RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 CTNNA2P26232 953 aa14.71□□□□□ -0.05
SCN8A-209ENST00000627620 CCDC97Q96F63 343 aaPredicted RBP14.71□□□□□ -0.05
SCN8A-209ENST00000627620 GRM8O00222 908 aa14.71□□□□□ -0.06
SCN8A-209ENST00000627620 ALDH1L1O75891 902 aa14.71□□□□□ -0.06
SCN8A-209ENST00000627620 RBM25P49756 843 aaKnown RBP14.71□□□□□ -0.06
SCN8A-209ENST00000627620 LMBR1LQ6UX01 489 aa14.71□□□□□ -0.06
SCN8A-209ENST00000627620 IQSEC3Q9UPP2 1182 aaPredicted RBP14.71□□□□□ -0.06
SCN8A-209ENST00000627620 ATP6V1AP38606 617 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 HOOK3Q86VS8 718 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 KDM5BQ9UGL1 1544 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 PRC1O43663 620 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
SCN8A-209ENST00000627620 SYKP43405 635 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 ESR2Q92731 530 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 TCEANC2Q96MN5 208 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 RBM8AQ9Y5S9 174 aaKnown RBP14.7□□□□□ -0.06
SCN8A-209ENST00000627620 MYO1BO43795 1136 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 RRP9O43818 475 aaKnown RBP14.7□□□□□ -0.06
SCN8A-209ENST00000627620 IFIT1BQ5T764 474 aaKnown RBP14.7□□□□□ -0.06
SCN8A-209ENST00000627620 KSR2Q6VAB6 950 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 ANKRD44Q8N8A2 993 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 C8orf58Q8NAV2 365 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 MCMDC2Q4G0Z9 681 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 AKAP4Q5JQC9 854 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 ACSBG1Q96GR2 724 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 SETDB2Q96T68 719 aa14.7□□□□□ -0.06
SCN8A-209ENST00000627620 CAVIN2O95810 425 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 ATP8B2P98198 1209 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 MRPL50Q8N5N7 158 aaKnown RBP14.69□□□□□ -0.06
SCN8A-209ENST00000627620 FERMT2Q96AC1 680 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 TRIM47Q96LD4 638 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 ALG1Q9BT22 464 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 EXOC1Q9NV70 894 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 PPIP5K1Q6PFW1 1433 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 MSH6P52701 1360 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 NOP2P46087 812 aaKnown RBP14.69□□□□□ -0.06
SCN8A-209ENST00000627620 KLHL40Q2TBA0 621 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 TMTC2Q8N394 836 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 NAA15Q9BXJ9 866 aaKnown RBP14.69□□□□□ -0.06
SCN8A-209ENST00000627620 CNNM2Q9H8M5 875 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 BCCIPQ9P287 314 aaKnown RBP eCLIP14.69□□□□□ -0.06
SCN8A-209ENST00000627620 TBCAO75347 108 aaKnown RBP14.69□□□□□ -0.06
SCN8A-209ENST00000627620 ESYT1Q9BSJ8 1104 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 IL15P40933 162 aaPredicted RBP14.69□□□□□ -0.06
SCN8A-209ENST00000627620 HLTFQ14527 1009 aaKnown RBP eCLIP14.69□□□□□ -0.06
SCN8A-209ENST00000627620 CGNQ9P2M7 1197 aaKnown RBP14.69□□□□□ -0.06
SCN8A-209ENST00000627620 PCDHB15Q9Y5E8 787 aa14.69□□□□□ -0.06
SCN8A-209ENST00000627620 GCOM1H8Y6P7 765 aaPredicted RBP14.68□□□□□ -0.06
SCN8A-209ENST00000627620 N4BP3O15049 544 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 MYZAPP0CAP1 466 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 PRPF4BQ13523 1007 aaKnown RBP14.68□□□□□ -0.06
SCN8A-209ENST00000627620 GIMAP6Q6P9H5 292 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 RMND1Q9NWS8 449 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 GOLGA6L9A6NEM1 432 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 RTN1Q16799 776 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 UVSSAQ2YD98 709 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 SNW1Q13573 536 aaKnown RBP14.68□□□□□ -0.06
SCN8A-209ENST00000627620 SPECC1Q5M775 1068 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 ZGPATQ8N5A5 531 aaKnown RBP14.68□□□□□ -0.06
SCN8A-209ENST00000627620 TAOK3Q9H2K8 898 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 ZSCAN23Q3MJ62 389 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 SLC9C2Q5TAH2 1124 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 RRAGBQ5VZM2 374 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 NLRP3Q96P20 1036 aa14.68□□□□□ -0.06
SCN8A-209ENST00000627620 EIF4A2Q14240 407 aaKnown RBP14.67□□□□□ -0.06
SCN8A-209ENST00000627620 ERMNQ8TAM6 284 aa14.67□□□□□ -0.06
SCN8A-209ENST00000627620 HCLS1P14317 486 aaPredicted RBP14.67□□□□□ -0.06
SCN8A-209ENST00000627620 AFMP43652 599 aa14.67□□□□□ -0.06
SCN8A-209ENST00000627620 CBX1P83916 185 aa14.67□□□□□ -0.06
SCN8A-209ENST00000627620 NAA16Q6N069 864 aaPredicted RBP14.67□□□□□ -0.06
SCN8A-209ENST00000627620 Q6ZUG5 572 aa14.67□□□□□ -0.06
SCN8A-209ENST00000627620 PUF60Q9UHX1 559 aaKnown RBP14.67□□□□□ -0.06
SCN8A-209ENST00000627620 F8W031 263 aaPredicted RBP14.67□□□□□ -0.06
SCN8A-209ENST00000627620 POTEB2H3BUK9 544 aa14.67□□□□□ -0.06
SCN8A-209ENST00000627620 BMP15O95972 392 aa14.67□□□□□ -0.06
SCN8A-209ENST00000627620 NPHP3Q7Z494 1330 aa14.67□□□□□ -0.06
SCN8A-209ENST00000627620 INCENPQ9NQS7 918 aa14.67□□□□□ -0.06
SCN8A-209ENST00000627620 ASXL1Q8IXJ9 1541 aa14.66□□□□□ -0.06
SCN8A-209ENST00000627620 HEATR3Q7Z4Q2 680 aa14.66□□□□□ -0.06
SCN8A-209ENST00000627620 KCNG4Q8TDN1 519 aa14.66□□□□□ -0.06
SCN8A-209ENST00000627620 NIP7Q9Y221 180 aaKnown RBP eCLIP14.66□□□□□ -0.06
SCN8A-209ENST00000627620 CNPY2Q9Y2B0 182 aa14.66□□□□□ -0.06
SCN8A-209ENST00000627620 BICD1Q96G01 975 aa14.66□□□□□ -0.06
SCN8A-209ENST00000627620 MMRN2Q9H8L6 949 aa14.66□□□□□ -0.06
SCN8A-209ENST00000627620 STAT6P42226 847 aa14.66□□□□□ -0.06
SCN8A-209ENST00000627620 CCDC174Q6PII3 467 aa14.66□□□□□ -0.06
SCN8A-209ENST00000627620 JADE2Q9NQC1 790 aa14.66□□□□□ -0.06
SCN8A-209ENST00000627620 PA2G4Q9UQ80 394 aaKnown RBP14.66□□□□□ -0.06
SCN8A-209ENST00000627620 GOLGA6L10A0A0M3HER8 536 aa14.65□□□□□ -0.06
SCN8A-209ENST00000627620 POLR3GO15318 223 aaPredicted RBP14.65□□□□□ -0.06
SCN8A-209ENST00000627620 SMC1AQ14683 1233 aaKnown RBP14.65□□□□□ -0.06
SCN8A-209ENST00000627620 MTHFSDQ2M296 383 aaKnown RBP14.65□□□□□ -0.06
SCN8A-209ENST00000627620 AKR1B10O60218 316 aa14.65□□□□□ -0.06
SCN8A-209ENST00000627620 UTP14AQ9BVJ6 771 aaKnown RBP14.65□□□□□ -0.06
SCN8A-209ENST00000627620 GPATCH8Q9UKJ3 1502 aaKnown RBP14.65□□□□□ -0.06
SCN8A-209ENST00000627620 GNAQP50148 359 aa14.65□□□□□ -0.06
SCN8A-209ENST00000627620 UBASH3AP57075 661 aa14.65□□□□□ -0.06
SCN8A-209ENST00000627620 GNG11P61952 73 aa14.65□□□□□ -0.06
SCN8A-209ENST00000627620 NMIQ13287 307 aaPredicted RBP14.65□□□□□ -0.06
SCN8A-209ENST00000627620 PICALMQ13492 652 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms