RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 TUBGCP6Q96RT7 1819 aa18.9■□□□□ 0.62
CLN6-219ENST00000637329 CIAO1O76071 339 aa18.89■□□□□ 0.61
CLN6-219ENST00000637329 MX1P20591 662 aa18.89■□□□□ 0.61
CLN6-219ENST00000637329 TTC22Q5TAA0 569 aa18.89■□□□□ 0.61
CLN6-219ENST00000637329 PROM2Q8N271 834 aa18.89■□□□□ 0.61
CLN6-219ENST00000637329 CLASRPQ8N2M8 674 aaKnown RBP18.89■□□□□ 0.61
CLN6-219ENST00000637329 CHMP3Q9Y3E7 222 aa18.89■□□□□ 0.61
CLN6-219ENST00000637329 CHD4Q14839 1912 aa18.89■□□□□ 0.61
CLN6-219ENST00000637329 CARMIL3Q8ND23 1372 aa18.89■□□□□ 0.61
CLN6-219ENST00000637329 RIC1Q4ADV7 1423 aa18.89■□□□□ 0.61
CLN6-219ENST00000637329 QSER1Q2KHR3 1735 aa18.88■□□□□ 0.61
CLN6-219ENST00000637329 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
CLN6-219ENST00000637329 CCDC57Q2TAC2 916 aa18.88■□□□□ 0.61
CLN6-219ENST00000637329 AMIGO3Q86WK7 504 aa18.88■□□□□ 0.61
CLN6-219ENST00000637329 PHF14O94880 888 aa18.87■□□□□ 0.61
CLN6-219ENST00000637329 PDE1AP54750 535 aa18.87■□□□□ 0.61
CLN6-219ENST00000637329 TBC1D9BQ66K14 1250 aa18.87■□□□□ 0.61
CLN6-219ENST00000637329 TTLL11Q8NHH1 800 aa18.87■□□□□ 0.61
CLN6-219ENST00000637329 SYT17Q9BSW7 474 aa18.87■□□□□ 0.61
CLN6-219ENST00000637329 SRP68Q9UHB9 627 aaKnown RBP18.87■□□□□ 0.61
CLN6-219ENST00000637329 TTC41PQ6P2S7 1318 aa18.86■□□□□ 0.61
CLN6-219ENST00000637329 SASH1O94885 1247 aa18.86■□□□□ 0.61
CLN6-219ENST00000637329 ZBTB7AO95365 584 aa18.86■□□□□ 0.61
CLN6-219ENST00000637329 IL15P40933 162 aaPredicted RBP18.86■□□□□ 0.61
CLN6-219ENST00000637329 IFIT5Q13325 482 aaKnown RBP18.86■□□□□ 0.61
CLN6-219ENST00000637329 C16orf71Q8IYS4 520 aaPredicted RBP18.86■□□□□ 0.61
CLN6-219ENST00000637329 FLAD1Q8NFF5 587 aa18.86■□□□□ 0.61
CLN6-219ENST00000637329 OTUD7AQ8TE49 926 aaPredicted RBP18.86■□□□□ 0.61
CLN6-219ENST00000637329 AKT1S1Q96B36 256 aa18.86■□□□□ 0.61
CLN6-219ENST00000637329 GPATCH3Q96I76 525 aa18.86■□□□□ 0.61
CLN6-219ENST00000637329 SETDB2Q96T68 719 aa18.86■□□□□ 0.61
CLN6-219ENST00000637329 SIL1Q9H173 461 aa18.86■□□□□ 0.61
CLN6-219ENST00000637329 IL1RAPL2Q9NP60 686 aa18.86■□□□□ 0.61
CLN6-219ENST00000637329 CASZ1Q86V15 1759 aa18.86■□□□□ 0.61
CLN6-219ENST00000637329 EYA2O00167 538 aa18.85■□□□□ 0.61
CLN6-219ENST00000637329 KLHDC4Q8TBB5 520 aa18.85■□□□□ 0.61
CLN6-219ENST00000637329 FHDC1Q9C0D6 1143 aaPredicted RBP18.85■□□□□ 0.61
CLN6-219ENST00000637329 GPR108Q9NPR9 543 aa18.85■□□□□ 0.61
CLN6-219ENST00000637329 ATF5Q9Y2D1 282 aaPredicted RBP18.85■□□□□ 0.61
CLN6-219ENST00000637329 UTRNP46939 3433 aa18.85■□□□□ 0.61
CLN6-219ENST00000637329 ZNF609O15014 1411 aa18.84■□□□□ 0.61
CLN6-219ENST00000637329 ANKRD18BA2A2Z9 1011 aa18.84■□□□□ 0.61
CLN6-219ENST00000637329 GSPT1P15170 499 aaKnown RBP18.84■□□□□ 0.61
CLN6-219ENST00000637329 CCDC152Q4G0S7 254 aa18.84■□□□□ 0.61
CLN6-219ENST00000637329 SYNE4Q8N205 404 aa18.84■□□□□ 0.61
CLN6-219ENST00000637329 EIF5BO60841 1220 aaKnown RBP18.83■□□□□ 0.6
CLN6-219ENST00000637329 IFIT2P09913 472 aaKnown RBP18.83■□□□□ 0.6
CLN6-219ENST00000637329 ITGA6P23229 1130 aa18.83■□□□□ 0.6
CLN6-219ENST00000637329 TAF7LQ5H9L4 462 aa18.83■□□□□ 0.6
CLN6-219ENST00000637329 ATG9AQ7Z3C6 839 aa18.83■□□□□ 0.6
CLN6-219ENST00000637329 ABCC12Q96J65 1359 aa18.82■□□□□ 0.6
CLN6-219ENST00000637329 GYS1P13807 737 aa18.82■□□□□ 0.6
CLN6-219ENST00000637329 ZNF827Q17R98 1081 aa18.82■□□□□ 0.6
CLN6-219ENST00000637329 SLC10A5Q5PT55 438 aa18.82■□□□□ 0.6
CLN6-219ENST00000637329 NBPF5PQ86XG9 351 aaPredicted RBP18.82■□□□□ 0.6
CLN6-219ENST00000637329 GREM2Q9H772 168 aa18.82■□□□□ 0.6
CLN6-219ENST00000637329 STK32BQ9NY57 414 aa18.82■□□□□ 0.6
CLN6-219ENST00000637329 ERC2O15083 957 aa18.81■□□□□ 0.6
CLN6-219ENST00000637329 GPR162Q16538 588 aa18.81■□□□□ 0.6
CLN6-219ENST00000637329 TPTE2Q6XPS3 522 aa18.81■□□□□ 0.6
CLN6-219ENST00000637329 SMIM5Q71RC9 77 aa18.81■□□□□ 0.6
CLN6-219ENST00000637329 AACSQ86V21 672 aa18.81■□□□□ 0.6
CLN6-219ENST00000637329 TFCP2L1Q9NZI6 479 aa18.81■□□□□ 0.6
CLN6-219ENST00000637329 CEP350Q5VT06 3117 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 FAM177BA6PVY3 158 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 CDC45O75419 566 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 GLRX3O76003 335 aaKnown RBP18.8■□□□□ 0.6
CLN6-219ENST00000637329 HCLS1P14317 486 aaPredicted RBP18.8■□□□□ 0.6
CLN6-219ENST00000637329 PTGER2P43116 358 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 TFCP2Q12800 502 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 SF3B3Q15393 1217 aaKnown RBP18.8■□□□□ 0.6
CLN6-219ENST00000637329 ERFEQ4G0M1 354 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 TNNI3KQ59H18 835 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 BICDL1Q6ZP65 573 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 NUTM1Q86Y26 1132 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 ECHDC1Q9NTX5 307 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 RBM19Q9Y4C8 960 aaKnown RBP18.8■□□□□ 0.6
CLN6-219ENST00000637329 FPGT-TNNI3KV9GXZ4 949 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 ARAP2Q8WZ64 1704 aa18.8■□□□□ 0.6
CLN6-219ENST00000637329 TNRC6CQ9HCJ0 1690 aaKnown RBP18.79■□□□□ 0.6
CLN6-219ENST00000637329 NFIXQ14938 502 aa18.79■□□□□ 0.6
CLN6-219ENST00000637329 PI4K2BQ8TCG2 481 aa18.79■□□□□ 0.6
CLN6-219ENST00000637329 EAF2Q96CJ1 260 aaPredicted RBP18.79■□□□□ 0.6
CLN6-219ENST00000637329 MTFR1LQ9H019 292 aa18.79■□□□□ 0.6
CLN6-219ENST00000637329 NRXN2Q9P2S2 1712 aa18.79■□□□□ 0.6
CLN6-219ENST00000637329 GTF2E1P29083 439 aaPredicted RBP18.78■□□□□ 0.6
CLN6-219ENST00000637329 ZNF594Q96JF6 807 aaPredicted RBP18.78■□□□□ 0.6
CLN6-219ENST00000637329 CDC5LQ99459 802 aaKnown RBP18.78■□□□□ 0.6
CLN6-219ENST00000637329 AKAP2Q9Y2D5 859 aa18.78■□□□□ 0.6
CLN6-219ENST00000637329 SDSP20132 328 aa18.77■□□□□ 0.6
CLN6-219ENST00000637329 LRRC24Q50LG9 513 aa18.77■□□□□ 0.6
CLN6-219ENST00000637329 CASC1Q6TDU7 716 aa18.77■□□□□ 0.6
CLN6-219ENST00000637329 LDHAL6AQ6ZMR3 332 aa18.77■□□□□ 0.6
CLN6-219ENST00000637329 CNBD1Q8NA66 436 aa18.77■□□□□ 0.6
CLN6-219ENST00000637329 BCL11AQ9H165 835 aa18.77■□□□□ 0.6
CLN6-219ENST00000637329 ANO8Q9HCE9 1232 aaPredicted RBP18.77■□□□□ 0.6
CLN6-219ENST00000637329 CEP126Q9P2H0 1117 aa18.77■□□□□ 0.6
CLN6-219ENST00000637329 MROH5Q6ZUA9 1318 aa18.76■□□□□ 0.59
CLN6-219ENST00000637329 CCDC85AQ96PX6 553 aaPredicted RBP18.76■□□□□ 0.59
CLN6-219ENST00000637329 UPF2Q9HAU5 1272 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms