RNA–Protein interactions for RNA: ENST00000637175.1

ATRX-223, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-223	ENST00000637175	NIF3L1	Q9GZT8	377 aa		5.41	□□□□□ -1.54
ATRX-223	ENST00000637175	AVEN	Q9NQS1	362 aa	Predicted RBP	5.41	□□□□□ -1.54
ATRX-223	ENST00000637175	MBIP	Q9NS73	344 aa		5.41	□□□□□ -1.54
ATRX-223	ENST00000637175	FOXD3	Q9UJU5	478 aa	Predicted RBP	5.41	□□□□□ -1.54
ATRX-223	ENST00000637175	RBM47	A0AV96	593 aa	Known RBP	5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	SASH3	O75995	380 aa		5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	NFKB1	P19838	968 aa		5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	TARS	P26639	723 aa	Known RBP	5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	PLCB3	Q01970	1234 aa		5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	ORC1	Q13415	861 aa		5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	RNFT1	Q5M7Z0	435 aa		5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	LCE2C	Q5TA81	110 aa		5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	TTC16	Q8NEE8	873 aa		5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	CSRNP1	Q96S65	589 aa		5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	DNAJC25	Q9H1X3	360 aa		5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	ABI2	Q9NYB9	513 aa	Predicted RBP	5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	CNTN3	Q9P232	1028 aa		5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	5.4	□□□□□ -1.54
ATRX-223	ENST00000637175	EIF1AY	O14602	144 aa	Known RBP	5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	MMP20	O60882	483 aa		5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	NEFL	P07196	543 aa		5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	RARA	P10276	462 aa		5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	BMP4	P12644	408 aa		5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	MX2	P20592	715 aa		5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	SOX18	P35713	384 aa		5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	KRT76	Q01546	638 aa		5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	EAPP	Q56P03	285 aa	Predicted RBP	5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	ZNF468	Q5VIY5	522 aa	Predicted RBP	5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	RAB44	Q7Z6P3	723 aa	Predicted RBP	5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	OR13H1	Q8NG92	308 aa		5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	SLC16A10	Q8TF71	515 aa		5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	MDFI	Q99750	246 aa		5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	COL25A1	Q9BXS0	654 aa	Predicted RBP	5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	ZFYVE28	Q9HCC9	887 aa		5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	TLR7	Q9NYK1	1049 aa	Known RBP	5.39	□□□□□ -1.55
ATRX-223	ENST00000637175	CPNE3	O75131	537 aa	Known RBP	5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	SIN3B	O75182	1162 aa		5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	ARAF	P10398	606 aa		5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	MAP2K3	P46734	347 aa		5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	KRT25	Q7Z3Z0	450 aa		5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	C1orf127	Q8N9H9	656 aa		5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	IRF7	Q92985	503 aa		5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	TNFRSF25	Q93038	417 aa		5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	BHMT	Q93088	406 aa		5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	PNMA5	Q96PV4	448 aa		5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	BCL2L13	Q9BXK5	485 aa		5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	KLF15	Q9UIH9	416 aa		5.38	□□□□□ -1.55
ATRX-223	ENST00000637175	PNMA6F	A0A0J9YX94	578 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	EREG	O14944	169 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	PHACTR2	O75167	634 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	KIF4A	O95239	1232 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	CYP2E1	P05181	493 aa	Predicted RBP	5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	ZNF16	P17020	682 aa	Predicted RBP	5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	MAPK8	P45983	427 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	NRL	P54845	237 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	TAGLN	Q01995	201 aa	Known RBP	5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	NEUROD1	Q13562	356 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	TTC39B	Q5VTQ0	682 aa	Predicted RBP	5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	USPL1	Q5W0Q7	1092 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	DHX32	Q7L7V1	743 aa	Known RBP	5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	SYT9	Q86SS6	491 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	TRPM4	Q8TD43	1214 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	FBF1	Q8TES7	1133 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	GIPC2	Q8TF65	315 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	SETDB2	Q96T68	719 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	WWC3	Q9ULE0	1092 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	IGF1R	P08069	1367 aa		5.37	□□□□□ -1.55
ATRX-223	ENST00000637175	ZBTB42	B2RXF5	422 aa		5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	PRPF40A	O75400	957 aa	Known RBP	5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	LDHB	P07195	334 aa	Known RBP	5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	GPLD1	P80108	840 aa		5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	PLAUR	Q03405	335 aa		5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	SRSF11	Q05519	484 aa	Known RBP	5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	LCE2A	Q5TA79	106 aa	Predicted RBP	5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	GALNT12	Q8IXK2	581 aa		5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	PMEPA1	Q969W9	287 aa		5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	SALL4	Q9UJQ4	1053 aa		5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	PRR12	Q9ULL5	1215 aa		5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	NSFL1C	Q9UNZ2	370 aa	Known RBP	5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	5.36	□□□□□ -1.55
ATRX-223	ENST00000637175	ADARB2-AS1	A8MUL3	147 aa		5.35	□□□□□ -1.55
ATRX-223	ENST00000637175	PSAP	P07602	524 aa		5.35	□□□□□ -1.55
ATRX-223	ENST00000637175	CES1	P23141	567 aa		5.35	□□□□□ -1.55
ATRX-223	ENST00000637175	ADH6	P28332	368 aa		5.35	□□□□□ -1.55
ATRX-223	ENST00000637175	PCBP4	P57723	403 aa	Known RBP	5.35	□□□□□ -1.55
ATRX-223	ENST00000637175	FGD1	P98174	961 aa		5.35	□□□□□ -1.55
ATRX-223	ENST00000637175	ATP2B2	Q01814	1243 aa		5.35	□□□□□ -1.55
ATRX-223	ENST00000637175	COL13A1	Q5TAT6	717 aa	Predicted RBP	5.35	□□□□□ -1.55
ATRX-223	ENST00000637175	ALG1L	Q6GMV1	187 aa		5.35	□□□□□ -1.55
ATRX-223	ENST00000637175	FCHSD1	Q86WN1	690 aa		5.35	□□□□□ -1.55
ATRX-223	ENST00000637175	CCDC74A	Q96AQ1	378 aa		5.35	□□□□□ -1.55
ATRX-223	ENST00000637175	UNCX	A6NJT0	531 aa		5.34	□□□□□ -1.55
ATRX-223	ENST00000637175	PHF20L1	A8MW92	1017 aa		5.34	□□□□□ -1.55
ATRX-223	ENST00000637175	WFS1	O76024	890 aa		5.34	□□□□□ -1.55
ATRX-223	ENST00000637175	SLURP2	P0DP57	97 aa		5.34	□□□□□ -1.55
ATRX-223	ENST00000637175	ZNF326	Q5BKZ1	582 aa	Known RBP	5.34	□□□□□ -1.55
ATRX-223	ENST00000637175	SLCO4C1	Q6ZQN7	724 aa		5.34	□□□□□ -1.55
ATRX-223	ENST00000637175	ZNF428	Q96B54	188 aa		5.34	□□□□□ -1.55
ATRX-223	ENST00000637175	ZNF775	Q96BV0	537 aa	Predicted RBP	5.34	□□□□□ -1.55
ATRX-223	ENST00000637175	CNTNAP3B	Q96NU0	1288 aa		5.34	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms