RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 CTSWP56202 376 aa10.35□□□□□ -0.75
PNKP-226ENST00000636840 FKBP4Q02790 459 aaKnown RBP eCLIP10.35□□□□□ -0.75
PNKP-226ENST00000636840 C9orf131Q5VYM1 1079 aa10.35□□□□□ -0.75
PNKP-226ENST00000636840 C3orf67Q6ZVT6 689 aa10.35□□□□□ -0.75
PNKP-226ENST00000636840 ANKRD18AQ8IVF6 992 aa10.35□□□□□ -0.75
PNKP-226ENST00000636840 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.35□□□□□ -0.75
PNKP-226ENST00000636840 TTLL11Q8NHH1 800 aa10.35□□□□□ -0.75
PNKP-226ENST00000636840 C7orf43Q8WVR3 580 aa10.35□□□□□ -0.75
PNKP-226ENST00000636840 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
PNKP-226ENST00000636840 PLA2G12BQ9BX93 195 aa10.35□□□□□ -0.75
PNKP-226ENST00000636840 ATP6V0A2Q9Y487 856 aa10.35□□□□□ -0.75
PNKP-226ENST00000636840 ABCC4O15439 1325 aa10.34□□□□□ -0.75
PNKP-226ENST00000636840 IGHMBP2P38935 993 aaKnown RBP10.34□□□□□ -0.75
PNKP-226ENST00000636840 CCDC57Q2TAC2 916 aa10.34□□□□□ -0.75
PNKP-226ENST00000636840 TAF7LQ5H9L4 462 aa10.34□□□□□ -0.75
PNKP-226ENST00000636840 DPY19L2Q6NUT2 758 aa10.34□□□□□ -0.75
PNKP-226ENST00000636840 DPP8Q6V1X1 898 aaPredicted RBP10.34□□□□□ -0.75
PNKP-226ENST00000636840 ATF7IPQ6VMQ6 1270 aa10.34□□□□□ -0.75
PNKP-226ENST00000636840 MPNDQ8N594 471 aa10.34□□□□□ -0.75
PNKP-226ENST00000636840 VPS33BQ9H267 617 aa10.34□□□□□ -0.75
PNKP-226ENST00000636840 RNF181Q9P0P0 153 aa10.34□□□□□ -0.75
PNKP-226ENST00000636840 CHMP3Q9Y3E7 222 aa10.34□□□□□ -0.75
PNKP-226ENST00000636840 ANKRD31Q8N7Z5 1873 aa10.34□□□□□ -0.75
PNKP-226ENST00000636840 LTBP3Q9NS15 1303 aa10.33□□□□□ -0.76
PNKP-226ENST00000636840 ANKRD18BA2A2Z9 1011 aa10.33□□□□□ -0.76
PNKP-226ENST00000636840 CSF1RP07333 972 aa10.33□□□□□ -0.76
PNKP-226ENST00000636840 GNAI3P08754 354 aa10.33□□□□□ -0.76
PNKP-226ENST00000636840 IFIT5Q13325 482 aaKnown RBP10.33□□□□□ -0.76
PNKP-226ENST00000636840 FTSJ3Q8IY81 847 aaKnown RBP10.33□□□□□ -0.76
PNKP-226ENST00000636840 JDP2Q8WYK2 163 aa10.33□□□□□ -0.76
PNKP-226ENST00000636840 CCDC85AQ96PX6 553 aaPredicted RBP10.33□□□□□ -0.76
PNKP-226ENST00000636840 PSMD1Q99460 953 aa10.33□□□□□ -0.76
PNKP-226ENST00000636840 MPHOSPH8Q99549 860 aa10.33□□□□□ -0.76
PNKP-226ENST00000636840 RCAN3Q9UKA8 241 aa10.33□□□□□ -0.76
PNKP-226ENST00000636840 CHD4Q14839 1912 aa10.33□□□□□ -0.76
PNKP-226ENST00000636840 UBTFL1P0CB47 393 aaPredicted RBP10.32□□□□□ -0.76
PNKP-226ENST00000636840 ITGA6P23229 1130 aa10.32□□□□□ -0.76
PNKP-226ENST00000636840 CASP7P55210 303 aa10.32□□□□□ -0.76
PNKP-226ENST00000636840 RASSF7Q02833 373 aa10.32□□□□□ -0.76
PNKP-226ENST00000636840 INTS3Q68E01 1043 aaKnown RBP10.32□□□□□ -0.76
PNKP-226ENST00000636840 LMBR1LQ6UX01 489 aa10.32□□□□□ -0.76
PNKP-226ENST00000636840 CELF1Q92879 486 aaKnown RBP10.32□□□□□ -0.76
PNKP-226ENST00000636840 EYA3Q99504 573 aa10.32□□□□□ -0.76
PNKP-226ENST00000636840 SEC31BQ9NQW1 1179 aa10.32□□□□□ -0.76
PNKP-226ENST00000636840 ANKIB1Q9P2G1 1089 aa10.32□□□□□ -0.76
PNKP-226ENST00000636840 NSFL1CQ9UNZ2 370 aaKnown RBP10.32□□□□□ -0.76
PNKP-226ENST00000636840 ARFGEF1Q9Y6D6 1849 aa10.32□□□□□ -0.76
PNKP-226ENST00000636840 ZC3H4Q9UPT8 1303 aaKnown RBP10.32□□□□□ -0.76
PNKP-226ENST00000636840 SLX4Q8IY92 1834 aa10.31□□□□□ -0.76
PNKP-226ENST00000636840 KIAA1551Q9HCM1 1747 aa10.31□□□□□ -0.76
PNKP-226ENST00000636840 G3V3G9 751 aa10.31□□□□□ -0.76
PNKP-226ENST00000636840 C6orf229H3BNL8 230 aa10.31□□□□□ -0.76
PNKP-226ENST00000636840 NFKBIEO00221 500 aa10.31□□□□□ -0.76
PNKP-226ENST00000636840 DCAF8Q5TAQ9 597 aa10.31□□□□□ -0.76
PNKP-226ENST00000636840 DZIP1LQ8IYY4 767 aaKnown RBP10.31□□□□□ -0.76
PNKP-226ENST00000636840 CLUAP1Q96AJ1 413 aa10.31□□□□□ -0.76
PNKP-226ENST00000636840 ANKRD2Q9GZV1 360 aa10.31□□□□□ -0.76
PNKP-226ENST00000636840 USP44Q9H0E7 712 aa10.31□□□□□ -0.76
PNKP-226ENST00000636840 CHMP4BQ9H444 224 aaKnown RBP10.31□□□□□ -0.76
PNKP-226ENST00000636840 GREM2Q9H772 168 aa10.31□□□□□ -0.76
PNKP-226ENST00000636840 BSDC1Q9NW68 430 aaPredicted RBP10.31□□□□□ -0.76
PNKP-226ENST00000636840 UTYO14607 1347 aa10.31□□□□□ -0.76
PNKP-226ENST00000636840 BRCA1P38398 1863 aaKnown RBP10.3□□□□□ -0.76
PNKP-226ENST00000636840 RTL9Q8NET4 1388 aa10.3□□□□□ -0.76
PNKP-226ENST00000636840 NBPF7P0C2Y1 421 aaPredicted RBP10.3□□□□□ -0.76
PNKP-226ENST00000636840 TRIM27P14373 513 aa10.3□□□□□ -0.76
PNKP-226ENST00000636840 IARSP41252 1262 aaKnown RBP10.3□□□□□ -0.76
PNKP-226ENST00000636840 FOXO4P98177 505 aa10.3□□□□□ -0.76
PNKP-226ENST00000636840 OLFM4Q6UX06 510 aa10.3□□□□□ -0.76
PNKP-226ENST00000636840 LARGE2Q8N3Y3 721 aa10.3□□□□□ -0.76
PNKP-226ENST00000636840 SUCLG2Q96I99 432 aa10.3□□□□□ -0.76
PNKP-226ENST00000636840 ZC3H12CQ9C0D7 883 aaKnown RBP10.3□□□□□ -0.76
PNKP-226ENST00000636840 ZNF277Q9NRM2 450 aaPredicted RBP10.3□□□□□ -0.76
PNKP-226ENST00000636840 KDM2BQ8NHM5 1336 aa10.3□□□□□ -0.76
PNKP-226ENST00000636840 DLEC1Q9Y238 1755 aa10.29□□□□□ -0.76
PNKP-226ENST00000636840 PPIP5K2O43314 1243 aa10.29□□□□□ -0.76
PNKP-226ENST00000636840 ATP2B4P23634 1241 aa10.29□□□□□ -0.76
PNKP-226ENST00000636840 EIF6P56537 245 aaKnown RBP10.29□□□□□ -0.76
PNKP-226ENST00000636840 WASHC4Q2M389 1173 aa10.29□□□□□ -0.76
PNKP-226ENST00000636840 LDHAL6AQ6ZMR3 332 aa10.29□□□□□ -0.76
PNKP-226ENST00000636840 NIM1KQ8IY84 436 aa10.29□□□□□ -0.76
PNKP-226ENST00000636840 RTFDC1Q9BY42 306 aaPredicted RBP10.29□□□□□ -0.76
PNKP-226ENST00000636840 GPBP1L1Q9HC44 474 aaPredicted RBP10.29□□□□□ -0.76
PNKP-226ENST00000636840 CNNM1Q9NRU3 951 aa10.29□□□□□ -0.76
PNKP-226ENST00000636840 GGA1Q9UJY5 639 aa10.29□□□□□ -0.76
PNKP-226ENST00000636840 GOLGB1Q14789 3259 aaKnown RBP10.28□□□□□ -0.76
PNKP-226ENST00000636840 GLTPD2A6NH11 291 aa10.28□□□□□ -0.76
PNKP-226ENST00000636840 KCNJ4P48050 445 aa10.28□□□□□ -0.76
PNKP-226ENST00000636840 FAM161AQ3B820 660 aa10.28□□□□□ -0.76
PNKP-226ENST00000636840 ZNF784Q8NCA9 323 aaPredicted RBP10.28□□□□□ -0.76
PNKP-226ENST00000636840 BICC1Q9H694 974 aaKnown RBP10.28□□□□□ -0.76
PNKP-226ENST00000636840 PODXL2Q9NZ53 605 aa10.28□□□□□ -0.76
PNKP-226ENST00000636840 MINPP1Q9UNW1 487 aa10.28□□□□□ -0.76
PNKP-226ENST00000636840 LEMD3Q9Y2U8 911 aa10.28□□□□□ -0.76
PNKP-226ENST00000636840 XDHP47989 1333 aa10.28□□□□□ -0.76
PNKP-226ENST00000636840 GNAI2P04899 355 aa10.27□□□□□ -0.77
PNKP-226ENST00000636840 GPSM2P81274 684 aa10.27□□□□□ -0.77
PNKP-226ENST00000636840 RABL6Q3YEC7 729 aaPredicted RBP10.27□□□□□ -0.77
PNKP-226ENST00000636840 EPHA10Q5JZY3 1008 aa10.27□□□□□ -0.77
PNKP-226ENST00000636840 ITPRIPQ8IWB1 547 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms