RNA–Protein interactions for RNA: ENST00000629343.2

TCF4-267, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-267ENST00000629343 RPS8P62241 208 aaKnown RBP12.49□□□□□ -0.41
TCF4-267ENST00000629343 RPGRQ92834 1020 aaKnown RBP12.49□□□□□ -0.41
TCF4-267ENST00000629343 GRIN3BO60391 1043 aa12.48□□□□□ -0.41
TCF4-267ENST00000629343 CTSWP56202 376 aa12.48□□□□□ -0.41
TCF4-267ENST00000629343 PDE3AQ14432 1141 aa12.48□□□□□ -0.41
TCF4-267ENST00000629343 RABL6Q3YEC7 729 aaPredicted RBP12.48□□□□□ -0.41
TCF4-267ENST00000629343 CCDC152Q4G0S7 254 aa12.48□□□□□ -0.41
TCF4-267ENST00000629343 C20orf194Q5TEA3 1177 aa12.48□□□□□ -0.41
TCF4-267ENST00000629343 PRPF40BQ6NWY9 871 aaKnown RBP12.48□□□□□ -0.41
TCF4-267ENST00000629343 LMBR1LQ6UX01 489 aa12.48□□□□□ -0.41
TCF4-267ENST00000629343 DDX46Q7L014 1031 aaKnown RBP12.48□□□□□ -0.41
TCF4-267ENST00000629343 ANKRD44Q8N8A2 993 aa12.48□□□□□ -0.41
TCF4-267ENST00000629343 CELF1Q92879 486 aaKnown RBP12.48□□□□□ -0.41
TCF4-267ENST00000629343 MEIS3Q99687 375 aa12.48□□□□□ -0.41
TCF4-267ENST00000629343 GREM2Q9H772 168 aa12.48□□□□□ -0.41
TCF4-267ENST00000629343 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
TCF4-267ENST00000629343 C21orf2O43822 256 aa12.47□□□□□ -0.41
TCF4-267ENST00000629343 MS4A1P11836 297 aa12.47□□□□□ -0.41
TCF4-267ENST00000629343 GRAPQ13588 217 aa12.47□□□□□ -0.41
TCF4-267ENST00000629343 OLFM4Q6UX06 510 aa12.47□□□□□ -0.41
TCF4-267ENST00000629343 SP8Q8IXZ3 490 aa12.47□□□□□ -0.41
TCF4-267ENST00000629343 GRAPLQ8TC17 118 aaPredicted RBP12.47□□□□□ -0.41
TCF4-267ENST00000629343 CCDC85AQ96PX6 553 aaPredicted RBP12.47□□□□□ -0.41
TCF4-267ENST00000629343 ARFGEF2Q9Y6D5 1785 aa12.47□□□□□ -0.41
TCF4-267ENST00000629343 SLC51AQ86UW1 340 aa12.46□□□□□ -0.41
TCF4-267ENST00000629343 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.41
TCF4-267ENST00000629343 ATP6V0A2Q9Y487 856 aa12.46□□□□□ -0.41
TCF4-267ENST00000629343 ANKRD31Q8N7Z5 1873 aa12.46□□□□□ -0.42
TCF4-267ENST00000629343 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
TCF4-267ENST00000629343 GNAI3P08754 354 aa12.45□□□□□ -0.42
TCF4-267ENST00000629343 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
TCF4-267ENST00000629343 PPP4R3CPQ6ZMV5 832 aa12.45□□□□□ -0.42
TCF4-267ENST00000629343 ARHGAP27Q6ZUM4 889 aa12.45□□□□□ -0.42
TCF4-267ENST00000629343 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.45□□□□□ -0.42
TCF4-267ENST00000629343 BICC1Q9H694 974 aaKnown RBP12.45□□□□□ -0.42
TCF4-267ENST00000629343 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
TCF4-267ENST00000629343 KIAA1551Q9HCM1 1747 aa12.45□□□□□ -0.42
TCF4-267ENST00000629343 UBTFL1P0CB47 393 aaPredicted RBP12.44□□□□□ -0.42
TCF4-267ENST00000629343 ITGA6P23229 1130 aa12.44□□□□□ -0.42
TCF4-267ENST00000629343 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
TCF4-267ENST00000629343 RFX5P48382 616 aaPredicted RBP12.44□□□□□ -0.42
TCF4-267ENST00000629343 PRELPP51888 382 aa12.44□□□□□ -0.42
TCF4-267ENST00000629343 FTSJ3Q8IY81 847 aaKnown RBP12.44□□□□□ -0.42
TCF4-267ENST00000629343 HDAC5Q9UQL6 1122 aa12.44□□□□□ -0.42
TCF4-267ENST00000629343 COG6Q9Y2V7 657 aa12.44□□□□□ -0.42
TCF4-267ENST00000629343 LRRFIP2Q9Y608 721 aaKnown RBP12.44□□□□□ -0.42
TCF4-267ENST00000629343 ANKRD36CQ5JPF3 1778 aa12.43□□□□□ -0.42
TCF4-267ENST00000629343 DCAF8L1A6NGE4 600 aa12.43□□□□□ -0.42
TCF4-267ENST00000629343 RRP1P56182 461 aaKnown RBP12.43□□□□□ -0.42
TCF4-267ENST00000629343 IFIT5Q13325 482 aaKnown RBP12.43□□□□□ -0.42
TCF4-267ENST00000629343 MVPQ14764 893 aaKnown RBP12.43□□□□□ -0.42
TCF4-267ENST00000629343 FAM161AQ3B820 660 aa12.43□□□□□ -0.42
TCF4-267ENST00000629343 TMC4Q7Z404 712 aa12.43□□□□□ -0.42
TCF4-267ENST00000629343 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
TCF4-267ENST00000629343 RTKN2Q8IZC4 609 aa12.43□□□□□ -0.42
TCF4-267ENST00000629343 ZBTB40Q9NUA8 1239 aa12.43□□□□□ -0.42
TCF4-267ENST00000629343 BSDC1Q9NW68 430 aaPredicted RBP12.43□□□□□ -0.42
TCF4-267ENST00000629343 SUPT16HQ9Y5B9 1047 aaKnown RBP12.43□□□□□ -0.42
TCF4-267ENST00000629343 ANKRD18BA2A2Z9 1011 aa12.42□□□□□ -0.42
TCF4-267ENST00000629343 NFKBIEO00221 500 aa12.42□□□□□ -0.42
TCF4-267ENST00000629343 PPEF1O14829 653 aaPredicted RBP12.42□□□□□ -0.42
TCF4-267ENST00000629343 GNAI2P04899 355 aa12.42□□□□□ -0.42
TCF4-267ENST00000629343 ATP8B2P98198 1209 aa12.42□□□□□ -0.42
TCF4-267ENST00000629343 MTX1Q13505 466 aa12.42□□□□□ -0.42
TCF4-267ENST00000629343 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
TCF4-267ENST00000629343 SOGA3Q5TF21 947 aa12.42□□□□□ -0.42
TCF4-267ENST00000629343 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
TCF4-267ENST00000629343 ZNF594Q96JF6 807 aaPredicted RBP12.42□□□□□ -0.42
TCF4-267ENST00000629343 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
TCF4-267ENST00000629343 MINPP1Q9UNW1 487 aa12.42□□□□□ -0.42
TCF4-267ENST00000629343 N4BP2Q86UW6 1770 aaPredicted RBP12.42□□□□□ -0.42
TCF4-267ENST00000629343 CCDC57Q2TAC2 916 aa12.41□□□□□ -0.42
TCF4-267ENST00000629343 RTFDC1Q9BY42 306 aaPredicted RBP12.41□□□□□ -0.42
TCF4-267ENST00000629343 RIPOR2Q9Y4F9 1068 aa12.41□□□□□ -0.42
TCF4-267ENST00000629343 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
TCF4-267ENST00000629343 TNRC6CQ9HCJ0 1690 aaKnown RBP12.41□□□□□ -0.42
TCF4-267ENST00000629343 SNED1Q8TER0 1413 aa12.4□□□□□ -0.42
TCF4-267ENST00000629343 WTIPA6NIX2 430 aaPredicted RBP12.4□□□□□ -0.42
TCF4-267ENST00000629343 GPSM2P81274 684 aa12.4□□□□□ -0.42
TCF4-267ENST00000629343 PTPN12Q05209 780 aaKnown RBP12.4□□□□□ -0.42
TCF4-267ENST00000629343 CCDC93Q567U6 631 aa12.4□□□□□ -0.42
TCF4-267ENST00000629343 MPNDQ8N594 471 aa12.4□□□□□ -0.42
TCF4-267ENST00000629343 PSMD1Q99460 953 aa12.4□□□□□ -0.42
TCF4-267ENST00000629343 PUS3Q9BZE2 481 aaKnown RBP12.4□□□□□ -0.42
TCF4-267ENST00000629343 PODXL2Q9NZ53 605 aa12.4□□□□□ -0.42
TCF4-267ENST00000629343 POLLQ9UGP5 575 aa12.4□□□□□ -0.42
TCF4-267ENST00000629343 DDX19BQ9UMR2 479 aa12.4□□□□□ -0.42
TCF4-267ENST00000629343 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
TCF4-267ENST00000629343 LTBP3Q9NS15 1303 aa12.39□□□□□ -0.43
TCF4-267ENST00000629343 IGHMBP2P38935 993 aaKnown RBP12.39□□□□□ -0.43
TCF4-267ENST00000629343 FKBP4Q02790 459 aaKnown RBP eCLIP12.39□□□□□ -0.43
TCF4-267ENST00000629343 LDHAL6AQ6ZMR3 332 aa12.39□□□□□ -0.43
TCF4-267ENST00000629343 KLHDC4Q8TBB5 520 aa12.39□□□□□ -0.43
TCF4-267ENST00000629343 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
TCF4-267ENST00000629343 COPRSQ9NQ92 184 aa12.39□□□□□ -0.43
TCF4-267ENST00000629343 NSFL1CQ9UNZ2 370 aaKnown RBP12.39□□□□□ -0.43
TCF4-267ENST00000629343 DDX60Q8IY21 1712 aaKnown RBP12.39□□□□□ -0.43
TCF4-267ENST00000629343 COL4A1P02462 1669 aa12.38□□□□□ -0.43
TCF4-267ENST00000629343 PNMA6EA0A0J9YXQ4 647 aa12.38□□□□□ -0.43
TCF4-267ENST00000629343 POLA2Q14181 598 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms