RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 TRPC6Q9Y210 931 aa10.61□□□□□ -0.71
CHD2-211ENST00000627460 EXOC6BQ9Y2D4 811 aa10.61□□□□□ -0.71
CHD2-211ENST00000627460 TTC41PQ6P2S7 1318 aa10.6□□□□□ -0.71
CHD2-211ENST00000627460 ANKRD36CQ5JPF3 1778 aa10.6□□□□□ -0.71
CHD2-211ENST00000627460 ATP5J2-PTCD1G3V325 749 aa10.6□□□□□ -0.71
CHD2-211ENST00000627460 CDC45O75419 566 aa10.6□□□□□ -0.71
CHD2-211ENST00000627460 MX1P20591 662 aa10.6□□□□□ -0.71
CHD2-211ENST00000627460 PIP4K2AP48426 406 aaPredicted RBP10.6□□□□□ -0.71
CHD2-211ENST00000627460 SLC27A3Q5K4L6 730 aa10.6□□□□□ -0.71
CHD2-211ENST00000627460 TTC22Q5TAA0 569 aa10.6□□□□□ -0.71
CHD2-211ENST00000627460 KRT27Q7Z3Y8 459 aa10.6□□□□□ -0.71
CHD2-211ENST00000627460 STAP2Q9UGK3 403 aa10.6□□□□□ -0.71
CHD2-211ENST00000627460 COL5A3P25940 1745 aaPredicted RBP10.6□□□□□ -0.71
CHD2-211ENST00000627460 BTAF1O14981 1849 aa10.59□□□□□ -0.71
CHD2-211ENST00000627460 KCNQ2O43526 872 aa10.59□□□□□ -0.71
CHD2-211ENST00000627460 CASP7P55210 303 aa10.59□□□□□ -0.71
CHD2-211ENST00000627460 INTS5Q6P9B9 1019 aaKnown RBP10.59□□□□□ -0.71
CHD2-211ENST00000627460 APBB1O00213 710 aa10.58□□□□□ -0.72
CHD2-211ENST00000627460 RPS6KA4O75676 772 aa10.58□□□□□ -0.72
CHD2-211ENST00000627460 IFIT2P09913 472 aaKnown RBP10.58□□□□□ -0.72
CHD2-211ENST00000627460 PDE1AP54750 535 aa10.58□□□□□ -0.72
CHD2-211ENST00000627460 CCDC57Q2TAC2 916 aa10.58□□□□□ -0.72
CHD2-211ENST00000627460 IL27Q8NEV9 243 aa10.58□□□□□ -0.72
CHD2-211ENST00000627460 CCNL1Q9UK58 526 aaPredicted RBP10.58□□□□□ -0.72
CHD2-211ENST00000627460 SBF2Q86WG5 1849 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 PDE8AO60658 829 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 GLRX3O76003 335 aaKnown RBP10.57□□□□□ -0.72
CHD2-211ENST00000627460 CIAO1O76071 339 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 TIE1P35590 1138 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 IL15P40933 162 aaPredicted RBP10.57□□□□□ -0.72
CHD2-211ENST00000627460 ITPK1Q13572 414 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 LMBR1LQ6UX01 489 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 NLRP10Q86W26 655 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 SKAP1Q86WV1 359 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 TICAM2Q86XR7 235 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 ZNF34Q8IZ26 560 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 FBXO41Q8TF61 875 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 KAZALD1Q96I82 304 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 GPR108Q9NPR9 543 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 RTCBQ9Y3I0 505 aaKnown RBP10.57□□□□□ -0.72
CHD2-211ENST00000627460 LY75O60449 1722 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 SH3TC1Q8TE82 1336 aa10.57□□□□□ -0.72
CHD2-211ENST00000627460 USP42Q9H9J4 1324 aaKnown RBP10.57□□□□□ -0.72
CHD2-211ENST00000627460 EPB41L2O43491 1005 aaKnown RBP10.56□□□□□ -0.72
CHD2-211ENST00000627460 REC8O95072 547 aa10.56□□□□□ -0.72
CHD2-211ENST00000627460 RXRBP28702 533 aa10.56□□□□□ -0.72
CHD2-211ENST00000627460 IFIT5Q13325 482 aaKnown RBP10.56□□□□□ -0.72
CHD2-211ENST00000627460 TAF7LQ5H9L4 462 aa10.56□□□□□ -0.72
CHD2-211ENST00000627460 ILDR1Q86SU0 546 aaPredicted RBP10.56□□□□□ -0.72
CHD2-211ENST00000627460 ARHGEF1Q92888 912 aaKnown RBP10.56□□□□□ -0.72
CHD2-211ENST00000627460 UTP14AQ9BVJ6 771 aaKnown RBP10.56□□□□□ -0.72
CHD2-211ENST00000627460 NYXQ9GZU5 481 aa10.56□□□□□ -0.72
CHD2-211ENST00000627460 DAXXQ9UER7 740 aaPredicted RBP10.56□□□□□ -0.72
CHD2-211ENST00000627460 TRMT112Q9UI30 125 aaKnown RBP10.56□□□□□ -0.72
CHD2-211ENST00000627460 AKAP2Q9Y2D5 859 aa10.56□□□□□ -0.72
CHD2-211ENST00000627460 CHMP3Q9Y3E7 222 aa10.56□□□□□ -0.72
CHD2-211ENST00000627460 NUP98P52948 1817 aa10.56□□□□□ -0.72
CHD2-211ENST00000627460 SALL3Q9BXA9 1300 aa10.56□□□□□ -0.72
CHD2-211ENST00000627460 HIP1O00291 1037 aa10.55□□□□□ -0.72
CHD2-211ENST00000627460 SMARCA5O60264 1052 aaPredicted RBP10.55□□□□□ -0.72
CHD2-211ENST00000627460 ZPR1O75312 459 aa10.55□□□□□ -0.72
CHD2-211ENST00000627460 CAMTA2O94983 1202 aa10.55□□□□□ -0.72
CHD2-211ENST00000627460 FOXO4P98177 505 aa10.55□□□□□ -0.72
CHD2-211ENST00000627460 PTPN12Q05209 780 aaKnown RBP10.55□□□□□ -0.72
CHD2-211ENST00000627460 E2F4Q16254 413 aa10.55□□□□□ -0.72
CHD2-211ENST00000627460 CNTROBQ8N137 903 aa10.55□□□□□ -0.72
CHD2-211ENST00000627460 ECHDC1Q9NTX5 307 aa10.55□□□□□ -0.72
CHD2-211ENST00000627460 TBC1D2BQ9UPU7 963 aa10.55□□□□□ -0.72
CHD2-211ENST00000627460 BCORQ6W2J9 1755 aa10.54□□□□□ -0.72
CHD2-211ENST00000627460 ANKRD18BA2A2Z9 1011 aa10.54□□□□□ -0.72
CHD2-211ENST00000627460 IRS4O14654 1257 aaPredicted RBP10.54□□□□□ -0.72
CHD2-211ENST00000627460 CSF1RP07333 972 aa10.54□□□□□ -0.72
CHD2-211ENST00000627460 RFX5P48382 616 aaPredicted RBP10.54□□□□□ -0.72
CHD2-211ENST00000627460 LINC00116Q8NCU8 138 aa10.54□□□□□ -0.72
CHD2-211ENST00000627460 IL1RAPL2Q9NP60 686 aa10.54□□□□□ -0.72
CHD2-211ENST00000627460 NARFQ9UHQ1 456 aa10.54□□□□□ -0.72
CHD2-211ENST00000627460 TTLL13PA6NNM8 815 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 TRIM6-TRIM34B2RNG4 842 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 EYA2O00167 538 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 GNPATO15228 680 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 GSPT1P15170 499 aaKnown RBP10.53□□□□□ -0.72
CHD2-211ENST00000627460 SDSP20132 328 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 CTSWP56202 376 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
CHD2-211ENST00000627460 BECN1Q14457 450 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 MFSD10Q14728 455 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 HLFQ16534 295 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 CCDC152Q4G0S7 254 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 AACSQ86V21 672 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 RUFY2Q8WXA3 655 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 IPO9Q96P70 1041 aaKnown RBP10.53□□□□□ -0.72
CHD2-211ENST00000627460 CRISPLD2Q9H0B8 497 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 NIP7Q9Y221 180 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHD2-211ENST00000627460 SCN7AQ01118 1682 aa10.53□□□□□ -0.72
CHD2-211ENST00000627460 RTL9Q8NET4 1388 aa10.52□□□□□ -0.72
CHD2-211ENST00000627460 PLSCR1O15162 318 aa10.52□□□□□ -0.73
CHD2-211ENST00000627460 GPTP24298 496 aa10.52□□□□□ -0.73
CHD2-211ENST00000627460 SSFA2P28290 1259 aa10.52□□□□□ -0.73
CHD2-211ENST00000627460 RFC4P35249 363 aa10.52□□□□□ -0.73
CHD2-211ENST00000627460 LRRFIP1Q32MZ4 808 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms