RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 PDE8AO60658 829 aa18.31■□□□□ 0.52
CACNA1A-249ENST00000637777 BBOX1O75936 387 aa18.31■□□□□ 0.52
CACNA1A-249ENST00000637777 DPY19L2Q6NUT2 758 aa18.31■□□□□ 0.52
CACNA1A-249ENST00000637777 MYH3P11055 1940 aa18.31■□□□□ 0.52
CACNA1A-249ENST00000637777 SF3B3Q15393 1217 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-249ENST00000637777 GRIPAP1Q4V328 841 aa18.3■□□□□ 0.52
CACNA1A-249ENST00000637777 LINS1Q8NG48 757 aa18.3■□□□□ 0.52
CACNA1A-249ENST00000637777 SMC4Q9NTJ3 1288 aa18.3■□□□□ 0.52
CACNA1A-249ENST00000637777 ATP6V0A2Q9Y487 856 aa18.3■□□□□ 0.52
CACNA1A-249ENST00000637777 IARSP41252 1262 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-249ENST00000637777 GCKRQ14397 625 aa18.29■□□□□ 0.52
CACNA1A-249ENST00000637777 DPP8Q6V1X1 898 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-249ENST00000637777 SLC51AQ86UW1 340 aa18.29■□□□□ 0.52
CACNA1A-249ENST00000637777 JDP2Q8WYK2 163 aa18.29■□□□□ 0.52
CACNA1A-249ENST00000637777 NMRK2Q9NPI5 230 aa18.29■□□□□ 0.52
CACNA1A-249ENST00000637777 CDHR2Q9BYE9 1310 aa18.28■□□□□ 0.52
CACNA1A-249ENST00000637777 CTSWP56202 376 aa18.28■□□□□ 0.52
CACNA1A-249ENST00000637777 TMC4Q7Z404 712 aa18.28■□□□□ 0.52
CACNA1A-249ENST00000637777 LARGE2Q8N3Y3 721 aa18.28■□□□□ 0.52
CACNA1A-249ENST00000637777 MPNDQ8N594 471 aa18.28■□□□□ 0.52
CACNA1A-249ENST00000637777 SSH1Q8WYL5 1049 aa18.28■□□□□ 0.52
CACNA1A-249ENST00000637777 CELF1Q92879 486 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-249ENST00000637777 PSMD1Q99460 953 aa18.28■□□□□ 0.52
CACNA1A-249ENST00000637777 GLTPD2A6NH11 291 aa18.27■□□□□ 0.52
CACNA1A-249ENST00000637777 PPIP5K2O43314 1243 aa18.27■□□□□ 0.52
CACNA1A-249ENST00000637777 SP8Q8IXZ3 490 aa18.27■□□□□ 0.52
CACNA1A-249ENST00000637777 MRPL50Q8N5N7 158 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-249ENST00000637777 SUPT20HQ8NEM7 779 aa18.27■□□□□ 0.52
CACNA1A-249ENST00000637777 RRAGCQ9HB90 399 aa18.27■□□□□ 0.52
CACNA1A-249ENST00000637777 C1QTNF8P60827 252 aa18.26■□□□□ 0.51
CACNA1A-249ENST00000637777 SEC31BQ9NQW1 1179 aa18.26■□□□□ 0.51
CACNA1A-249ENST00000637777 C9orf78Q9NZ63 289 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-249ENST00000637777 CHMP3Q9Y3E7 222 aa18.26■□□□□ 0.51
CACNA1A-249ENST00000637777 PTPRCP08575 1304 aa18.25■□□□□ 0.51
CACNA1A-249ENST00000637777 CT47B1P0C2W7 299 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-249ENST00000637777 RPS8P62241 208 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-249ENST00000637777 ALDH1L2Q3SY69 923 aa18.25■□□□□ 0.51
CACNA1A-249ENST00000637777 ANKRD18AQ8IVF6 992 aa18.25■□□□□ 0.51
CACNA1A-249ENST00000637777 NIM1KQ8IY84 436 aa18.25■□□□□ 0.51
CACNA1A-249ENST00000637777 CDC5LQ99459 802 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-249ENST00000637777 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
CACNA1A-249ENST00000637777 NSFL1CQ9UNZ2 370 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-249ENST00000637777 SPEF2Q9C093 1822 aa18.25■□□□□ 0.51
CACNA1A-249ENST00000637777 EIF6P56537 245 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-249ENST00000637777 AOC3Q16853 763 aa18.24■□□□□ 0.51
CACNA1A-249ENST00000637777 BEND3Q5T5X7 828 aa18.24■□□□□ 0.51
CACNA1A-249ENST00000637777 C6orf229H3BNL8 230 aa18.23■□□□□ 0.51
CACNA1A-249ENST00000637777 H7C1W4 665 aa18.23■□□□□ 0.51
CACNA1A-249ENST00000637777 KIF3CO14782 793 aa18.23■□□□□ 0.51
CACNA1A-249ENST00000637777 TRMT2AQ8IZ69 625 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-249ENST00000637777 ANKIB1Q9P2G1 1089 aa18.23■□□□□ 0.51
CACNA1A-249ENST00000637777 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
CACNA1A-249ENST00000637777 TTLL11Q8NHH1 800 aa18.22■□□□□ 0.51
CACNA1A-249ENST00000637777 GREM2Q9H772 168 aa18.22■□□□□ 0.51
CACNA1A-249ENST00000637777 GJA3Q9Y6H8 435 aa18.22■□□□□ 0.51
CACNA1A-249ENST00000637777 LRRC37AA6NMS7 1700 aa18.22■□□□□ 0.51
CACNA1A-249ENST00000637777 SNED1Q8TER0 1413 aa18.22■□□□□ 0.51
CACNA1A-249ENST00000637777 ZNF541Q9H0D2 1346 aa18.22■□□□□ 0.51
CACNA1A-249ENST00000637777 GRM8O00222 908 aa18.21■□□□□ 0.51
CACNA1A-249ENST00000637777 ALDH1L1O75891 902 aa18.21■□□□□ 0.51
CACNA1A-249ENST00000637777 VEGFAP15692 232 aaPredicted RBP18.21■□□□□ 0.51
CACNA1A-249ENST00000637777 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-249ENST00000637777 COL4A1P02462 1669 aa18.2■□□□□ 0.5
CACNA1A-249ENST00000637777 G3V3G9 751 aa18.2■□□□□ 0.5
CACNA1A-249ENST00000637777 GPSM2P81274 684 aa18.2■□□□□ 0.5
CACNA1A-249ENST00000637777 FAM161AQ3B820 660 aa18.2■□□□□ 0.5
CACNA1A-249ENST00000637777 DCAF8Q5TAQ9 597 aa18.2■□□□□ 0.5
CACNA1A-249ENST00000637777 MPHOSPH8Q99549 860 aa18.2■□□□□ 0.5
CACNA1A-249ENST00000637777 RIMBP2O15034 1052 aa18.19■□□□□ 0.5
CACNA1A-249ENST00000637777 TOMM70O94826 608 aa18.19■□□□□ 0.5
CACNA1A-249ENST00000637777 UFL1O94874 794 aa18.19■□□□□ 0.5
CACNA1A-249ENST00000637777 ITGA6P23229 1130 aa18.19■□□□□ 0.5
CACNA1A-249ENST00000637777 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
CACNA1A-249ENST00000637777 TAF7LQ5H9L4 462 aa18.19■□□□□ 0.5
CACNA1A-249ENST00000637777 EYA3Q99504 573 aa18.19■□□□□ 0.5
CACNA1A-249ENST00000637777 PLA2G12BQ9BX93 195 aa18.19■□□□□ 0.5
CACNA1A-249ENST00000637777 NOB1Q9ULX3 412 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-249ENST00000637777 WDR90Q96KV7 1748 aa18.18■□□□□ 0.5
CACNA1A-249ENST00000637777 ANKRD18BA2A2Z9 1011 aa18.18■□□□□ 0.5
CACNA1A-249ENST00000637777 RTFDC1Q9BY42 306 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-249ENST00000637777 VPS33BQ9H267 617 aa18.18■□□□□ 0.5
CACNA1A-249ENST00000637777 GGA1Q9UJY5 639 aa18.18■□□□□ 0.5
CACNA1A-249ENST00000637777 ZBED9Q6R2W3 1325 aa18.18■□□□□ 0.5
CACNA1A-249ENST00000637777 KIF16BQ96L93 1317 aa18.18■□□□□ 0.5
CACNA1A-249ENST00000637777 IQCA1LA6NCM1 817 aa18.17■□□□□ 0.5
CACNA1A-249ENST00000637777 FZD9O00144 591 aa18.17■□□□□ 0.5
CACNA1A-249ENST00000637777 RARSP54136 660 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-249ENST00000637777 CASP7P55210 303 aa18.17■□□□□ 0.5
CACNA1A-249ENST00000637777 IFIT5Q13325 482 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-249ENST00000637777 GPR101Q96P66 508 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-249ENST00000637777 RTL9Q8NET4 1388 aa18.17■□□□□ 0.5
CACNA1A-249ENST00000637777 COL4A5P29400 1685 aa18.16■□□□□ 0.5
CACNA1A-249ENST00000637777 LMOD1P29536 600 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-249ENST00000637777 KIAA2012Q0VF49 1180 aa18.16■□□□□ 0.5
CACNA1A-249ENST00000637777 FRAT1Q92837 279 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-249ENST00000637777 API5Q9BZZ5 524 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-249ENST00000637777 XDHP47989 1333 aa18.16■□□□□ 0.5
CACNA1A-249ENST00000637777 CCDC57Q2TAC2 916 aa18.15■□□□□ 0.5
CACNA1A-249ENST00000637777 EAPPQ56P03 285 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-249ENST00000637777 LMBR1LQ6UX01 489 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms