RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CC2D2BQ6DHV5 1058 aa10.17□□□□□ -0.78
PNKP-229ENST00000637897 SP8Q8IXZ3 490 aa10.17□□□□□ -0.78
PNKP-229ENST00000637897 GRAPLQ8TC17 118 aaPredicted RBP10.17□□□□□ -0.78
PNKP-229ENST00000637897 MRS2Q9HD23 443 aa10.17□□□□□ -0.78
PNKP-229ENST00000637897 SHTN1A0MZ66 631 aa10.16□□□□□ -0.78
PNKP-229ENST00000637897 WTIPA6NIX2 430 aaPredicted RBP10.16□□□□□ -0.78
PNKP-229ENST00000637897 EPS15P42566 896 aa10.16□□□□□ -0.78
PNKP-229ENST00000637897 NCBP3Q53F19 620 aaKnown RBP10.16□□□□□ -0.78
PNKP-229ENST00000637897 CHADLQ6NUI6 762 aa10.16□□□□□ -0.78
PNKP-229ENST00000637897 GPR101Q96P66 508 aaPredicted RBP10.16□□□□□ -0.78
PNKP-229ENST00000637897 MYD88Q99836 296 aa10.16□□□□□ -0.78
PNKP-229ENST00000637897 METTL22Q9BUU2 404 aaPredicted RBP10.16□□□□□ -0.78
PNKP-229ENST00000637897 SEC31BQ9NQW1 1179 aa10.16□□□□□ -0.78
PNKP-229ENST00000637897 FANCIQ9NVI1 1328 aa10.15□□□□□ -0.78
PNKP-229ENST00000637897 IRS4O14654 1257 aaPredicted RBP10.15□□□□□ -0.78
PNKP-229ENST00000637897 VAMP4O75379 141 aa10.15□□□□□ -0.78
PNKP-229ENST00000637897 BBOX1O75936 387 aa10.15□□□□□ -0.78
PNKP-229ENST00000637897 EPHX2P34913 555 aa10.15□□□□□ -0.78
PNKP-229ENST00000637897 CXCL9Q07325 125 aa10.15□□□□□ -0.78
PNKP-229ENST00000637897 GPC2Q8N158 579 aa10.15□□□□□ -0.78
PNKP-229ENST00000637897 LARGE2Q8N3Y3 721 aa10.15□□□□□ -0.78
PNKP-229ENST00000637897 ZBTB38Q8NAP3 1195 aaPredicted RBP10.15□□□□□ -0.78
PNKP-229ENST00000637897 KCNQ5Q9NR82 932 aa10.15□□□□□ -0.78
PNKP-229ENST00000637897 POLLQ9UGP5 575 aa10.15□□□□□ -0.78
PNKP-229ENST00000637897 IL16Q14005 1332 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 ZNF521Q96K83 1311 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 SCN9AQ15858 1988 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 PI4KAP2A4QPH2 592 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 PPIP5K2O43314 1243 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 CASP7P55210 303 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 GPSM2P81274 684 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 KIAA2012Q0VF49 1180 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 COL13A1Q5TAT6 717 aaPredicted RBP10.14□□□□□ -0.79
PNKP-229ENST00000637897 MAP1SQ66K74 1059 aaPredicted RBP10.14□□□□□ -0.79
PNKP-229ENST00000637897 RIC3Q7Z5B4 369 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 LDHDQ86WU2 507 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 PI4KAP1Q8N8J0 262 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 YTHDC1Q96MU7 727 aaKnown RBP10.14□□□□□ -0.79
PNKP-229ENST00000637897 HACL1Q9UJ83 578 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 MAP3K2Q9Y2U5 619 aa10.14□□□□□ -0.79
PNKP-229ENST00000637897 SALL2Q9Y467 1007 aaPredicted RBP10.14□□□□□ -0.79
PNKP-229ENST00000637897 PCCAP05165 728 aaPredicted RBP10.13□□□□□ -0.79
PNKP-229ENST00000637897 HIRAP54198 1017 aaPredicted RBP10.13□□□□□ -0.79
PNKP-229ENST00000637897 CALD1Q05682 793 aaKnown RBP10.13□□□□□ -0.79
PNKP-229ENST00000637897 CWF19L2Q2TBE0 894 aaKnown RBP10.13□□□□□ -0.79
PNKP-229ENST00000637897 TWISTNBQ3B726 338 aaPredicted RBP10.13□□□□□ -0.79
PNKP-229ENST00000637897 CCDC30Q5VVM6 783 aa10.13□□□□□ -0.79
PNKP-229ENST00000637897 KSR2Q6VAB6 950 aa10.13□□□□□ -0.79
PNKP-229ENST00000637897 DDX46Q7L014 1031 aaKnown RBP10.13□□□□□ -0.79
PNKP-229ENST00000637897 MPNDQ8N594 471 aa10.13□□□□□ -0.79
PNKP-229ENST00000637897 CCDC191Q8NCU4 936 aa10.13□□□□□ -0.79
PNKP-229ENST00000637897 GJA3Q9Y6H8 435 aa10.13□□□□□ -0.79
PNKP-229ENST00000637897 RTL9Q8NET4 1388 aa10.13□□□□□ -0.79
PNKP-229ENST00000637897 IQCA1LA6NCM1 817 aa10.12□□□□□ -0.79
PNKP-229ENST00000637897 EGFRP00533 1210 aa10.12□□□□□ -0.79
PNKP-229ENST00000637897 EXOSC9Q06265 439 aaKnown RBP10.12□□□□□ -0.79
PNKP-229ENST00000637897 GOLGA2Q08379 1002 aa10.12□□□□□ -0.79
PNKP-229ENST00000637897 GRIPAP1Q4V328 841 aa10.12□□□□□ -0.79
PNKP-229ENST00000637897 EAPPQ56P03 285 aaPredicted RBP10.12□□□□□ -0.79
PNKP-229ENST00000637897 DPP8Q6V1X1 898 aaPredicted RBP10.12□□□□□ -0.79
PNKP-229ENST00000637897 JDP2Q8WYK2 163 aa10.12□□□□□ -0.79
PNKP-229ENST00000637897 CCDC85AQ96PX6 553 aaPredicted RBP10.12□□□□□ -0.79
PNKP-229ENST00000637897 ZNRF3Q9ULT6 936 aa10.12□□□□□ -0.79
PNKP-229ENST00000637897 NEURL1BA8MQ27 555 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 H7C1W4 665 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 RAD17O75943 681 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 SLC4A2P04920 1241 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 EIF6P56537 245 aaKnown RBP10.11□□□□□ -0.79
PNKP-229ENST00000637897 RPS8P62241 208 aaKnown RBP10.11□□□□□ -0.79
PNKP-229ENST00000637897 DLK2Q6UY11 383 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 WDR63Q8IWG1 891 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 NIM1KQ8IY84 436 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 CNTROBQ8N137 903 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 TRPM4Q8TD43 1214 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 VPS33BQ9H267 617 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 CWC25Q9NXE8 425 aaPredicted RBP10.11□□□□□ -0.79
PNKP-229ENST00000637897 GPRC5DQ9NZD1 345 aa10.11□□□□□ -0.79
PNKP-229ENST00000637897 CDHR2Q9BYE9 1310 aa10.1□□□□□ -0.79
PNKP-229ENST00000637897 ZNF646O15015 1829 aaPredicted RBP10.1□□□□□ -0.79
PNKP-229ENST00000637897 TRAF5O00463 557 aa10.1□□□□□ -0.79
PNKP-229ENST00000637897 GMPSP49915 693 aaPredicted RBP10.1□□□□□ -0.79
PNKP-229ENST00000637897 FLIIQ13045 1269 aa10.1□□□□□ -0.79
PNKP-229ENST00000637897 CST9Q5W186 159 aa10.1□□□□□ -0.79
PNKP-229ENST00000637897 TTLL11Q8NHH1 800 aa10.1□□□□□ -0.79
PNKP-229ENST00000637897 TBC1D16Q8TBP0 767 aa10.1□□□□□ -0.79
PNKP-229ENST00000637897 DBNDD1Q9H9R9 158 aa10.1□□□□□ -0.79
PNKP-229ENST00000637897 PODXL2Q9NZ53 605 aa10.1□□□□□ -0.79
PNKP-229ENST00000637897 MKRN1Q9UHC7 482 aaKnown RBP10.1□□□□□ -0.79
PNKP-229ENST00000637897 NSFL1CQ9UNZ2 370 aaKnown RBP10.1□□□□□ -0.79
PNKP-229ENST00000637897 ZBTB12Q9Y330 459 aaPredicted RBP10.1□□□□□ -0.79
PNKP-229ENST00000637897 F6X3S4 739 aa10.09□□□□□ -0.79
PNKP-229ENST00000637897 PSMD14O00487 310 aa10.09□□□□□ -0.79
PNKP-229ENST00000637897 RIMBP2O15034 1052 aa10.09□□□□□ -0.79
PNKP-229ENST00000637897 PDE8AO60658 829 aa10.09□□□□□ -0.79
PNKP-229ENST00000637897 FAM9BQ8IZU0 186 aa10.09□□□□□ -0.79
PNKP-229ENST00000637897 GREM2Q9H772 168 aa10.09□□□□□ -0.79
PNKP-229ENST00000637897 PCDH10Q9P2E7 1040 aa10.09□□□□□ -0.79
PNKP-229ENST00000637897 PGAP2Q9UHJ9 254 aa10.09□□□□□ -0.79
PNKP-229ENST00000637897 CNTNAP1P78357 1384 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms