RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 NYAP1Q6ZVC0 841 aa17.42■□□□□ 0.38
CACNA1A-220ENST00000635988 FSD1Q9BTV5 496 aa17.42■□□□□ 0.38
CACNA1A-220ENST00000635988 KCND1Q9NSA2 647 aa17.42■□□□□ 0.38
CACNA1A-220ENST00000635988 PIK3C2AO00443 1686 aa17.42■□□□□ 0.38
CACNA1A-220ENST00000635988 MED1Q15648 1581 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-220ENST00000635988 H3BQV1 296 aa17.42■□□□□ 0.38
CACNA1A-220ENST00000635988 IFFO2Q5TF58 517 aa17.42■□□□□ 0.38
CACNA1A-220ENST00000635988 KRT222Q8N1A0 295 aa17.42■□□□□ 0.38
CACNA1A-220ENST00000635988 GTF3C6Q969F1 213 aa17.42■□□□□ 0.38
CACNA1A-220ENST00000635988 FAM193AP78312 1265 aa17.41■□□□□ 0.38
CACNA1A-220ENST00000635988 SLFNL1Q499Z3 407 aa17.41■□□□□ 0.38
CACNA1A-220ENST00000635988 ZNF592Q92610 1267 aa17.41■□□□□ 0.38
CACNA1A-220ENST00000635988 ERO1AQ96HE7 468 aa17.41■□□□□ 0.38
CACNA1A-220ENST00000635988 SKILP12757 684 aa17.41■□□□□ 0.38
CACNA1A-220ENST00000635988 DIP2AQ14689 1571 aa17.41■□□□□ 0.38
CACNA1A-220ENST00000635988 A0A0D9SFI3 127 aa17.4■□□□□ 0.38
CACNA1A-220ENST00000635988 BECN2A8MW95 431 aa17.4■□□□□ 0.38
CACNA1A-220ENST00000635988 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-220ENST00000635988 USPL1Q5W0Q7 1092 aa17.4■□□□□ 0.38
CACNA1A-220ENST00000635988 ATL3Q6DD88 541 aa17.4■□□□□ 0.38
CACNA1A-220ENST00000635988 KSR2Q6VAB6 950 aa17.4■□□□□ 0.38
CACNA1A-220ENST00000635988 BRF1Q92994 677 aa17.4■□□□□ 0.38
CACNA1A-220ENST00000635988 GSDMDP57764 484 aa17.39■□□□□ 0.37
CACNA1A-220ENST00000635988 STK3Q13188 491 aa17.39■□□□□ 0.37
CACNA1A-220ENST00000635988 EAF2Q96CJ1 260 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-220ENST00000635988 TCEANC2Q96MN5 208 aa17.39■□□□□ 0.37
CACNA1A-220ENST00000635988 ANO10Q9NW15 660 aa17.39■□□□□ 0.37
CACNA1A-220ENST00000635988 MAP3K2Q9Y2U5 619 aa17.39■□□□□ 0.37
CACNA1A-220ENST00000635988 UBR1Q8IWV7 1749 aa17.39■□□□□ 0.37
CACNA1A-220ENST00000635988 SLFN14P0C7P3 912 aa17.39■□□□□ 0.37
CACNA1A-220ENST00000635988 LLPHQ9BRT6 129 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-220ENST00000635988 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 SASH1O94885 1247 aa17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 DHX8Q14562 1220 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 CREBRFQ8IUR6 639 aa17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 NEK1Q96PY6 1258 aa17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 RCOR1Q9UKL0 485 aa17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 TEFQ10587 303 aa17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 NAA30Q147X3 362 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 CCDC73Q6ZRK6 1079 aa17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 LTV1Q96GA3 475 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 NAT10Q9H0A0 1025 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 ZNF215Q9UL58 517 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-220ENST00000635988 SLIT1O75093 1534 aa17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 UTYO14607 1347 aa17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 CCDC69A6NI79 296 aa17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 IGSF3O75054 1194 aa17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 TAF5LO75529 589 aa17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 NAA16Q6N069 864 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 CCDC66A2RUB6 948 aa17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 SLU7O95391 586 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 TERF2Q15554 542 aa17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 C11orf57Q6ZUT1 292 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 CCAR2Q8N163 923 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 LINS1Q8NG48 757 aa17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 CCDC8Q9H0W5 538 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 BOLA2Q9H3K6 86 aa17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 FAM53CQ9NYF3 392 aa17.37■□□□□ 0.37
CACNA1A-220ENST00000635988 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 GRM8O00222 908 aa17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 JAK2O60674 1132 aa17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 KINO60870 393 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 TUBB4AP04350 444 aa17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 FAM69CQ0P6D2 419 aa17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 COL9A3Q14050 684 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 KMT5BQ4FZB7 885 aa17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 NUTM2GQ5VZR2 741 aa17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 CCAR1Q8IX12 1150 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 IMPACTQ9P2X3 320 aa17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 CCZ1BP86790 482 aa17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 CCZ1P86791 482 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 ZNF396Q96N95 335 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-220ENST00000635988 ANXA1P04083 346 aa17.35■□□□□ 0.37
CACNA1A-220ENST00000635988 SMARCC2Q8TAQ2 1214 aa17.35■□□□□ 0.37
CACNA1A-220ENST00000635988 LGR6Q9HBX8 967 aa17.35■□□□□ 0.37
CACNA1A-220ENST00000635988 RFX7Q2KHR2 1363 aa17.35■□□□□ 0.37
CACNA1A-220ENST00000635988 USP27XA6NNY8 438 aa17.35■□□□□ 0.37
CACNA1A-220ENST00000635988 HSP90B1P14625 803 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-220ENST00000635988 AMOTL2Q9Y2J4 779 aa17.35■□□□□ 0.37
CACNA1A-220ENST00000635988 TAF6LQ9Y6J9 622 aa17.35■□□□□ 0.37
CACNA1A-220ENST00000635988 ANKARQ7Z5J8 1434 aa17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 DDX58O95786 925 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 FAM160A1Q05DH4 1040 aa17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 AKAP4Q5JQC9 854 aa17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 FILIP1Q7Z7B0 1213 aa17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 ZNF589Q86UQ0 364 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 OSBPL5Q9H0X9 879 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 HMGB1P09429 215 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 Q6ZUG5 572 aa17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 DHX40Q8IX18 779 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 CHMP4CQ96CF2 233 aa17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 SUCLG2Q96I99 432 aa17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 USP16Q9Y5T5 823 aa17.34■□□□□ 0.37
CACNA1A-220ENST00000635988 ADD1P35611 737 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-220ENST00000635988 ARID5BQ14865 1188 aa17.33■□□□□ 0.36
CACNA1A-220ENST00000635988 USHBP1Q8N6Y0 703 aa17.33■□□□□ 0.36
CACNA1A-220ENST00000635988 BICC1Q9H694 974 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms