RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 C8orf58Q8NAV2 365 aa9.5□□□□□ -0.89
CACNA1A-222ENST00000636022 ZNF428Q96B54 188 aa9.5□□□□□ -0.89
CACNA1A-222ENST00000636022 FAM89AQ96GI7 184 aa9.5□□□□□ -0.89
CACNA1A-222ENST00000636022 VPS33BQ9H267 617 aa9.5□□□□□ -0.89
CACNA1A-222ENST00000636022 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
CACNA1A-222ENST00000636022 LRRC37AA6NMS7 1700 aa9.49□□□□□ -0.89
CACNA1A-222ENST00000636022 ATP5J2-PTCD1G3V325 749 aa9.49□□□□□ -0.89
CACNA1A-222ENST00000636022 ELL2O00472 640 aaPredicted RBP9.49□□□□□ -0.89
CACNA1A-222ENST00000636022 EIF6P56537 245 aaKnown RBP9.49□□□□□ -0.89
CACNA1A-222ENST00000636022 GRAPQ13588 217 aa9.49□□□□□ -0.89
CACNA1A-222ENST00000636022 SF3B3Q15393 1217 aaKnown RBP9.49□□□□□ -0.89
CACNA1A-222ENST00000636022 DDX46Q7L014 1031 aaKnown RBP9.49□□□□□ -0.89
CACNA1A-222ENST00000636022 PNMA8AQ86V59 439 aaPredicted RBP9.49□□□□□ -0.89
CACNA1A-222ENST00000636022 GRAPLQ8TC17 118 aaPredicted RBP9.49□□□□□ -0.89
CACNA1A-222ENST00000636022 PHAXQ9H814 394 aaKnown RBP9.49□□□□□ -0.89
CACNA1A-222ENST00000636022 COL4A1P02462 1669 aa9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 PPIP5K2O43314 1243 aa9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 SCNN1DP51172 638 aa9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 AOC3Q16853 763 aa9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 CCDC27Q2M243 656 aa9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 EAPPQ56P03 285 aaPredicted RBP9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 DPP8Q6V1X1 898 aaPredicted RBP9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 NIM1KQ8IY84 436 aa9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 MPNDQ8N594 471 aa9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 TMX4Q9H1E5 349 aaPredicted RBP9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 ZNRF3Q9ULT6 936 aa9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 GJA3Q9Y6H8 435 aa9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 DUOX1Q9NRD9 1551 aa9.48□□□□□ -0.89
CACNA1A-222ENST00000636022 EPS15P42566 896 aa9.47□□□□□ -0.89
CACNA1A-222ENST00000636022 CXCL9Q07325 125 aa9.47□□□□□ -0.89
CACNA1A-222ENST00000636022 GOLGA2Q08379 1002 aa9.47□□□□□ -0.89
CACNA1A-222ENST00000636022 KIAA2012Q0VF49 1180 aa9.47□□□□□ -0.89
CACNA1A-222ENST00000636022 MAP1SQ66K74 1059 aaPredicted RBP9.47□□□□□ -0.89
CACNA1A-222ENST00000636022 TMC4Q7Z404 712 aa9.47□□□□□ -0.89
CACNA1A-222ENST00000636022 RIC3Q7Z5B4 369 aa9.47□□□□□ -0.89
CACNA1A-222ENST00000636022 TSPYL6Q8N831 410 aa9.47□□□□□ -0.89
CACNA1A-222ENST00000636022 SUPT20HQ8NEM7 779 aa9.47□□□□□ -0.89
CACNA1A-222ENST00000636022 CELF1Q92879 486 aaKnown RBP9.47□□□□□ -0.89
CACNA1A-222ENST00000636022 IRS4O14654 1257 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-222ENST00000636022 ZEB1P37275 1124 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-222ENST00000636022 RTL5Q5HYW3 569 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-222ENST00000636022 WWC1Q8IX03 1113 aa9.46□□□□□ -0.9
CACNA1A-222ENST00000636022 CNTROBQ8N137 903 aa9.46□□□□□ -0.9
CACNA1A-222ENST00000636022 ZBTB38Q8NAP3 1195 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-222ENST00000636022 TSR2Q969E8 191 aaKnown RBP9.46□□□□□ -0.9
CACNA1A-222ENST00000636022 CLEC11AQ9Y240 323 aa9.46□□□□□ -0.9
CACNA1A-222ENST00000636022 CNTNAP1P78357 1384 aa9.46□□□□□ -0.9
CACNA1A-222ENST00000636022 TMEM88BA6NKF7 163 aa9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 YDJCA8MPS7 323 aa9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 LMOD1P29536 600 aaPredicted RBP9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 COL13A1Q5TAT6 717 aaPredicted RBP9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 CCDC30Q5VVM6 783 aa9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 USP50Q70EL3 339 aaPredicted RBP9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 CCDC191Q8NCU4 936 aa9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 MYD88Q99836 296 aa9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 METTL22Q9BUU2 404 aaPredicted RBP9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 CHMP4AQ9BY43 222 aa9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 GPRC5DQ9NZD1 345 aa9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 MKRN1Q9UHC7 482 aaKnown RBP9.45□□□□□ -0.9
CACNA1A-222ENST00000636022 ZNF316A6NFI3 1004 aaPredicted RBP9.44□□□□□ -0.9
CACNA1A-222ENST00000636022 PCCAP05165 728 aaPredicted RBP9.44□□□□□ -0.9
CACNA1A-222ENST00000636022 HSPA1AP0DMV8 641 aaKnown RBP9.44□□□□□ -0.9
CACNA1A-222ENST00000636022 HSPA1BP0DMV9 641 aaKnown RBP9.44□□□□□ -0.9
CACNA1A-222ENST00000636022 GMPSP49915 693 aaPredicted RBP9.44□□□□□ -0.9
CACNA1A-222ENST00000636022 RPS8P62241 208 aaKnown RBP9.44□□□□□ -0.9
CACNA1A-222ENST00000636022 GPSM2P81274 684 aa9.44□□□□□ -0.9
CACNA1A-222ENST00000636022 CWC25Q9NXE8 425 aaPredicted RBP9.44□□□□□ -0.9
CACNA1A-222ENST00000636022 POLLQ9UGP5 575 aa9.44□□□□□ -0.9
CACNA1A-222ENST00000636022 IL16Q14005 1332 aa9.44□□□□□ -0.9
CACNA1A-222ENST00000636022 CACNA1FO60840 1977 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 TRPM7Q96QT4 1865 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 CDHR2Q9BYE9 1310 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 PI4KAP2A4QPH2 592 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 RAD17O75943 681 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 DDX58O95786 925 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 IGKV5-2P06315 115 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 VEGFBP49765 207 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 TNIP1Q15025 636 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 WASHC4Q2M389 1173 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 CIAPIN1Q6FI81 312 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 KSR2Q6VAB6 950 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 PI4KAP1Q8N8J0 262 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 MRS2Q9HD23 443 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 SEC31BQ9NQW1 1179 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 ADARB2Q9NS39 739 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 PGAP2Q9UHJ9 254 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 NSFL1CQ9UNZ2 370 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 MAP3K2Q9Y2U5 619 aa9.43□□□□□ -0.9
CACNA1A-222ENST00000636022 RASSF10A6NK89 507 aa9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 PDE8AO60658 829 aa9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 ABCB7O75027 752 aa9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 HSP90B1P14625 803 aaKnown RBP9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 HIRAP54198 1017 aaPredicted RBP9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 FMR1Q06787 632 aaKnown RBP eCLIP9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 TWISTNBQ3B726 338 aaPredicted RBP9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 CST9Q5W186 159 aa9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 G2E3Q7L622 706 aa9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 TBC1D16Q8TBP0 767 aa9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 JARID2Q92833 1246 aaPredicted RBP9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms