RNA–Protein interactions for RNA: ENST00000638134.1

CLCN2-222, Transcript of chloride voltage-gated channel 2, human

TSL 5

Gene CLCN2, Length 2,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN2-222	ENST00000638134	TRIM5	Q9C035	493 aa		18.46	■□□□□ 0.55
CLCN2-222	ENST00000638134	NRBP1	Q9UHY1	535 aa		18.46	■□□□□ 0.55
CLCN2-222	ENST00000638134	ELP1	O95163	1332 aa		18.46	■□□□□ 0.55
CLCN2-222	ENST00000638134	NOL8	Q76FK4	1167 aa	Known RBP	18.46	■□□□□ 0.55
CLCN2-222	ENST00000638134	SYT1	P21579	422 aa		18.45	■□□□□ 0.54
CLCN2-222	ENST00000638134	PDE1A	P54750	535 aa		18.45	■□□□□ 0.54
CLCN2-222	ENST00000638134	LUZP1	Q86V48	1076 aa		18.45	■□□□□ 0.54
CLCN2-222	ENST00000638134	CWC15	Q9P013	229 aa	Known RBP	18.45	■□□□□ 0.54
CLCN2-222	ENST00000638134	CLIP2	Q9UDT6	1046 aa		18.45	■□□□□ 0.54
CLCN2-222	ENST00000638134	CAVIN2	O95810	425 aa		18.44	■□□□□ 0.54
CLCN2-222	ENST00000638134	GPS2	Q13227	327 aa		18.44	■□□□□ 0.54
CLCN2-222	ENST00000638134	CBX8	Q9HC52	389 aa		18.44	■□□□□ 0.54
CLCN2-222	ENST00000638134	BRMS1	Q9HCU9	246 aa		18.44	■□□□□ 0.54
CLCN2-222	ENST00000638134	SPATA31A1	Q5TZJ5	1347 aa		18.44	■□□□□ 0.54
CLCN2-222	ENST00000638134	DHX16	O60231	1041 aa	Known RBP	18.44	■□□□□ 0.54
CLCN2-222	ENST00000638134	PNMA6A	P0CW24	399 aa	Predicted RBP	18.44	■□□□□ 0.54
CLCN2-222	ENST00000638134	LRRC8A	Q8IWT6	810 aa		18.44	■□□□□ 0.54
CLCN2-222	ENST00000638134	RAPGEF4	Q8WZA2	1011 aa		18.44	■□□□□ 0.54
CLCN2-222	ENST00000638134	NUP62CL	Q9H1M0	184 aa		18.44	■□□□□ 0.54
CLCN2-222	ENST00000638134		V9GYY5	206 aa	Predicted RBP	18.44	■□□□□ 0.54
CLCN2-222	ENST00000638134	ATP8B1	O43520	1251 aa		18.43	■□□□□ 0.54
CLCN2-222	ENST00000638134	CASQ1	P31415	396 aa		18.43	■□□□□ 0.54
CLCN2-222	ENST00000638134	L2HGDH	Q9H9P8	463 aa		18.43	■□□□□ 0.54
CLCN2-222	ENST00000638134	SPATA31A5	Q5VU36	1347 aa		18.43	■□□□□ 0.54
CLCN2-222	ENST00000638134	SPATA31A7	Q8IWB4	1347 aa		18.43	■□□□□ 0.54
CLCN2-222	ENST00000638134	PLA2G4A	P47712	749 aa		18.43	■□□□□ 0.54
CLCN2-222	ENST00000638134	TSPYL6	Q8N831	410 aa		18.43	■□□□□ 0.54
CLCN2-222	ENST00000638134	GTF3C6	Q969F1	213 aa		18.43	■□□□□ 0.54
CLCN2-222	ENST00000638134	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	18.43	■□□□□ 0.54
CLCN2-222	ENST00000638134	DLG5	Q8TDM6	1919 aa		18.42	■□□□□ 0.54
CLCN2-222	ENST00000638134	GTF2A1	P52655	376 aa	Predicted RBP	18.42	■□□□□ 0.54
CLCN2-222	ENST00000638134	ICE2	Q659A1	982 aa		18.42	■□□□□ 0.54
CLCN2-222	ENST00000638134	HMMR	O75330	724 aa		18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	ZNF853	P0CG23	659 aa		18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	DCTN1	Q14203	1278 aa		18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	TWISTNB	Q3B726	338 aa	Predicted RBP	18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	SYT10	Q6XYQ8	523 aa		18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	ANO2	Q9NQ90	1003 aa		18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	ARGLU1	Q9NWB6	273 aa	Predicted RBP	18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	MYO1C	O00159	1063 aa		18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	ZRANB2	O95218	330 aa	Known RBP eCLIP	18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	TUBB4A	P04350	444 aa		18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	IL2RB	P14784	551 aa		18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	TAT	P17735	454 aa	Predicted RBP	18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	CLCN6	P51797	869 aa		18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	VPS72	Q15906	364 aa		18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	FAM98C	Q17RN3	349 aa	Known RBP	18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	SARM1	Q6SZW1	724 aa		18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	RBM43	Q6ZSC3	357 aa	Known RBP	18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	THUMPD2	Q9BTF0	503 aa	Known RBP	18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	UPF3B	Q9BZI7	483 aa	Known RBP	18.41	■□□□□ 0.54
CLCN2-222	ENST00000638134	CHML	P26374	656 aa		18.4	■□□□□ 0.54
CLCN2-222	ENST00000638134	NFE2L2	Q16236	605 aa		18.4	■□□□□ 0.54
CLCN2-222	ENST00000638134	ANO6	Q4KMQ2	910 aa		18.4	■□□□□ 0.54
CLCN2-222	ENST00000638134	KRBA2	Q6ZNG9	492 aa		18.4	■□□□□ 0.54
CLCN2-222	ENST00000638134	FILIP1	Q7Z7B0	1213 aa		18.4	■□□□□ 0.54
CLCN2-222	ENST00000638134	SMC3	Q9UQE7	1217 aa		18.4	■□□□□ 0.54
CLCN2-222	ENST00000638134	HSPA4	P34932	840 aa		18.4	■□□□□ 0.54
CLCN2-222	ENST00000638134	GOLGA6L1	Q8N7Z2	621 aa		18.4	■□□□□ 0.54
CLCN2-222	ENST00000638134	NFATC2IP	Q8NCF5	419 aa		18.4	■□□□□ 0.54
CLCN2-222	ENST00000638134	MRFAP1L1	Q96HT8	127 aa		18.4	■□□□□ 0.54
CLCN2-222	ENST00000638134	DNM1	Q05193	864 aa	Known RBP	18.39	■□□□□ 0.53
CLCN2-222	ENST00000638134	CCDC144B	Q3MJ40	725 aa		18.39	■□□□□ 0.53
CLCN2-222	ENST00000638134	CCDC144CP	Q8IYA2	1237 aa		18.39	■□□□□ 0.53
CLCN2-222	ENST00000638134	CCAR2	Q8N163	923 aa	Known RBP	18.39	■□□□□ 0.53
CLCN2-222	ENST00000638134	UBXN6	Q9BZV1	441 aa		18.39	■□□□□ 0.53
CLCN2-222	ENST00000638134	QTRT2	Q9H974	415 aa	Known RBP	18.39	■□□□□ 0.53
CLCN2-222	ENST00000638134	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.39	■□□□□ 0.53
CLCN2-222	ENST00000638134	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	NEK11	Q8NG66	645 aa		18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	LIMCH1	Q9UPQ0	1083 aa		18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	LRRFIP2	Q9Y608	721 aa	Known RBP	18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	USP27X	A6NNY8	438 aa		18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	ZSCAN26	Q16670	478 aa		18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	MCM10	Q7L590	875 aa		18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	TNMD	Q9H2S6	317 aa		18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	ATG3	Q9NT62	314 aa		18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	DDX19A	Q9NUU7	478 aa	Known RBP	18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	SALL3	Q9BXA9	1300 aa		18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	OVOS2	A0A0G2JMS6	1433 aa		18.38	■□□□□ 0.53
CLCN2-222	ENST00000638134	CLGN	O14967	610 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	SKIL	P12757	684 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	PSEN1	P49768	467 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	TPRN	Q4KMQ1	711 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	TMCO3	Q6UWJ1	677 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	TTC14	Q96N46	770 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	MBIP	Q9NS73	344 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	RGS17	Q9UGC6	210 aa	Predicted RBP	18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	MTMR6	Q9Y217	621 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	DISP2	A7MBM2	1401 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	GLI3	P10071	1580 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	GOLGA5	Q8TBA6	731 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	GJD4	Q96KN9	370 aa	Predicted RBP	18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	MYCBP	Q99417	103 aa	Predicted RBP	18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	NCAPG	Q9BPX3	1015 aa		18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	RNF216	Q9NWF9	866 aa	Predicted RBP	18.37	■□□□□ 0.53
CLCN2-222	ENST00000638134	CYP27B1	O15528	508 aa		18.36	■□□□□ 0.53
CLCN2-222	ENST00000638134	ATRN	O75882	1429 aa		18.36	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms