RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 C9orf78Q9NZ63 289 aaPredicted RBP16.97■□□□□ 0.31
ATRIP-208ENST00000639561 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
ATRIP-208ENST00000639561 A1BGP04217 495 aa16.97■□□□□ 0.31
ATRIP-208ENST00000639561 PIM2Q9P1W9 311 aa16.97■□□□□ 0.31
ATRIP-208ENST00000639561 RAB11FIP3O75154 756 aa16.96■□□□□ 0.31
ATRIP-208ENST00000639561 DDX58O95786 925 aaKnown RBP16.96■□□□□ 0.31
ATRIP-208ENST00000639561 RHPN1Q8TCX5 695 aa16.96■□□□□ 0.31
ATRIP-208ENST00000639561 SERPINB2P05120 415 aa16.96■□□□□ 0.31
ATRIP-208ENST00000639561 IGKV5-2P06315 115 aa16.96■□□□□ 0.31
ATRIP-208ENST00000639561 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
ATRIP-208ENST00000639561 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
ATRIP-208ENST00000639561 XAGE3Q8WTP9 111 aa16.96■□□□□ 0.31
ATRIP-208ENST00000639561 GRM8O00222 908 aa16.95■□□□□ 0.3
ATRIP-208ENST00000639561 NUTM1Q86Y26 1132 aa16.95■□□□□ 0.3
ATRIP-208ENST00000639561 KAZALD1Q96I82 304 aa16.95■□□□□ 0.3
ATRIP-208ENST00000639561 UTRNP46939 3433 aa16.95■□□□□ 0.3
ATRIP-208ENST00000639561 UTYO14607 1347 aa16.95■□□□□ 0.3
ATRIP-208ENST00000639561 EIF5BO60841 1220 aaKnown RBP16.95■□□□□ 0.3
ATRIP-208ENST00000639561 KCNA3P22001 575 aa16.95■□□□□ 0.3
ATRIP-208ENST00000639561 COPS6Q7L5N1 327 aa16.95■□□□□ 0.3
ATRIP-208ENST00000639561 TBC1D2BQ9UPU7 963 aa16.95■□□□□ 0.3
ATRIP-208ENST00000639561 CARMIL3Q8ND23 1372 aa16.95■□□□□ 0.3
ATRIP-208ENST00000639561 DALRD3Q5D0E6 543 aaKnown RBP16.94■□□□□ 0.3
ATRIP-208ENST00000639561 RIC3Q7Z5B4 369 aa16.94■□□□□ 0.3
ATRIP-208ENST00000639561 DZIP3Q86Y13 1208 aaKnown RBP16.94■□□□□ 0.3
ATRIP-208ENST00000639561 KIF1BPQ96EK5 621 aa16.94■□□□□ 0.3
ATRIP-208ENST00000639561 SUCLG2Q96I99 432 aa16.94■□□□□ 0.3
ATRIP-208ENST00000639561 BICDL1Q6ZP65 573 aa16.93■□□□□ 0.3
ATRIP-208ENST00000639561 AOX1Q06278 1338 aa16.93■□□□□ 0.3
ATRIP-208ENST00000639561 ERC2O15083 957 aa16.93■□□□□ 0.3
ATRIP-208ENST00000639561 CAMTA2O94983 1202 aa16.93■□□□□ 0.3
ATRIP-208ENST00000639561 TBC1D9BQ66K14 1250 aa16.93■□□□□ 0.3
ATRIP-208ENST00000639561 ZNF652Q9Y2D9 606 aa16.93■□□□□ 0.3
ATRIP-208ENST00000639561 NEURL1BA8MQ27 555 aa16.92■□□□□ 0.3
ATRIP-208ENST00000639561 RGL2O15211 777 aa16.92■□□□□ 0.3
ATRIP-208ENST00000639561 CHRNA5P30532 468 aa16.92■□□□□ 0.3
ATRIP-208ENST00000639561 DDIT3P35638 169 aa16.92■□□□□ 0.3
ATRIP-208ENST00000639561 ARHGAP27Q6ZUM4 889 aa16.92■□□□□ 0.3
ATRIP-208ENST00000639561 PI4K2BQ8TCG2 481 aa16.92■□□□□ 0.3
ATRIP-208ENST00000639561 BICC1Q9H694 974 aaKnown RBP16.92■□□□□ 0.3
ATRIP-208ENST00000639561 PA2G4Q9UQ80 394 aaKnown RBP16.92■□□□□ 0.3
ATRIP-208ENST00000639561 ANKRD31Q8N7Z5 1873 aa16.91■□□□□ 0.3
ATRIP-208ENST00000639561 TRIM6-TRIM34B2RNG4 842 aa16.91■□□□□ 0.3
ATRIP-208ENST00000639561 REC8O95072 547 aa16.91■□□□□ 0.3
ATRIP-208ENST00000639561 RILPL2Q969X0 211 aa16.91■□□□□ 0.3
ATRIP-208ENST00000639561 SETDB2Q96T68 719 aa16.91■□□□□ 0.3
ATRIP-208ENST00000639561 METTL22Q9BUU2 404 aaPredicted RBP16.91■□□□□ 0.3
ATRIP-208ENST00000639561 HSP90AB4PQ58FF6 505 aa16.91■□□□□ 0.3
ATRIP-208ENST00000639561 CLEC4GQ6UXB4 293 aa16.91■□□□□ 0.3
ATRIP-208ENST00000639561 MYD88Q99836 296 aa16.91■□□□□ 0.3
ATRIP-208ENST00000639561 GOLGB1Q14789 3259 aaKnown RBP16.9■□□□□ 0.3
ATRIP-208ENST00000639561 CHMLP26374 656 aa16.9■□□□□ 0.3
ATRIP-208ENST00000639561 GCKRQ14397 625 aa16.9■□□□□ 0.3
ATRIP-208ENST00000639561 ANKRD13DQ6ZTN6 518 aa16.9■□□□□ 0.3
ATRIP-208ENST00000639561 ESYT1Q9BSJ8 1104 aa16.9■□□□□ 0.3
ATRIP-208ENST00000639561 ARFGEF2Q9Y6D5 1785 aa16.9■□□□□ 0.3
ATRIP-208ENST00000639561 K7ELQ4 463 aaPredicted RBP16.89■□□□□ 0.3
ATRIP-208ENST00000639561 NEXNQ0ZGT2 675 aa16.89■□□□□ 0.3
ATRIP-208ENST00000639561 GPBP1L1Q9HC44 474 aaPredicted RBP16.89■□□□□ 0.3
ATRIP-208ENST00000639561 CHMP5Q9NZZ3 219 aa16.89■□□□□ 0.3
ATRIP-208ENST00000639561 H0YIN7 160 aa16.89■□□□□ 0.29
ATRIP-208ENST00000639561 RABEP1Q15276 862 aa16.89■□□□□ 0.29
ATRIP-208ENST00000639561 HDAC5Q9UQL6 1122 aa16.89■□□□□ 0.29
ATRIP-208ENST00000639561 NBPF26B4DH59 902 aa16.88■□□□□ 0.29
ATRIP-208ENST00000639561 NPHP1O15259 732 aa16.88■□□□□ 0.29
ATRIP-208ENST00000639561 PDE6BP35913 854 aa16.88■□□□□ 0.29
ATRIP-208ENST00000639561 C1QTNF8P60827 252 aa16.88■□□□□ 0.29
ATRIP-208ENST00000639561 OS9Q13438 667 aaPredicted RBP16.88■□□□□ 0.29
ATRIP-208ENST00000639561 NBPF10Q6P3W6 841 aaKnown RBP16.88■□□□□ 0.29
ATRIP-208ENST00000639561 C2CD5Q86YS7 1000 aa16.88■□□□□ 0.29
ATRIP-208ENST00000639561 NBPF15Q8N660 670 aa16.88■□□□□ 0.29
ATRIP-208ENST00000639561 AK9Q5TCS8 1911 aa16.88■□□□□ 0.29
ATRIP-208ENST00000639561 ST5P78524 1137 aa16.88■□□□□ 0.29
ATRIP-208ENST00000639561 PRR5LQ6MZQ0 368 aa16.88■□□□□ 0.29
ATRIP-208ENST00000639561 CNBD1Q8NA66 436 aa16.88■□□□□ 0.29
ATRIP-208ENST00000639561 BRIP1Q9BX63 1249 aa16.88■□□□□ 0.29
ATRIP-208ENST00000639561 COL11A2P13942 1736 aaPredicted RBP16.87■□□□□ 0.29
ATRIP-208ENST00000639561 MAP4K4O95819 1239 aaPredicted RBP16.87■□□□□ 0.29
ATRIP-208ENST00000639561 EPHA10Q5JZY3 1008 aa16.87■□□□□ 0.29
ATRIP-208ENST00000639561 TTLL6Q8N841 843 aa16.87■□□□□ 0.29
ATRIP-208ENST00000639561 IL25Q9H293 177 aa16.87■□□□□ 0.29
ATRIP-208ENST00000639561 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.87■□□□□ 0.29
ATRIP-208ENST00000639561 ERBB4Q15303 1308 aa16.87■□□□□ 0.29
ATRIP-208ENST00000639561 SBF1O95248 1867 aa16.86■□□□□ 0.29
ATRIP-208ENST00000639561 CLASRPQ8N2M8 674 aaKnown RBP16.85■□□□□ 0.29
ATRIP-208ENST00000639561 SASH1O94885 1247 aa16.85■□□□□ 0.29
ATRIP-208ENST00000639561 JARID2Q92833 1246 aaPredicted RBP16.85■□□□□ 0.29
ATRIP-208ENST00000639561 NUP98P52948 1817 aa16.84■□□□□ 0.29
ATRIP-208ENST00000639561 ATP5J2-PTCD1G3V325 749 aa16.84■□□□□ 0.29
ATRIP-208ENST00000639561 NBPF5PQ86XG9 351 aaPredicted RBP16.84■□□□□ 0.29
ATRIP-208ENST00000639561 ERC1Q8IUD2 1116 aa16.84■□□□□ 0.29
ATRIP-208ENST00000639561 PLBD2Q8NHP8 589 aa16.84■□□□□ 0.29
ATRIP-208ENST00000639561 ZNF526Q8TF50 670 aaPredicted RBP16.84■□□□□ 0.29
ATRIP-208ENST00000639561 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
ATRIP-208ENST00000639561 TTC41PQ6P2S7 1318 aa16.84■□□□□ 0.29
ATRIP-208ENST00000639561 C9orf131Q5VYM1 1079 aa16.84■□□□□ 0.29
ATRIP-208ENST00000639561 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
ATRIP-208ENST00000639561 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
ATRIP-208ENST00000639561 ERVV-1B6SEH8 477 aa16.83■□□□□ 0.28
ATRIP-208ENST00000639561 ANO2Q9NQ90 1003 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms