RNA–Protein interactions for RNA: ENST00000627501.2

SOX2-OT-242, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 775 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-242ENST00000627501 SEC31BQ9NQW1 1179 aa17.71■□□□□ 0.43
SOX2-OT-242ENST00000627501 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
SOX2-OT-242ENST00000627501 CC2D2BQ6DHV5 1058 aa17.7■□□□□ 0.42
SOX2-OT-242ENST00000627501 KSR2Q6VAB6 950 aa17.7■□□□□ 0.42
SOX2-OT-242ENST00000627501 LARGE2Q8N3Y3 721 aa17.7■□□□□ 0.42
SOX2-OT-242ENST00000627501 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
SOX2-OT-242ENST00000627501 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
SOX2-OT-242ENST00000627501 ZNF521Q96K83 1311 aa17.7■□□□□ 0.42
SOX2-OT-242ENST00000627501 CWC25Q9NXE8 425 aaPredicted RBP17.69■□□□□ 0.42
SOX2-OT-242ENST00000627501 PPIP5K2O43314 1243 aa17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 BBOX1O75936 387 aa17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 DDX58O95786 925 aaKnown RBP17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 TAF1P21675 1872 aa17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 FSTL1Q12841 308 aa17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 FLIIQ13045 1269 aa17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 DPP8Q6V1X1 898 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 SP8Q8IXZ3 490 aa17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 CCDC191Q8NCU4 936 aa17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 SMC1BQ8NDV3 1235 aa17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 L3MBTL3Q96JM7 780 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 GPR101Q96P66 508 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 GJA3Q9Y6H8 435 aa17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 DICER1Q9UPY3 1922 aaKnown RBP17.68■□□□□ 0.42
SOX2-OT-242ENST00000627501 JDP2Q8WYK2 163 aa17.67■□□□□ 0.42
SOX2-OT-242ENST00000627501 TAF1DQ9H5J8 278 aaPredicted RBP17.67■□□□□ 0.42
SOX2-OT-242ENST00000627501 NEURL1BA8MQ27 555 aa17.66■□□□□ 0.42
SOX2-OT-242ENST00000627501 F6X3S4 739 aa17.66■□□□□ 0.42
SOX2-OT-242ENST00000627501 APLP1P51693 650 aa17.66■□□□□ 0.42
SOX2-OT-242ENST00000627501 GPSM2P81274 684 aa17.66■□□□□ 0.42
SOX2-OT-242ENST00000627501 MPNDQ8N594 471 aa17.66■□□□□ 0.42
SOX2-OT-242ENST00000627501 RTFDC1Q9BY42 306 aaPredicted RBP17.66■□□□□ 0.42
SOX2-OT-242ENST00000627501 FKBP5Q13451 457 aaPredicted RBP17.65■□□□□ 0.42
SOX2-OT-242ENST00000627501 NIM1KQ8IY84 436 aa17.65■□□□□ 0.42
SOX2-OT-242ENST00000627501 DNAJC5GQ8N7S2 189 aa17.65■□□□□ 0.42
SOX2-OT-242ENST00000627501 WTIPA6NIX2 430 aaPredicted RBP17.64■□□□□ 0.41
SOX2-OT-242ENST00000627501 SCNN1DP51172 638 aa17.64■□□□□ 0.41
SOX2-OT-242ENST00000627501 EAPPQ56P03 285 aaPredicted RBP17.64■□□□□ 0.41
SOX2-OT-242ENST00000627501 UBE3BQ7Z3V4 1068 aa17.64■□□□□ 0.41
SOX2-OT-242ENST00000627501 POLLQ9UGP5 575 aa17.64■□□□□ 0.41
SOX2-OT-242ENST00000627501 LTBP1Q14766 1721 aa17.64■□□□□ 0.41
SOX2-OT-242ENST00000627501 YDJCA8MPS7 323 aa17.63■□□□□ 0.41
SOX2-OT-242ENST00000627501 PDE8AO60658 829 aa17.63■□□□□ 0.41
SOX2-OT-242ENST00000627501 EPS15P42566 896 aa17.63■□□□□ 0.41
SOX2-OT-242ENST00000627501 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
SOX2-OT-242ENST00000627501 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
SOX2-OT-242ENST00000627501 GPC2Q8N158 579 aa17.63■□□□□ 0.41
SOX2-OT-242ENST00000627501 MYH16Q9H6N6 1097 aa17.63■□□□□ 0.41
SOX2-OT-242ENST00000627501 NSFL1CQ9UNZ2 370 aaKnown RBP17.63■□□□□ 0.41
SOX2-OT-242ENST00000627501 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 RAD17O75943 681 aa17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 EPHX2P34913 555 aa17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 CTSWP56202 376 aa17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 EIF6P56537 245 aaKnown RBP17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 CXCL9Q07325 125 aa17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 GRIPAP1Q4V328 841 aa17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 CHADLQ6NUI6 762 aa17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 CDCA7LQ96GN5 454 aa17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 TMX4Q9H1E5 349 aaPredicted RBP17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 HACL1Q9UJ83 578 aa17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 CDHR2Q9BYE9 1310 aa17.62■□□□□ 0.41
SOX2-OT-242ENST00000627501 SHTN1A0MZ66 631 aa17.61■□□□□ 0.41
SOX2-OT-242ENST00000627501 IQCA1LA6NCM1 817 aa17.61■□□□□ 0.41
SOX2-OT-242ENST00000627501 RIMBP2O15034 1052 aa17.61■□□□□ 0.41
SOX2-OT-242ENST00000627501 CASP7P55210 303 aa17.61■□□□□ 0.41
SOX2-OT-242ENST00000627501 NEXNQ0ZGT2 675 aa17.61■□□□□ 0.41
SOX2-OT-242ENST00000627501 GCKRQ14397 625 aa17.61■□□□□ 0.41
SOX2-OT-242ENST00000627501 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
SOX2-OT-242ENST00000627501 GREM2Q9H772 168 aa17.61■□□□□ 0.41
SOX2-OT-242ENST00000627501 H7C1W4 665 aa17.6■□□□□ 0.41
SOX2-OT-242ENST00000627501 CCDC152Q4G0S7 254 aa17.6■□□□□ 0.41
SOX2-OT-242ENST00000627501 SUPT20HQ8NEM7 779 aa17.6■□□□□ 0.41
SOX2-OT-242ENST00000627501 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
SOX2-OT-242ENST00000627501 DBNDD1Q9H9R9 158 aa17.6■□□□□ 0.41
SOX2-OT-242ENST00000627501 KCNQ5Q9NR82 932 aa17.6■□□□□ 0.41
SOX2-OT-242ENST00000627501 ZNRF3Q9ULT6 936 aa17.6■□□□□ 0.41
SOX2-OT-242ENST00000627501 C6orf229H3BNL8 230 aa17.59■□□□□ 0.41
SOX2-OT-242ENST00000627501 FMR1Q06787 632 aaKnown RBP eCLIP17.59■□□□□ 0.41
SOX2-OT-242ENST00000627501 DOK7Q18PE1 504 aa17.59■□□□□ 0.41
SOX2-OT-242ENST00000627501 MAP1SQ66K74 1059 aaPredicted RBP17.59■□□□□ 0.41
SOX2-OT-242ENST00000627501 LDHDQ86WU2 507 aa17.59■□□□□ 0.41
SOX2-OT-242ENST00000627501 TBC1D16Q8TBP0 767 aa17.59■□□□□ 0.41
SOX2-OT-242ENST00000627501 GMPSP49915 693 aaPredicted RBP17.58■□□□□ 0.4
SOX2-OT-242ENST00000627501 BEND3Q5T5X7 828 aa17.58■□□□□ 0.4
SOX2-OT-242ENST00000627501 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
SOX2-OT-242ENST00000627501 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
SOX2-OT-242ENST00000627501 WASHC4Q2M389 1173 aa17.57■□□□□ 0.4
SOX2-OT-242ENST00000627501 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
SOX2-OT-242ENST00000627501 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
SOX2-OT-242ENST00000627501 LINS1Q8NG48 757 aa17.57■□□□□ 0.4
SOX2-OT-242ENST00000627501 BCL2L13Q9BXK5 485 aa17.57■□□□□ 0.4
SOX2-OT-242ENST00000627501 ZBTB12Q9Y330 459 aaPredicted RBP17.57■□□□□ 0.4
SOX2-OT-242ENST00000627501 ADAMTSL1Q8N6G6 1762 aa17.57■□□□□ 0.4
SOX2-OT-242ENST00000627501 RTL9Q8NET4 1388 aa17.56■□□□□ 0.4
SOX2-OT-242ENST00000627501 PASKQ96RG2 1323 aa17.56■□□□□ 0.4
SOX2-OT-242ENST00000627501 UFL1O94874 794 aa17.56■□□□□ 0.4
SOX2-OT-242ENST00000627501 ITGBL1O95965 494 aaPredicted RBP17.56■□□□□ 0.4
SOX2-OT-242ENST00000627501 EPHA10Q5JZY3 1008 aa17.56■□□□□ 0.4
SOX2-OT-242ENST00000627501 ANKRD18AQ8IVF6 992 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms