RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 SH3TC2Q8TF17 1288 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 JDP2Q8WYK2 163 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 CNKSR1Q969H4 720 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 L3MBTL2Q969R5 705 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 XAGE2Q96GT9 111 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 RNPC3Q96LT9 517 aaKnown RBP2.37□□□□□ -2.03
GABRB3-220ENST00000636512 ZSCAN10Q96SZ4 725 aaPredicted RBP2.37□□□□□ -2.03
GABRB3-220ENST00000636512 ESYT1Q9BSJ8 1104 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 SRRTQ9BXP5 876 aaKnown RBP2.37□□□□□ -2.03
GABRB3-220ENST00000636512 CFHR5Q9BXR6 569 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 NIFKQ9BYG3 293 aaKnown RBP2.37□□□□□ -2.03
GABRB3-220ENST00000636512 BCO2Q9BYV7 579 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 OSBPL7Q9BZF2 842 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 PHACTR1Q9C0D0 580 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 CCDC113Q9H0I3 377 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 GGNBP2Q9H3C7 697 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 ARHGEF10LQ9HCE6 1279 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 TMPRSS4Q9NRS4 437 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 RAB6BQ9NRW1 208 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 TYW1Q9NV66 732 aaKnown RBP2.37□□□□□ -2.03
GABRB3-220ENST00000636512 SNTG2Q9NY99 539 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 ANKIB1Q9P2G1 1089 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 PRKAG3Q9UGI9 489 aa2.37□□□□□ -2.03
GABRB3-220ENST00000636512 FCF1Q9Y324 198 aaKnown RBP2.37□□□□□ -2.03
GABRB3-220ENST00000636512 SUPT16HQ9Y5B9 1047 aaKnown RBP2.37□□□□□ -2.03
GABRB3-220ENST00000636512 A6NHS1 94 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 UBAP1LF5GYI3 381 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 EML1O00423 815 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 PDPK1O15530 556 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 PRC1O43663 620 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 TLL1O43897 1013 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 TNFRSF21O75509 655 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 TRIM37O94972 964 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 STAU1O95793 577 aaKnown RBP2.36□□□□□ -2.03
GABRB3-220ENST00000636512 TATP17735 454 aaPredicted RBP2.36□□□□□ -2.03
GABRB3-220ENST00000636512 MCM4P33991 863 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 GYS2P54840 703 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 NR5A1Q13285 461 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 SERINC3Q13530 473 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 TCEA2Q15560 299 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 NBPF1Q3BBV0 1214 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 GNASQ5JWF2 1037 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 TTC39BQ5VTQ0 682 aaPredicted RBP2.36□□□□□ -2.03
GABRB3-220ENST00000636512 C1orf53Q5VUE5 145 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 WWC2Q6AWC2 1192 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 PDE12Q6L8Q7 609 aaKnown RBP2.36□□□□□ -2.03
GABRB3-220ENST00000636512 ADGRD1Q6QNK2 874 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 XKR5Q6UX68 686 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 C16orf86Q6ZW13 317 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 TICAM2Q86XR7 235 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 ZNF784Q8NCA9 323 aaPredicted RBP2.36□□□□□ -2.03
GABRB3-220ENST00000636512 RHPN1Q8TCX5 695 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 ZNF296Q8WUU4 475 aaPredicted RBP2.36□□□□□ -2.03
GABRB3-220ENST00000636512 HNRNPLLQ8WVV9 542 aaKnown RBP2.36□□□□□ -2.03
GABRB3-220ENST00000636512 NKD1Q969G9 470 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 AIDAQ96BJ3 306 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 TMEM74Q96NL1 305 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 TRERF1Q96PN7 1200 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 FERD3LQ96RJ6 166 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 DNAJC7Q99615 494 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 FEZ1Q99689 392 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 SPOCK3Q9BQ16 436 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 NT5C1AQ9BXI3 368 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 EHD4Q9H223 541 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 IL21Q9HBE4 155 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 ZFYVE28Q9HCC9 887 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 NPHS2Q9NP85 383 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 COPRSQ9NQ92 184 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 GINM1Q9NU53 330 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 SLC52A1Q9NWF4 448 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 WBP1LQ9NX94 342 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 AKAP2Q9Y2D5 859 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 PARP3Q9Y6F1 533 aa2.36□□□□□ -2.03
GABRB3-220ENST00000636512 ESYT3A0FGR9 886 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 MEN1O00255 615 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 KIF3BO15066 747 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 KLF4O43474 513 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 POTEIP0CG38 1075 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 HCLS1P14317 486 aaPredicted RBP2.35□□□□□ -2.03
GABRB3-220ENST00000636512 CPEP16870 476 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 CES1P23141 567 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 IRS1P35568 1242 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 GGCXP38435 758 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 SOX9P48436 509 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 ARSDP51689 593 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 EMP3P54852 163 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 FCGRTP55899 365 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 EIF6P56537 245 aaKnown RBP2.35□□□□□ -2.03
GABRB3-220ENST00000636512 AMPD3Q01432 767 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 CENPCQ03188 943 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 APOBRQ0VD83 1088 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 HDAC1Q13547 482 aaPredicted RBP2.35□□□□□ -2.03
GABRB3-220ENST00000636512 SAFB2Q14151 953 aaKnown RBP eCLIP2.35□□□□□ -2.03
GABRB3-220ENST00000636512 PPP2R5AQ15172 486 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 MAP3K11Q16584 847 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 FXNQ16595 210 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 MTERF2Q49AM1 385 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 SLC27A3Q5K4L6 730 aa2.35□□□□□ -2.03
GABRB3-220ENST00000636512 AXDND1Q5T1B0 1012 aaPredicted RBP2.35□□□□□ -2.03
GABRB3-220ENST00000636512 PPP1R26Q5T8A7 1209 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms