RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 PLA2G12BQ9BX93 195 aa24.58■■□□□ 1.53
CLN8-208ENST00000635751 LNPKQ9C0E8 428 aa24.58■■□□□ 1.53
CLN8-208ENST00000635751 SRGAP3O43295 1099 aa24.58■■□□□ 1.53
CLN8-208ENST00000635751 MTX1Q13505 466 aa24.58■■□□□ 1.53
CLN8-208ENST00000635751 LMBR1LQ6UX01 489 aa24.58■■□□□ 1.53
CLN8-208ENST00000635751 DDR1Q08345 913 aa24.57■■□□□ 1.52
CLN8-208ENST00000635751 RABL6Q3YEC7 729 aaPredicted RBP24.57■■□□□ 1.52
CLN8-208ENST00000635751 HMMRO75330 724 aa24.56■■□□□ 1.52
CLN8-208ENST00000635751 SERPINB2P05120 415 aa24.56■■□□□ 1.52
CLN8-208ENST00000635751 CCDC24Q8N4L8 307 aa24.56■■□□□ 1.52
CLN8-208ENST00000635751 POLRMTO00411 1230 aaKnown RBP24.56■■□□□ 1.52
CLN8-208ENST00000635751 NPHP1O15259 732 aa24.56■■□□□ 1.52
CLN8-208ENST00000635751 PDE8AO60658 829 aa24.56■■□□□ 1.52
CLN8-208ENST00000635751 SSH3Q8TE77 659 aa24.56■■□□□ 1.52
CLN8-208ENST00000635751 POLA2Q14181 598 aa24.55■■□□□ 1.52
CLN8-208ENST00000635751 NFKBIBQ15653 356 aa24.55■■□□□ 1.52
CLN8-208ENST00000635751 ANKRD45Q5TZF3 282 aa24.55■■□□□ 1.52
CLN8-208ENST00000635751 CHMP3Q9Y3E7 222 aa24.55■■□□□ 1.52
CLN8-208ENST00000635751 R3HDM1Q15032 1099 aaKnown RBP24.54■■□□□ 1.52
CLN8-208ENST00000635751 CNBD1Q8NA66 436 aa24.54■■□□□ 1.52
CLN8-208ENST00000635751 CCDC85AQ96PX6 553 aaPredicted RBP24.54■■□□□ 1.52
CLN8-208ENST00000635751 ABCC12Q96J65 1359 aa24.53■■□□□ 1.52
CLN8-208ENST00000635751 CSF1RP07333 972 aa24.53■■□□□ 1.52
CLN8-208ENST00000635751 MMP10P09238 476 aa24.53■■□□□ 1.52
CLN8-208ENST00000635751 CTSWP56202 376 aa24.53■■□□□ 1.52
CLN8-208ENST00000635751 SLC10A5Q5PT55 438 aa24.53■■□□□ 1.52
CLN8-208ENST00000635751 HSP90B1P14625 803 aaKnown RBP24.52■■□□□ 1.52
CLN8-208ENST00000635751 BMP2KLQ5H9B9 411 aa24.52■■□□□ 1.52
CLN8-208ENST00000635751 PRR5LQ6MZQ0 368 aa24.52■■□□□ 1.52
CLN8-208ENST00000635751 TTLL11Q8NHH1 800 aa24.52■■□□□ 1.52
CLN8-208ENST00000635751 C22orf23Q9BZE7 217 aa24.52■■□□□ 1.52
CLN8-208ENST00000635751 NRXN2Q9P2S2 1712 aa24.52■■□□□ 1.52
CLN8-208ENST00000635751 MFAP1P55081 439 aaKnown RBP24.51■■□□□ 1.51
CLN8-208ENST00000635751 DCTPP1Q9H773 170 aa24.51■■□□□ 1.51
CLN8-208ENST00000635751 SLC16A10Q8TF71 515 aa24.51■■□□□ 1.51
CLN8-208ENST00000635751 PARP3Q9Y6F1 533 aa24.51■■□□□ 1.51
CLN8-208ENST00000635751 KLHDC4Q8TBB5 520 aa24.49■■□□□ 1.51
CLN8-208ENST00000635751 PA2G4Q9UQ80 394 aaKnown RBP24.49■■□□□ 1.51
CLN8-208ENST00000635751 TAF1P21675 1872 aa24.49■■□□□ 1.51
CLN8-208ENST00000635751 RFX5P48382 616 aaPredicted RBP24.49■■□□□ 1.51
CLN8-208ENST00000635751 C3orf67Q6ZVT6 689 aa24.49■■□□□ 1.51
CLN8-208ENST00000635751 GREM2Q9H772 168 aa24.49■■□□□ 1.51
CLN8-208ENST00000635751 EXOC6BQ9Y2D4 811 aa24.49■■□□□ 1.51
CLN8-208ENST00000635751 TNRC6CQ9HCJ0 1690 aaKnown RBP24.48■■□□□ 1.51
CLN8-208ENST00000635751 PSDA5PKW4 1024 aaPredicted RBP24.48■■□□□ 1.51
CLN8-208ENST00000635751 ST5P78524 1137 aa24.48■■□□□ 1.51
CLN8-208ENST00000635751 SURF6O75683 361 aaKnown RBP24.47■■□□□ 1.51
CLN8-208ENST00000635751 CCDC57Q2TAC2 916 aa24.47■■□□□ 1.51
CLN8-208ENST00000635751 NLRP3Q96P20 1036 aa24.47■■□□□ 1.51
CLN8-208ENST00000635751 ANKRD31Q8N7Z5 1873 aa24.47■■□□□ 1.51
CLN8-208ENST00000635751 ZBTB7AO95365 584 aa24.46■■□□□ 1.51
CLN8-208ENST00000635751 PTPN12Q05209 780 aaKnown RBP24.46■■□□□ 1.51
CLN8-208ENST00000635751 TBC1D2Q9BYX2 928 aa24.46■■□□□ 1.51
CLN8-208ENST00000635751 APBB1O00213 710 aa24.45■■□□□ 1.5
CLN8-208ENST00000635751 ITGA6P23229 1130 aa24.45■■□□□ 1.5
CLN8-208ENST00000635751 IFIT5Q13325 482 aaKnown RBP24.45■■□□□ 1.5
CLN8-208ENST00000635751 SF3B3Q15393 1217 aaKnown RBP24.45■■□□□ 1.5
CLN8-208ENST00000635751 CCDC152Q4G0S7 254 aa24.45■■□□□ 1.5
CLN8-208ENST00000635751 ZNF594Q96JF6 807 aaPredicted RBP24.45■■□□□ 1.5
CLN8-208ENST00000635751 SPEF2Q9C093 1822 aa24.45■■□□□ 1.5
CLN8-208ENST00000635751 SIL1Q9H173 461 aa24.45■■□□□ 1.5
CLN8-208ENST00000635751 COPRSQ9NQ92 184 aa24.45■■□□□ 1.5
CLN8-208ENST00000635751 ANKRD18BA2A2Z9 1011 aa24.43■■□□□ 1.5
CLN8-208ENST00000635751 SEC31BQ9NQW1 1179 aa24.43■■□□□ 1.5
CLN8-208ENST00000635751 ATF5Q9Y2D1 282 aaPredicted RBP24.42■■□□□ 1.5
CLN8-208ENST00000635751 RIC1Q4ADV7 1423 aa24.42■■□□□ 1.5
CLN8-208ENST00000635751 RBM25P49756 843 aaKnown RBP24.41■■□□□ 1.5
CLN8-208ENST00000635751 G3BP1Q13283 466 aaKnown RBP eCLIP24.41■■□□□ 1.5
CLN8-208ENST00000635751 OS9Q13438 667 aaPredicted RBP24.41■■□□□ 1.5
CLN8-208ENST00000635751 TAF7LQ5H9L4 462 aa24.41■■□□□ 1.5
CLN8-208ENST00000635751 MTFR1LQ9H019 292 aa24.41■■□□□ 1.5
CLN8-208ENST00000635751 RTL9Q8NET4 1388 aa24.4■■□□□ 1.5
CLN8-208ENST00000635751 HSP90AB4PQ58FF6 505 aa24.4■■□□□ 1.5
CLN8-208ENST00000635751 BCL11AQ9H165 835 aa24.4■■□□□ 1.5
CLN8-208ENST00000635751 SMARCA5O60264 1052 aaPredicted RBP24.39■■□□□ 1.49
CLN8-208ENST00000635751 RAB11FIP3O75154 756 aa24.39■■□□□ 1.49
CLN8-208ENST00000635751 BRIP1Q9BX63 1249 aa24.39■■□□□ 1.49
CLN8-208ENST00000635751 PUS3Q9BZE2 481 aaKnown RBP24.39■■□□□ 1.49
CLN8-208ENST00000635751 COL4A1P02462 1669 aa24.39■■□□□ 1.49
CLN8-208ENST00000635751 LRRC24Q50LG9 513 aa24.38■■□□□ 1.49
CLN8-208ENST00000635751 ANTXR1Q9H6X2 564 aa24.38■■□□□ 1.49
CLN8-208ENST00000635751 LRRCC1Q9C099 1032 aa24.38■■□□□ 1.49
CLN8-208ENST00000635751 SLKQ9H2G2 1235 aaPredicted RBP24.38■■□□□ 1.49
CLN8-208ENST00000635751 EYA2O00167 538 aa24.37■■□□□ 1.49
CLN8-208ENST00000635751 FRAT2O75474 233 aaPredicted RBP24.37■■□□□ 1.49
CLN8-208ENST00000635751 RHPN1Q8TCX5 695 aa24.37■■□□□ 1.49
CLN8-208ENST00000635751 KLRG2A4D1S0 409 aaPredicted RBP24.36■■□□□ 1.49
CLN8-208ENST00000635751 SASH1O94885 1247 aa24.36■■□□□ 1.49
CLN8-208ENST00000635751 CRY2Q49AN0 593 aa24.36■■□□□ 1.49
CLN8-208ENST00000635751 LDHAL6AQ6ZMR3 332 aa24.36■■□□□ 1.49
CLN8-208ENST00000635751 ATG9AQ7Z3C6 839 aa24.36■■□□□ 1.49
CLN8-208ENST00000635751 PLEKHM2Q8IWE5 1019 aa24.36■■□□□ 1.49
CLN8-208ENST00000635751 DDX46Q7L014 1031 aaKnown RBP24.35■■□□□ 1.49
CLN8-208ENST00000635751 KIF1BPQ96EK5 621 aa24.35■■□□□ 1.49
CLN8-208ENST00000635751 CDC5LQ99459 802 aaKnown RBP24.35■■□□□ 1.49
CLN8-208ENST00000635751 EIF5BO60841 1220 aaKnown RBP24.35■■□□□ 1.49
CLN8-208ENST00000635751 CDC45O75419 566 aa24.35■■□□□ 1.49
CLN8-208ENST00000635751 PDE6BP35913 854 aa24.35■■□□□ 1.49
CLN8-208ENST00000635751 TBC1D9Q6ZT07 1266 aa24.35■■□□□ 1.49
CLN8-208ENST00000635751 ERC1Q8IUD2 1116 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms