47■■□□□ 1.19
PTPN11-207ENST00000639857 CCDC85AQ96PX6 553 aaPredicted RBP22.47■■□□□ 1.19
PTPN11-207ENST00000639857 BSDC1Q9NW68 430 aaPredicted RBP22.47■■□□□ 1.19
PTPN11-207ENST00000639857 XDHP47989 1333 aa22.47■■□□□ 1.19
PTPN11-207ENST00000639857 C6orf229H3BNL8 230 aa22.46■■□□□ 1.19
PTPN11-207ENST00000639857 CSF1RP07333 972 aa22.46■■□□□ 1.19
PTPN11-207ENST00000639857 TNIP1Q15025 636 aa22.46■■□□□ 1.19
PTPN11-207ENST00000639857 CIAPIN1Q6FI81 312 aa22.46■■□□□ 1.19
PTPN11-207ENST00000639857 MRPL50Q8N5N7 158 aaKnown RBP22.46■■□□□ 1.19
PTPN11-207ENST00000639857 CDCA7LQ96GN5 454 aa22.46■■□□□ 1.19
PTPN11-207ENST00000639857 ANKIB1Q9P2G1 1089 aa22.46■■□□□ 1.19
PTPN11-207ENST00000639857 GGA1Q9UJY5 639 aa22.46■■□□□ 1.19
PTPN11-207ENST00000639857 GRM8O00222 908 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms