RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 CCDC184Q52MB2 194 aa29.46■■■□□ 2.31
CHRNA7-229ENST00000637552 TMC4Q7Z404 712 aa29.46■■■□□ 2.31
CHRNA7-229ENST00000637552 RTFDC1Q9BY42 306 aaPredicted RBP29.46■■■□□ 2.31
CHRNA7-229ENST00000637552 PHAXQ9H814 394 aaKnown RBP29.46■■■□□ 2.31
CHRNA7-229ENST00000637552 TRIM28Q13263 835 aaKnown RBP29.45■■■□□ 2.31
CHRNA7-229ENST00000637552 RTL5Q5HYW3 569 aaPredicted RBP29.45■■■□□ 2.31
CHRNA7-229ENST00000637552 C8orf58Q8NAV2 365 aa29.45■■■□□ 2.31
CHRNA7-229ENST00000637552 MKRN1Q9UHC7 482 aaKnown RBP29.44■■■□□ 2.3
CHRNA7-229ENST00000637552 LTBP1Q14766 1721 aa29.43■■■□□ 2.3
CHRNA7-229ENST00000637552 SCNN1DP51172 638 aa29.43■■■□□ 2.3
CHRNA7-229ENST00000637552 ZNRF3Q9ULT6 936 aa29.43■■■□□ 2.3
CHRNA7-229ENST00000637552 IRS4O14654 1257 aaPredicted RBP29.42■■■□□ 2.3
CHRNA7-229ENST00000637552 ITGBL1O95965 494 aaPredicted RBP29.42■■■□□ 2.3
CHRNA7-229ENST00000637552 SF3B3Q15393 1217 aaKnown RBP29.42■■■□□ 2.3
CHRNA7-229ENST00000637552 CCDC30Q5VVM6 783 aa29.42■■■□□ 2.3
CHRNA7-229ENST00000637552 MAP1SQ66K74 1059 aaPredicted RBP29.42■■■□□ 2.3
CHRNA7-229ENST00000637552 LRRC37AA6NMS7 1700 aa29.42■■■□□ 2.3
CHRNA7-229ENST00000637552 KIAA2012Q0VF49 1180 aa29.41■■■□□ 2.3
CHRNA7-229ENST00000637552 CNTROBQ8N137 903 aa29.41■■■□□ 2.3
CHRNA7-229ENST00000637552 MYD88Q99836 296 aa29.41■■■□□ 2.3
CHRNA7-229ENST00000637552 TMEM88BA6NKF7 163 aa29.4■■■□□ 2.3
CHRNA7-229ENST00000637552 DDX58O95786 925 aaKnown RBP29.4■■■□□ 2.3
CHRNA7-229ENST00000637552 EPS15P42566 896 aa29.4■■■□□ 2.3
CHRNA7-229ENST00000637552 HSP90B1P14625 803 aaKnown RBP29.39■■■□□ 2.3
CHRNA7-229ENST00000637552 ZBTB38Q8NAP3 1195 aaPredicted RBP29.39■■■□□ 2.3
CHRNA7-229ENST00000637552 CELF1Q92879 486 aaKnown RBP29.39■■■□□ 2.3
CHRNA7-229ENST00000637552 HSPA1AP0DMV8 641 aaKnown RBP29.38■■■□□ 2.29
CHRNA7-229ENST00000637552 HSPA1BP0DMV9 641 aaKnown RBP29.38■■■□□ 2.29
CHRNA7-229ENST00000637552 CXCL9Q07325 125 aa29.38■■■□□ 2.29
CHRNA7-229ENST00000637552 CCDC27Q2M243 656 aa29.38■■■□□ 2.29
CHRNA7-229ENST00000637552 TSR2Q969E8 191 aaKnown RBP29.38■■■□□ 2.29
CHRNA7-229ENST00000637552 MRS2Q9HD23 443 aa29.38■■■□□ 2.29
CHRNA7-229ENST00000637552 DUOX1Q9NRD9 1551 aa29.38■■■□□ 2.29
CHRNA7-229ENST00000637552 CNTNAP1P78357 1384 aa29.38■■■□□ 2.29
CHRNA7-229ENST00000637552 USP50Q70EL3 339 aaPredicted RBP29.37■■■□□ 2.29
CHRNA7-229ENST00000637552 TSPYL6Q8N831 410 aa29.37■■■□□ 2.29
CHRNA7-229ENST00000637552 CCDC191Q8NCU4 936 aa29.37■■■□□ 2.29
CHRNA7-229ENST00000637552 ANP32CO43423 234 aa29.36■■■□□ 2.29
CHRNA7-229ENST00000637552 CIAPIN1Q6FI81 312 aa29.36■■■□□ 2.29
CHRNA7-229ENST00000637552 WWC1Q8IX03 1113 aa29.36■■■□□ 2.29
CHRNA7-229ENST00000637552 GPRC5DQ9NZD1 345 aa29.36■■■□□ 2.29
CHRNA7-229ENST00000637552 STK31Q9BXU1 1019 aa29.35■■■□□ 2.29
CHRNA7-229ENST00000637552 CWC25Q9NXE8 425 aaPredicted RBP29.35■■■□□ 2.29
CHRNA7-229ENST00000637552 NSFL1CQ9UNZ2 370 aaKnown RBP29.35■■■□□ 2.29
CHRNA7-229ENST00000637552 ZNF316A6NFI3 1004 aaPredicted RBP29.34■■■□□ 2.29
CHRNA7-229ENST00000637552 TNIP1Q15025 636 aa29.34■■■□□ 2.29
CHRNA7-229ENST00000637552 METTL22Q9BUU2 404 aaPredicted RBP29.34■■■□□ 2.29
CHRNA7-229ENST00000637552 ADARB2Q9NS39 739 aaKnown RBP29.34■■■□□ 2.29
CHRNA7-229ENST00000637552 RAD17O75943 681 aa29.33■■■□□ 2.29
CHRNA7-229ENST00000637552 PCCAP05165 728 aaPredicted RBP29.33■■■□□ 2.29
CHRNA7-229ENST00000637552 GMPSP49915 693 aaPredicted RBP29.33■■■□□ 2.29
CHRNA7-229ENST00000637552 BCL2L13Q9BXK5 485 aa29.33■■■□□ 2.29
CHRNA7-229ENST00000637552 COL4A1P02462 1669 aa29.32■■■□□ 2.28
CHRNA7-229ENST00000637552 RPS8P62241 208 aaKnown RBP29.32■■■□□ 2.28
CHRNA7-229ENST00000637552 WASHC4Q2M389 1173 aa29.32■■■□□ 2.28
CHRNA7-229ENST00000637552 MAP3K2Q9Y2U5 619 aa29.32■■■□□ 2.28
CHRNA7-229ENST00000637552 CDHR2Q9BYE9 1310 aa29.31■■■□□ 2.28
CHRNA7-229ENST00000637552 C6orf229H3BNL8 230 aa29.31■■■□□ 2.28
CHRNA7-229ENST00000637552 CCDC152Q4G0S7 254 aa29.31■■■□□ 2.28
CHRNA7-229ENST00000637552 COL13A1Q5TAT6 717 aaPredicted RBP29.31■■■□□ 2.28
CHRNA7-229ENST00000637552 IL16Q14005 1332 aa29.3■■■□□ 2.28
CHRNA7-229ENST00000637552 GPSM2P81274 684 aa29.3■■■□□ 2.28
CHRNA7-229ENST00000637552 TWISTNBQ3B726 338 aaPredicted RBP29.3■■■□□ 2.28
CHRNA7-229ENST00000637552 PDE8AO60658 829 aa29.29■■■□□ 2.28
CHRNA7-229ENST00000637552 KSR2Q6VAB6 950 aa29.29■■■□□ 2.28
CHRNA7-229ENST00000637552 EYA3Q99504 573 aa29.29■■■□□ 2.28
CHRNA7-229ENST00000637552 SEC31BQ9NQW1 1179 aa29.29■■■□□ 2.28
CHRNA7-229ENST00000637552 ABT1Q9ULW3 272 aaKnown RBP29.29■■■□□ 2.28
CHRNA7-229ENST00000637552 PI4KAP2A4QPH2 592 aa29.28■■■□□ 2.28
CHRNA7-229ENST00000637552 YDJCA8MPS7 323 aa29.28■■■□□ 2.28
CHRNA7-229ENST00000637552 NEXNQ0ZGT2 675 aa29.28■■■□□ 2.28
CHRNA7-229ENST00000637552 PI4KAP1Q8N8J0 262 aa29.28■■■□□ 2.28
CHRNA7-229ENST00000637552 JARID2Q92833 1246 aaPredicted RBP29.28■■■□□ 2.28
CHRNA7-229ENST00000637552 POLLQ9UGP5 575 aa29.28■■■□□ 2.28
CHRNA7-229ENST00000637552 RIMBP2O15034 1052 aa29.27■■■□□ 2.28
CHRNA7-229ENST00000637552 VEGFBP49765 207 aa29.27■■■□□ 2.28
CHRNA7-229ENST00000637552 NCBP3Q53F19 620 aaKnown RBP29.27■■■□□ 2.28
CHRNA7-229ENST00000637552 DBNDD1Q9H9R9 158 aa29.27■■■□□ 2.28
CHRNA7-229ENST00000637552 CCDC85AQ96PX6 553 aaPredicted RBP29.26■■■□□ 2.27
CHRNA7-229ENST00000637552 RASSF10A6NK89 507 aa29.25■■■□□ 2.27
CHRNA7-229ENST00000637552 TRPM7Q96QT4 1865 aa29.25■■■□□ 2.27
CHRNA7-229ENST00000637552 DEFB115Q30KQ5 88 aa29.24■■■□□ 2.27
CHRNA7-229ENST00000637552 TBC1D16Q8TBP0 767 aa29.24■■■□□ 2.27
CHRNA7-229ENST00000637552 ANKIB1Q9P2G1 1089 aa29.24■■■□□ 2.27
CHRNA7-229ENST00000637552 SALL2Q9Y467 1007 aaPredicted RBP29.24■■■□□ 2.27
CHRNA7-229ENST00000637552 SLC4A2P04920 1241 aa29.23■■■□□ 2.27
CHRNA7-229ENST00000637552 FMR1Q06787 632 aaKnown RBP eCLIP29.23■■■□□ 2.27
CHRNA7-229ENST00000637552 CNOT7Q9UIV1 285 aaKnown RBP29.23■■■□□ 2.27
CHRNA7-229ENST00000637552 FANCIQ9NVI1 1328 aa29.22■■■□□ 2.27
CHRNA7-229ENST00000637552 H7C1D1 291 aa29.22■■■□□ 2.27
CHRNA7-229ENST00000637552 TRAF5O00463 557 aa29.22■■■□□ 2.27
CHRNA7-229ENST00000637552 ECE2O60344 883 aa29.22■■■□□ 2.27
CHRNA7-229ENST00000637552 UFL1O94874 794 aa29.22■■■□□ 2.27
CHRNA7-229ENST00000637552 IGKV5-2P06315 115 aa29.22■■■□□ 2.27
CHRNA7-229ENST00000637552 GPR101Q96P66 508 aaPredicted RBP29.22■■■□□ 2.27
CHRNA7-229ENST00000637552 PODXL2Q9NZ53 605 aa29.22■■■□□ 2.27
CHRNA7-229ENST00000637552 PSMD14O00487 310 aa29.21■■■□□ 2.27
CHRNA7-229ENST00000637552 DOK7Q18PE1 504 aa29.21■■■□□ 2.27
CHRNA7-229ENST00000637552 G2E3Q7L622 706 aa29.21■■■□□ 2.27
CHRNA7-229ENST00000637552 ANKRD18AQ8IVF6 992 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms