RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 ZNF277Q9NRM2 450 aaPredicted RBP15.93■□□□□ 0.14
CLN6-225ENST00000638144 CDHR2Q9BYE9 1310 aa15.93■□□□□ 0.14
CLN6-225ENST00000638144 GRAPQ13588 217 aa15.92■□□□□ 0.14
CLN6-225ENST00000638144 SF3B3Q15393 1217 aaKnown RBP15.92■□□□□ 0.14
CLN6-225ENST00000638144 GRAPLQ8TC17 118 aaPredicted RBP15.92■□□□□ 0.14
CLN6-225ENST00000638144 ZBED9Q6R2W3 1325 aa15.92■□□□□ 0.14
CLN6-225ENST00000638144 LRRC37AA6NMS7 1700 aa15.91■□□□□ 0.14
CLN6-225ENST00000638144 H7C1W4 665 aa15.91■□□□□ 0.14
CLN6-225ENST00000638144 PDE8AO60658 829 aa15.91■□□□□ 0.14
CLN6-225ENST00000638144 FKBP4Q02790 459 aaKnown RBP eCLIP15.91■□□□□ 0.14
CLN6-225ENST00000638144 COL4A5P29400 1685 aa15.91■□□□□ 0.14
CLN6-225ENST00000638144 LTBP3Q9NS15 1303 aa15.91■□□□□ 0.14
CLN6-225ENST00000638144 CASP7P55210 303 aa15.9■□□□□ 0.14
CLN6-225ENST00000638144 CTSWP56202 376 aa15.9■□□□□ 0.14
CLN6-225ENST00000638144 ALDH1L2Q3SY69 923 aa15.9■□□□□ 0.14
CLN6-225ENST00000638144 ATP6V0A2Q9Y487 856 aa15.9■□□□□ 0.14
CLN6-225ENST00000638144 DUOX1Q9NRD9 1551 aa15.89■□□□□ 0.13
CLN6-225ENST00000638144 RARSP54136 660 aaKnown RBP15.89■□□□□ 0.13
CLN6-225ENST00000638144 RTKN2Q8IZC4 609 aa15.89■□□□□ 0.13
CLN6-225ENST00000638144 GPBP1L1Q9HC44 474 aaPredicted RBP15.89■□□□□ 0.13
CLN6-225ENST00000638144 PTPRCP08575 1304 aa15.89■□□□□ 0.13
CLN6-225ENST00000638144 CT47B1P0C2W7 299 aaPredicted RBP15.88■□□□□ 0.13
CLN6-225ENST00000638144 CCDC152Q4G0S7 254 aa15.88■□□□□ 0.13
CLN6-225ENST00000638144 SRCIN1Q9C0H9 1055 aa15.88■□□□□ 0.13
CLN6-225ENST00000638144 GREM2Q9H772 168 aa15.88■□□□□ 0.13
CLN6-225ENST00000638144 NMRK2Q9NPI5 230 aa15.88■□□□□ 0.13
CLN6-225ENST00000638144 NOB1Q9ULX3 412 aaKnown RBP15.88■□□□□ 0.13
CLN6-225ENST00000638144 BCAR3O75815 825 aa15.87■□□□□ 0.13
CLN6-225ENST00000638144 BBOX1O75936 387 aa15.87■□□□□ 0.13
CLN6-225ENST00000638144 FAM161AQ3B820 660 aa15.87■□□□□ 0.13
CLN6-225ENST00000638144 TTLL11Q8NHH1 800 aa15.87■□□□□ 0.13
CLN6-225ENST00000638144 GRM8O00222 908 aa15.86■□□□□ 0.13
CLN6-225ENST00000638144 HSP90B1P14625 803 aaKnown RBP15.86■□□□□ 0.13
CLN6-225ENST00000638144 IARSP41252 1262 aaKnown RBP15.86■□□□□ 0.13
CLN6-225ENST00000638144 RPS8P62241 208 aaKnown RBP15.86■□□□□ 0.13
CLN6-225ENST00000638144 EPHA10Q5JZY3 1008 aa15.86■□□□□ 0.13
CLN6-225ENST00000638144 CC2D2BQ6DHV5 1058 aa15.86■□□□□ 0.13
CLN6-225ENST00000638144 SP8Q8IXZ3 490 aa15.86■□□□□ 0.13
CLN6-225ENST00000638144 PSMD1Q99460 953 aa15.86■□□□□ 0.13
CLN6-225ENST00000638144 C9orf78Q9NZ63 289 aaPredicted RBP15.86■□□□□ 0.13
CLN6-225ENST00000638144 TNNQ9UQP3 1299 aa15.86■□□□□ 0.13
CLN6-225ENST00000638144 LTBP1Q14766 1721 aa15.85■□□□□ 0.13
CLN6-225ENST00000638144 ALDH1L1O75891 902 aa15.85■□□□□ 0.13
CLN6-225ENST00000638144 DPP8Q6V1X1 898 aaPredicted RBP15.85■□□□□ 0.13
CLN6-225ENST00000638144 MPNDQ8N594 471 aa15.85■□□□□ 0.13
CLN6-225ENST00000638144 GPR101Q96P66 508 aaPredicted RBP15.85■□□□□ 0.13
CLN6-225ENST00000638144 TMX4Q9H1E5 349 aaPredicted RBP15.85■□□□□ 0.13
CLN6-225ENST00000638144 CHMP3Q9Y3E7 222 aa15.85■□□□□ 0.13
CLN6-225ENST00000638144 ZNF541Q9H0D2 1346 aa15.85■□□□□ 0.13
CLN6-225ENST00000638144 NBPF7P0C2Y1 421 aaPredicted RBP15.84■□□□□ 0.13
CLN6-225ENST00000638144 GPSM2P81274 684 aa15.84■□□□□ 0.13
CLN6-225ENST00000638144 AOC3Q16853 763 aa15.84■□□□□ 0.13
CLN6-225ENST00000638144 PLA2G12BQ9BX93 195 aa15.84■□□□□ 0.13
CLN6-225ENST00000638144 PPIP5K2O43314 1243 aa15.83■□□□□ 0.12
CLN6-225ENST00000638144 FOXO4P98177 505 aa15.83■□□□□ 0.12
CLN6-225ENST00000638144 ANKRD18AQ8IVF6 992 aa15.83■□□□□ 0.12
CLN6-225ENST00000638144 LARGE2Q8N3Y3 721 aa15.83■□□□□ 0.12
CLN6-225ENST00000638144 FRAT1Q92837 279 aaPredicted RBP15.83■□□□□ 0.12
CLN6-225ENST00000638144 SUCLG2Q96I99 432 aa15.83■□□□□ 0.12
CLN6-225ENST00000638144 NSFL1CQ9UNZ2 370 aaKnown RBP15.83■□□□□ 0.12
CLN6-225ENST00000638144 ZC3H4Q9UPT8 1303 aaKnown RBP15.83■□□□□ 0.12
CLN6-225ENST00000638144 KIF3CO14782 793 aa15.82■□□□□ 0.12
CLN6-225ENST00000638144 DDNO94850 711 aaPredicted RBP15.82■□□□□ 0.12
CLN6-225ENST00000638144 ITGA6P23229 1130 aa15.82■□□□□ 0.12
CLN6-225ENST00000638144 TMC4Q7Z404 712 aa15.82■□□□□ 0.12
CLN6-225ENST00000638144 CDC5LQ99459 802 aaKnown RBP15.82■□□□□ 0.12
CLN6-225ENST00000638144 KDM2BQ8NHM5 1336 aa15.82■□□□□ 0.12
CLN6-225ENST00000638144 KIF16BQ96L93 1317 aa15.82■□□□□ 0.12
CLN6-225ENST00000638144 RTL9Q8NET4 1388 aa15.82■□□□□ 0.12
CLN6-225ENST00000638144 GLTPD2A6NH11 291 aa15.81■□□□□ 0.12
CLN6-225ENST00000638144 BRPF1P55201 1214 aaPredicted RBP15.81■□□□□ 0.12
CLN6-225ENST00000638144 LMBR1LQ6UX01 489 aa15.81■□□□□ 0.12
CLN6-225ENST00000638144 KAZALD1Q96I82 304 aa15.81■□□□□ 0.12
CLN6-225ENST00000638144 API5Q9BZZ5 524 aaKnown RBP15.81■□□□□ 0.12
CLN6-225ENST00000638144 RRAGCQ9HB90 399 aa15.81■□□□□ 0.12
CLN6-225ENST00000638144 POLLQ9UGP5 575 aa15.81■□□□□ 0.12
CLN6-225ENST00000638144 A0A1B0GUL6 1792 aa15.8■□□□□ 0.12
CLN6-225ENST00000638144 WTIPA6NIX2 430 aaPredicted RBP15.8■□□□□ 0.12
CLN6-225ENST00000638144 C6orf229H3BNL8 230 aa15.8■□□□□ 0.12
CLN6-225ENST00000638144 RIMBP2O15034 1052 aa15.8■□□□□ 0.12
CLN6-225ENST00000638144 CSF1RP07333 972 aa15.8■□□□□ 0.12
CLN6-225ENST00000638144 JDP2Q8WYK2 163 aa15.8■□□□□ 0.12
CLN6-225ENST00000638144 CLUAP1Q96AJ1 413 aa15.8■□□□□ 0.12
CLN6-225ENST00000638144 YTHDC1Q96MU7 727 aaKnown RBP15.8■□□□□ 0.12
CLN6-225ENST00000638144 RTFDC1Q9BY42 306 aaPredicted RBP15.8■□□□□ 0.12
CLN6-225ENST00000638144 ANKIB1Q9P2G1 1089 aa15.8■□□□□ 0.12
CLN6-225ENST00000638144 WDR90Q96KV7 1748 aa15.8■□□□□ 0.12
CLN6-225ENST00000638144 UFL1O94874 794 aa15.79■□□□□ 0.12
CLN6-225ENST00000638144 TRIM27P14373 513 aa15.79■□□□□ 0.12
CLN6-225ENST00000638144 GRIPAP1Q4V328 841 aa15.79■□□□□ 0.12
CLN6-225ENST00000638144 NIM1KQ8IY84 436 aa15.79■□□□□ 0.12
CLN6-225ENST00000638144 SUPT20HQ8NEM7 779 aa15.79■□□□□ 0.12
CLN6-225ENST00000638144 ZNF594Q96JF6 807 aaPredicted RBP15.79■□□□□ 0.12
CLN6-225ENST00000638144 USP44Q9H0E7 712 aa15.79■□□□□ 0.12
CLN6-225ENST00000638144 BICC1Q9H694 974 aaKnown RBP15.79■□□□□ 0.12
CLN6-225ENST00000638144 UTYO14607 1347 aa15.78■□□□□ 0.12
CLN6-225ENST00000638144 ANKRD18BA2A2Z9 1011 aa15.78■□□□□ 0.12
CLN6-225ENST00000638144 FZD9O00144 591 aa15.78■□□□□ 0.12
CLN6-225ENST00000638144 IGHMBP2P38935 993 aaKnown RBP15.78■□□□□ 0.12
CLN6-225ENST00000638144 KIAA2012Q0VF49 1180 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms