RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 ZNF646O15015 1829 aaPredicted RBP14.24□□□□□ -0.13
DDX41-219ENST00000629036 PCCAP05165 728 aaPredicted RBP14.23□□□□□ -0.13
DDX41-219ENST00000629036 GTF2E1P29083 439 aaPredicted RBP14.23□□□□□ -0.13
DDX41-219ENST00000629036 ZBTB38Q8NAP3 1195 aaPredicted RBP14.23□□□□□ -0.13
DDX41-219ENST00000629036 SSH1Q8WYL5 1049 aa14.23□□□□□ -0.13
DDX41-219ENST00000629036 CDHR2Q9BYE9 1310 aa14.22□□□□□ -0.13
DDX41-219ENST00000629036 F6X3S4 739 aa14.22□□□□□ -0.13
DDX41-219ENST00000629036 FKBP5Q13451 457 aaPredicted RBP14.22□□□□□ -0.13
DDX41-219ENST00000629036 SF3B3Q15393 1217 aaKnown RBP14.22□□□□□ -0.13
DDX41-219ENST00000629036 DNAAF4Q8WXU2 420 aa14.22□□□□□ -0.13
DDX41-219ENST00000629036 CWC25Q9NXE8 425 aaPredicted RBP14.22□□□□□ -0.13
DDX41-219ENST00000629036 PSME4Q14997 1843 aa14.22□□□□□ -0.13
DDX41-219ENST00000629036 ZBED9Q6R2W3 1325 aa14.21□□□□□ -0.13
DDX41-219ENST00000629036 IRS4O14654 1257 aaPredicted RBP14.21□□□□□ -0.13
DDX41-219ENST00000629036 BEND3Q5T5X7 828 aa14.21□□□□□ -0.13
DDX41-219ENST00000629036 JARID2Q92833 1246 aaPredicted RBP14.21□□□□□ -0.13
DDX41-219ENST00000629036 NLRP3Q96P20 1036 aa14.21□□□□□ -0.13
DDX41-219ENST00000629036 H7C1W4 665 aa14.2□□□□□ -0.14
DDX41-219ENST00000629036 HNRNPUQ00839 825 aaKnown RBP eCLIP14.2□□□□□ -0.14
DDX41-219ENST00000629036 GCKRQ14397 625 aa14.2□□□□□ -0.14
DDX41-219ENST00000629036 RTL5Q5HYW3 569 aaPredicted RBP14.2□□□□□ -0.14
DDX41-219ENST00000629036 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
DDX41-219ENST00000629036 SCN9AQ15858 1988 aa14.2□□□□□ -0.14
DDX41-219ENST00000629036 CT47B1P0C2W7 299 aaPredicted RBP14.19□□□□□ -0.14
DDX41-219ENST00000629036 ALDH1B1P30837 517 aa14.19□□□□□ -0.14
DDX41-219ENST00000629036 BRPF1P55201 1214 aaPredicted RBP14.19□□□□□ -0.14
DDX41-219ENST00000629036 ALDH1L2Q3SY69 923 aa14.19□□□□□ -0.14
DDX41-219ENST00000629036 CCDC93Q567U6 631 aa14.19□□□□□ -0.14
DDX41-219ENST00000629036 LINS1Q8NG48 757 aa14.19□□□□□ -0.14
DDX41-219ENST00000629036 RPGRQ92834 1020 aaKnown RBP14.19□□□□□ -0.14
DDX41-219ENST00000629036 RTL9Q8NET4 1388 aa14.19□□□□□ -0.14
DDX41-219ENST00000629036 PPEF1O14829 653 aaPredicted RBP14.18□□□□□ -0.14
DDX41-219ENST00000629036 LMNB1P20700 586 aa14.18□□□□□ -0.14
DDX41-219ENST00000629036 RBM17Q96I25 401 aaKnown RBP14.18□□□□□ -0.14
DDX41-219ENST00000629036 BCL2L13Q9BXK5 485 aa14.18□□□□□ -0.14
DDX41-219ENST00000629036 MKRN1Q9UHC7 482 aaKnown RBP14.18□□□□□ -0.14
DDX41-219ENST00000629036 ZC3H4Q9UPT8 1303 aaKnown RBP14.17□□□□□ -0.14
DDX41-219ENST00000629036 VEGFAP15692 232 aaPredicted RBP14.17□□□□□ -0.14
DDX41-219ENST00000629036 FKBP4Q02790 459 aaKnown RBP eCLIP14.17□□□□□ -0.14
DDX41-219ENST00000629036 GRAPQ13588 217 aa14.17□□□□□ -0.14
DDX41-219ENST00000629036 SOGA3Q5TF21 947 aa14.17□□□□□ -0.14
DDX41-219ENST00000629036 GRAPLQ8TC17 118 aaPredicted RBP14.17□□□□□ -0.14
DDX41-219ENST00000629036 CELF1Q92879 486 aaKnown RBP14.17□□□□□ -0.14
DDX41-219ENST00000629036 PLA2G12BQ9BX93 195 aa14.17□□□□□ -0.14
DDX41-219ENST00000629036 TAOK3Q9H2K8 898 aa14.17□□□□□ -0.14
DDX41-219ENST00000629036 ATP6V0A2Q9Y487 856 aa14.17□□□□□ -0.14
DDX41-219ENST00000629036 PTPRCP08575 1304 aa14.16□□□□□ -0.14
DDX41-219ENST00000629036 SCN4AP35499 1836 aa14.16□□□□□ -0.14
DDX41-219ENST00000629036 FOXN1O15353 648 aa14.16□□□□□ -0.14
DDX41-219ENST00000629036 PDE8AO60658 829 aa14.16□□□□□ -0.14
DDX41-219ENST00000629036 RARSP54136 660 aaKnown RBP14.16□□□□□ -0.14
DDX41-219ENST00000629036 NEXNQ0ZGT2 675 aa14.16□□□□□ -0.14
DDX41-219ENST00000629036 UBE3BQ7Z3V4 1068 aa14.16□□□□□ -0.14
DDX41-219ENST00000629036 PSMD1Q99460 953 aa14.16□□□□□ -0.14
DDX41-219ENST00000629036 SEC31BQ9NQW1 1179 aa14.16□□□□□ -0.14
DDX41-219ENST00000629036 ADAMTSL1Q8N6G6 1762 aa14.16□□□□□ -0.14
DDX41-219ENST00000629036 CTSWP56202 376 aa14.15□□□□□ -0.14
DDX41-219ENST00000629036 TTLL11Q8NHH1 800 aa14.15□□□□□ -0.14
DDX41-219ENST00000629036 RTFDC1Q9BY42 306 aaPredicted RBP14.15□□□□□ -0.14
DDX41-219ENST00000629036 UTYO14607 1347 aa14.15□□□□□ -0.15
DDX41-219ENST00000629036 BBOX1O75936 387 aa14.14□□□□□ -0.15
DDX41-219ENST00000629036 FAM161AQ3B820 660 aa14.14□□□□□ -0.15
DDX41-219ENST00000629036 CC2D2BQ6DHV5 1058 aa14.14□□□□□ -0.15
DDX41-219ENST00000629036 DDX46Q7L014 1031 aaKnown RBP14.14□□□□□ -0.15
DDX41-219ENST00000629036 RTKN2Q8IZC4 609 aa14.14□□□□□ -0.15
DDX41-219ENST00000629036 KAZALD1Q96I82 304 aa14.14□□□□□ -0.15
DDX41-219ENST00000629036 ZNF277Q9NRM2 450 aaPredicted RBP14.14□□□□□ -0.15
DDX41-219ENST00000629036 GLTPD2A6NH11 291 aa14.13□□□□□ -0.15
DDX41-219ENST00000629036 ALDH1L1O75891 902 aa14.13□□□□□ -0.15
DDX41-219ENST00000629036 CSF1RP07333 972 aa14.13□□□□□ -0.15
DDX41-219ENST00000629036 FOXO4P98177 505 aa14.13□□□□□ -0.15
DDX41-219ENST00000629036 EPHA10Q5JZY3 1008 aa14.13□□□□□ -0.15
DDX41-219ENST00000629036 SP8Q8IXZ3 490 aa14.13□□□□□ -0.15
DDX41-219ENST00000629036 GREM2Q9H772 168 aa14.13□□□□□ -0.15
DDX41-219ENST00000629036 SMC4Q9NTJ3 1288 aa14.13□□□□□ -0.15
DDX41-219ENST00000629036 GRM8O00222 908 aa14.12□□□□□ -0.15
DDX41-219ENST00000629036 POTECB2RU33 542 aa14.11□□□□□ -0.15
DDX41-219ENST00000629036 IARSP41252 1262 aaKnown RBP14.11□□□□□ -0.15
DDX41-219ENST00000629036 CCDC152Q4G0S7 254 aa14.11□□□□□ -0.15
DDX41-219ENST00000629036 TMC4Q7Z404 712 aa14.11□□□□□ -0.15
DDX41-219ENST00000629036 CCDC85AQ96PX6 553 aaPredicted RBP14.11□□□□□ -0.15
DDX41-219ENST00000629036 ZNF541Q9H0D2 1346 aa14.11□□□□□ -0.15
DDX41-219ENST00000629036 FZD9O00144 591 aa14.1□□□□□ -0.15
DDX41-219ENST00000629036 NBPF7P0C2Y1 421 aaPredicted RBP14.1□□□□□ -0.15
DDX41-219ENST00000629036 RPS8P62241 208 aaKnown RBP14.1□□□□□ -0.15
DDX41-219ENST00000629036 GRIPAP1Q4V328 841 aa14.1□□□□□ -0.15
DDX41-219ENST00000629036 SRCIN1Q9C0H9 1055 aa14.1□□□□□ -0.15
DDX41-219ENST00000629036 NOB1Q9ULX3 412 aaKnown RBP14.1□□□□□ -0.15
DDX41-219ENST00000629036 TNNQ9UQP3 1299 aa14.1□□□□□ -0.15
DDX41-219ENST00000629036 BCAR3O75815 825 aa14.09□□□□□ -0.15
DDX41-219ENST00000629036 HSP90B1P14625 803 aaKnown RBP14.09□□□□□ -0.15
DDX41-219ENST00000629036 GPSM2P81274 684 aa14.09□□□□□ -0.15
DDX41-219ENST00000629036 SLC4A10Q6U841 1118 aa14.09□□□□□ -0.15
DDX41-219ENST00000629036 AIDAQ96BJ3 306 aa14.09□□□□□ -0.15
DDX41-219ENST00000629036 SUCLG2Q96I99 432 aa14.09□□□□□ -0.15
DDX41-219ENST00000629036 USP44Q9H0E7 712 aa14.09□□□□□ -0.15
DDX41-219ENST00000629036 PRDM10Q9NQV6 1147 aa14.09□□□□□ -0.15
DDX41-219ENST00000629036 ANKRD44Q8N8A2 993 aa14.08□□□□□ -0.16
DDX41-219ENST00000629036 CREBZFQ9NS37 354 aa14.08□□□□□ -0.16
DDX41-219ENST00000629036 PODXL2Q9NZ53 605 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms