RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 POTEIP0CG38 1075 aa23.08■■□□□ 1.29
PNKP-225ENST00000636214 POTEJP0CG39 1038 aa23.08■■□□□ 1.29
PNKP-225ENST00000636214 TRIM28Q13263 835 aaKnown RBP23.08■■□□□ 1.29
PNKP-225ENST00000636214 AOC3Q16853 763 aa23.08■■□□□ 1.29
PNKP-225ENST00000636214 MYD88Q99836 296 aa23.08■■□□□ 1.29
PNKP-225ENST00000636214 IRS4O14654 1257 aaPredicted RBP23.07■■□□□ 1.28
PNKP-225ENST00000636214 TSR2Q969E8 191 aaKnown RBP23.07■■□□□ 1.28
PNKP-225ENST00000636214 DDX60Q8IY21 1712 aaKnown RBP23.06■■□□□ 1.28
PNKP-225ENST00000636214 SLC51AQ86UW1 340 aa23.06■■□□□ 1.28
PNKP-225ENST00000636214 WWC1Q8IX03 1113 aa23.06■■□□□ 1.28
PNKP-225ENST00000636214 SF3B3Q15393 1217 aaKnown RBP23.05■■□□□ 1.28
PNKP-225ENST00000636214 ZBTB38Q8NAP3 1195 aaPredicted RBP23.05■■□□□ 1.28
PNKP-225ENST00000636214 RTFDC1Q9BY42 306 aaPredicted RBP23.05■■□□□ 1.28
PNKP-225ENST00000636214 CREBZFQ9NS37 354 aa23.04■■□□□ 1.28
PNKP-225ENST00000636214 COL4A5P29400 1685 aa23.03■■□□□ 1.28
PNKP-225ENST00000636214 TAF1P21675 1872 aa23.03■■□□□ 1.28
PNKP-225ENST00000636214 TSPYL6Q8N831 410 aa23.03■■□□□ 1.28
PNKP-225ENST00000636214 JMYQ8N9B5 988 aa23.03■■□□□ 1.28
PNKP-225ENST00000636214 CCDC191Q8NCU4 936 aa23.03■■□□□ 1.28
PNKP-225ENST00000636214 CWC25Q9NXE8 425 aaPredicted RBP23.03■■□□□ 1.28
PNKP-225ENST00000636214 ZNRF3Q9ULT6 936 aa23.03■■□□□ 1.28
PNKP-225ENST00000636214 IL16Q14005 1332 aa23.03■■□□□ 1.28
PNKP-225ENST00000636214 KIAA2012Q0VF49 1180 aa23.02■■□□□ 1.28
PNKP-225ENST00000636214 NEXNQ0ZGT2 675 aa23.02■■□□□ 1.28
PNKP-225ENST00000636214 TWISTNBQ3B726 338 aaPredicted RBP23.02■■□□□ 1.28
PNKP-225ENST00000636214 NCBP3Q53F19 620 aaKnown RBP23.02■■□□□ 1.28
PNKP-225ENST00000636214 METTL22Q9BUU2 404 aaPredicted RBP23.02■■□□□ 1.28
PNKP-225ENST00000636214 MAP3K2Q9Y2U5 619 aa23.01■■□□□ 1.27
PNKP-225ENST00000636214 PCCAP05165 728 aaPredicted RBP23■■□□□ 1.27
PNKP-225ENST00000636214 KSR2Q6VAB6 950 aa23■■□□□ 1.27
PNKP-225ENST00000636214 CELF1Q92879 486 aaKnown RBP23■■□□□ 1.27
PNKP-225ENST00000636214 NSFL1CQ9UNZ2 370 aaKnown RBP23■■□□□ 1.27
PNKP-225ENST00000636214 SALL2Q9Y467 1007 aaPredicted RBP23■■□□□ 1.27
PNKP-225ENST00000636214 TNIP1Q15025 636 aa22.99■■□□□ 1.27
PNKP-225ENST00000636214 CCDC152Q4G0S7 254 aa22.99■■□□□ 1.27
PNKP-225ENST00000636214 CIAPIN1Q6FI81 312 aa22.99■■□□□ 1.27
PNKP-225ENST00000636214 C6orf229H3BNL8 230 aa22.98■■□□□ 1.27
PNKP-225ENST00000636214 EPS15P42566 896 aa22.98■■□□□ 1.27
PNKP-225ENST00000636214 SCNN1DP51172 638 aa22.98■■□□□ 1.27
PNKP-225ENST00000636214 RPS8P62241 208 aaKnown RBP22.98■■□□□ 1.27
PNKP-225ENST00000636214 CNTROBQ8N137 903 aa22.98■■□□□ 1.27
PNKP-225ENST00000636214 EYA3Q99504 573 aa22.98■■□□□ 1.27
PNKP-225ENST00000636214 BCL2L13Q9BXK5 485 aa22.98■■□□□ 1.27
PNKP-225ENST00000636214 LRRC37AA6NMS7 1700 aa22.98■■□□□ 1.27
PNKP-225ENST00000636214 PASKQ96RG2 1323 aa22.98■■□□□ 1.27
PNKP-225ENST00000636214 PI4KAP2A4QPH2 592 aa22.97■■□□□ 1.27
PNKP-225ENST00000636214 TMEM88BA6NKF7 163 aa22.97■■□□□ 1.27
PNKP-225ENST00000636214 PDE8AO60658 829 aa22.97■■□□□ 1.27
PNKP-225ENST00000636214 CXCL9Q07325 125 aa22.97■■□□□ 1.27
PNKP-225ENST00000636214 WASHC4Q2M389 1173 aa22.97■■□□□ 1.27
PNKP-225ENST00000636214 MAP1SQ66K74 1059 aaPredicted RBP22.97■■□□□ 1.27
PNKP-225ENST00000636214 USP50Q70EL3 339 aaPredicted RBP22.97■■□□□ 1.27
PNKP-225ENST00000636214 PI4KAP1Q8N8J0 262 aa22.97■■□□□ 1.27
PNKP-225ENST00000636214 ADAMTSL1Q8N6G6 1762 aa22.96■■□□□ 1.27
PNKP-225ENST00000636214 SLC4A2P04920 1241 aa22.96■■□□□ 1.27
PNKP-225ENST00000636214 WDR63Q8IWG1 891 aa22.96■■□□□ 1.27
PNKP-225ENST00000636214 MKRN1Q9UHC7 482 aaKnown RBP22.96■■□□□ 1.27
PNKP-225ENST00000636214 RAD17O75943 681 aa22.95■■□□□ 1.26
PNKP-225ENST00000636214 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.26
PNKP-225ENST00000636214 ADARB2Q9NS39 739 aaKnown RBP22.95■■□□□ 1.26
PNKP-225ENST00000636214 FANCIQ9NVI1 1328 aa22.95■■□□□ 1.26
PNKP-225ENST00000636214 CDHR2Q9BYE9 1310 aa22.94■■□□□ 1.26
PNKP-225ENST00000636214 ITGBL1O95965 494 aaPredicted RBP22.94■■□□□ 1.26
PNKP-225ENST00000636214 GMPSP49915 693 aaPredicted RBP22.94■■□□□ 1.26
PNKP-225ENST00000636214 GPRC5DQ9NZD1 345 aa22.94■■□□□ 1.26
PNKP-225ENST00000636214 ANKIB1Q9P2G1 1089 aa22.94■■□□□ 1.26
PNKP-225ENST00000636214 PCNTO95613 3336 aa22.94■■□□□ 1.26
PNKP-225ENST00000636214 CACNA1FO60840 1977 aa22.94■■□□□ 1.26
PNKP-225ENST00000636214 G3V3G9 751 aa22.93■■□□□ 1.26
PNKP-225ENST00000636214 GPSM2P81274 684 aa22.93■■□□□ 1.26
PNKP-225ENST00000636214 DCAF8Q5TAQ9 597 aa22.93■■□□□ 1.26
PNKP-225ENST00000636214 IFFO2Q5TF58 517 aa22.93■■□□□ 1.26
PNKP-225ENST00000636214 JARID2Q92833 1246 aaPredicted RBP22.93■■□□□ 1.26
PNKP-225ENST00000636214 CCDC85AQ96PX6 553 aaPredicted RBP22.93■■□□□ 1.26
PNKP-225ENST00000636214 SEC31BQ9NQW1 1179 aa22.93■■□□□ 1.26
PNKP-225ENST00000636214 LTBP1Q14766 1721 aa22.93■■□□□ 1.26
PNKP-225ENST00000636214 DUOX1Q9NRD9 1551 aa22.93■■□□□ 1.26
PNKP-225ENST00000636214 RIMBP2O15034 1052 aa22.92■■□□□ 1.26
PNKP-225ENST00000636214 FKBP5Q13451 457 aaPredicted RBP22.92■■□□□ 1.26
PNKP-225ENST00000636214 ANKRD18AQ8IVF6 992 aa22.92■■□□□ 1.26
PNKP-225ENST00000636214 FLIIQ13045 1269 aa22.91■■□□□ 1.26
PNKP-225ENST00000636214 CDC5LQ99459 802 aaKnown RBP22.91■■□□□ 1.26
PNKP-225ENST00000636214 ZC3H12CQ9C0D7 883 aaKnown RBP22.91■■□□□ 1.26
PNKP-225ENST00000636214 MYH16Q9H6N6 1097 aa22.91■■□□□ 1.26
PNKP-225ENST00000636214 DBNDD1Q9H9R9 158 aa22.91■■□□□ 1.26
PNKP-225ENST00000636214 CNTNAP1P78357 1384 aa22.9■■□□□ 1.26
PNKP-225ENST00000636214 UFL1O94874 794 aa22.9■■□□□ 1.26
PNKP-225ENST00000636214 IGKV5-2P06315 115 aa22.9■■□□□ 1.26
PNKP-225ENST00000636214 HSPA1AP0DMV8 641 aaKnown RBP22.9■■□□□ 1.26
PNKP-225ENST00000636214 HSPA1BP0DMV9 641 aaKnown RBP22.9■■□□□ 1.26
PNKP-225ENST00000636214 TBC1D16Q8TBP0 767 aa22.9■■□□□ 1.26
PNKP-225ENST00000636214 POLLQ9UGP5 575 aa22.9■■□□□ 1.26
PNKP-225ENST00000636214 GGA1Q9UJY5 639 aa22.9■■□□□ 1.26
PNKP-225ENST00000636214 ABT1Q9ULW3 272 aaKnown RBP22.9■■□□□ 1.26
PNKP-225ENST00000636214 MYH3P11055 1940 aa22.9■■□□□ 1.26
PNKP-225ENST00000636214 NEURL1BA8MQ27 555 aa22.89■■□□□ 1.25
PNKP-225ENST00000636214 H7C1D1 291 aa22.89■■□□□ 1.25
PNKP-225ENST00000636214 ECE2O60344 883 aa22.89■■□□□ 1.25
PNKP-225ENST00000636214 CTSWP56202 376 aa22.89■■□□□ 1.25
PNKP-225ENST00000636214 CWF19L2Q2TBE0 894 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms