RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, human

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM4-208	ENST00000626716	RASSF10	A6NK89	507 aa		32.85	■■■□□ 2.85
R3HDM4-208	ENST00000626716	FOXN1	O15353	648 aa		32.84	■■■□□ 2.85
R3HDM4-208	ENST00000626716	DUSP27	Q5VZP5	1158 aa		32.84	■■■□□ 2.85
R3HDM4-208	ENST00000626716	ZNF428	Q96B54	188 aa		32.84	■■■□□ 2.85
R3HDM4-208	ENST00000626716	ISCA1	Q9BUE6	129 aa		32.84	■■■□□ 2.85
R3HDM4-208	ENST00000626716	HYPK	Q9NX55	129 aa		32.84	■■■□□ 2.85
R3HDM4-208	ENST00000626716	GPRC5D	Q9NZD1	345 aa		32.84	■■■□□ 2.85
R3HDM4-208	ENST00000626716	TAF1	P21675	1872 aa		32.84	■■■□□ 2.85
R3HDM4-208	ENST00000626716	KIAA2012	Q0VF49	1180 aa		32.83	■■■□□ 2.85
R3HDM4-208	ENST00000626716	TMC4	Q7Z404	712 aa		32.83	■■■□□ 2.85
R3HDM4-208	ENST00000626716	AIDA	Q96BJ3	306 aa		32.82	■■■□□ 2.84
R3HDM4-208	ENST00000626716	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.82	■■■□□ 2.84
R3HDM4-208	ENST00000626716	ADARB2	Q9NS39	739 aa	Known RBP	32.82	■■■□□ 2.84
R3HDM4-208	ENST00000626716	ABT1	Q9ULW3	272 aa	Known RBP	32.82	■■■□□ 2.84
R3HDM4-208	ENST00000626716	MBIP	Q9NS73	344 aa		32.81	■■■□□ 2.84
R3HDM4-208	ENST00000626716	ATP5J2-PTCD1	G3V325	749 aa		32.8	■■■□□ 2.84
R3HDM4-208	ENST00000626716	CIAPIN1	Q6FI81	312 aa		32.8	■■■□□ 2.84
R3HDM4-208	ENST00000626716	FAM89A	Q96GI7	184 aa		32.8	■■■□□ 2.84
R3HDM4-208	ENST00000626716	WBP1L	Q9NX94	342 aa		32.79	■■■□□ 2.84
R3HDM4-208	ENST00000626716	ZNF853	P0CG23	659 aa		32.78	■■■□□ 2.84
R3HDM4-208	ENST00000626716	GMPS	P49915	693 aa	Predicted RBP	32.78	■■■□□ 2.84
R3HDM4-208	ENST00000626716	FMR1	Q06787	632 aa	Known RBP eCLIP	32.78	■■■□□ 2.84
R3HDM4-208	ENST00000626716	TNIP1	Q15025	636 aa		32.78	■■■□□ 2.84
R3HDM4-208	ENST00000626716	SF3B3	Q15393	1217 aa	Known RBP	32.78	■■■□□ 2.84
R3HDM4-208	ENST00000626716	WDR33	Q9C0J8	1336 aa	Known RBP	32.77	■■■□□ 2.84
R3HDM4-208	ENST00000626716	CTCF	P49711	727 aa	Predicted RBP	32.77	■■■□□ 2.84
R3HDM4-208	ENST00000626716	TRIM28	Q13263	835 aa	Known RBP	32.77	■■■□□ 2.84
R3HDM4-208	ENST00000626716	PRDM10	Q9NQV6	1147 aa		32.77	■■■□□ 2.84
R3HDM4-208	ENST00000626716	DDX60	Q8IY21	1712 aa	Known RBP	32.77	■■■□□ 2.84
R3HDM4-208	ENST00000626716	RAD17	O75943	681 aa		32.76	■■■□□ 2.83
R3HDM4-208	ENST00000626716	APAF1	O14727	1248 aa		32.75	■■■□□ 2.83
R3HDM4-208	ENST00000626716	BCL2L13	Q9BXK5	485 aa		32.75	■■■□□ 2.83
R3HDM4-208	ENST00000626716	TRPM7	Q96QT4	1865 aa		32.75	■■■□□ 2.83
R3HDM4-208	ENST00000626716	TRAF5	O00463	557 aa		32.74	■■■□□ 2.83
R3HDM4-208	ENST00000626716	CST9	Q5W186	159 aa		32.74	■■■□□ 2.83
R3HDM4-208	ENST00000626716	IFT57	Q9NWB7	429 aa		32.74	■■■□□ 2.83
R3HDM4-208	ENST00000626716	CALD1	Q05682	793 aa	Known RBP	32.73	■■■□□ 2.83
R3HDM4-208	ENST00000626716	RTL5	Q5HYW3	569 aa	Predicted RBP	32.73	■■■□□ 2.83
R3HDM4-208	ENST00000626716	RIC3	Q7Z5B4	369 aa		32.73	■■■□□ 2.83
R3HDM4-208	ENST00000626716	CELF1	Q92879	486 aa	Known RBP	32.73	■■■□□ 2.83
R3HDM4-208	ENST00000626716	CDHR2	Q9BYE9	1310 aa		32.73	■■■□□ 2.83
R3HDM4-208	ENST00000626716	GNAI1	P63096	354 aa		32.72	■■■□□ 2.83
R3HDM4-208	ENST00000626716	MAP2K1	Q02750	393 aa	Predicted RBP	32.72	■■■□□ 2.83
R3HDM4-208	ENST00000626716	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.72	■■■□□ 2.83
R3HDM4-208	ENST00000626716	YDJC	A8MPS7	323 aa		32.71	■■■□□ 2.83
R3HDM4-208	ENST00000626716	IRS4	O14654	1257 aa	Predicted RBP	32.71	■■■□□ 2.83
R3HDM4-208	ENST00000626716	WASHC4	Q2M389	1173 aa		32.71	■■■□□ 2.83
R3HDM4-208	ENST00000626716	PGAP2	Q9UHJ9	254 aa		32.71	■■■□□ 2.83
R3HDM4-208	ENST00000626716	ELL2	O00472	640 aa	Predicted RBP	32.7	■■■□□ 2.83
R3HDM4-208	ENST00000626716	GOLGA2	Q08379	1002 aa		32.7	■■■□□ 2.83
R3HDM4-208	ENST00000626716	LRRC37A	A6NMS7	1700 aa		32.7	■■■□□ 2.83
R3HDM4-208	ENST00000626716	ZC3H15	Q8WU90	426 aa	Known RBP	32.69	■■■□□ 2.82
R3HDM4-208	ENST00000626716	PHAX	Q9H814	394 aa	Known RBP	32.69	■■■□□ 2.82
R3HDM4-208	ENST00000626716	CNOT7	Q9UIV1	285 aa	Known RBP	32.69	■■■□□ 2.82
R3HDM4-208	ENST00000626716	DUOX1	Q9NRD9	1551 aa		32.68	■■■□□ 2.82
R3HDM4-208	ENST00000626716	ECE1	P42892	770 aa		32.68	■■■□□ 2.82
R3HDM4-208	ENST00000626716	CAPNS2	Q96L46	248 aa		32.68	■■■□□ 2.82
R3HDM4-208	ENST00000626716	TLL2	Q9Y6L7	1015 aa		32.68	■■■□□ 2.82
R3HDM4-208	ENST00000626716	LBX1	P52954	281 aa		32.67	■■■□□ 2.82
R3HDM4-208	ENST00000626716	HIRA	P54198	1017 aa	Predicted RBP	32.67	■■■□□ 2.82
R3HDM4-208	ENST00000626716	RPS8	P62241	208 aa	Known RBP	32.67	■■■□□ 2.82
R3HDM4-208	ENST00000626716	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.67	■■■□□ 2.82
R3HDM4-208	ENST00000626716	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.67	■■■□□ 2.82
R3HDM4-208	ENST00000626716	C6orf229	H3BNL8	230 aa		32.66	■■■□□ 2.82
R3HDM4-208	ENST00000626716		H7C1D1	291 aa		32.66	■■■□□ 2.82
R3HDM4-208	ENST00000626716	GPSM2	P81274	684 aa		32.66	■■■□□ 2.82
R3HDM4-208	ENST00000626716	POLL	Q9UGP5	575 aa		32.66	■■■□□ 2.82
R3HDM4-208	ENST00000626716	RIMBP2	O15034	1052 aa		32.65	■■■□□ 2.82
R3HDM4-208	ENST00000626716	HSP90B1	P14625	803 aa	Known RBP	32.65	■■■□□ 2.82
R3HDM4-208	ENST00000626716	CYP4F22	Q6NT55	531 aa		32.65	■■■□□ 2.82
R3HDM4-208	ENST00000626716	GLIS2	Q9BZE0	524 aa	Predicted RBP	32.65	■■■□□ 2.82
R3HDM4-208	ENST00000626716	C8orf58	Q8NAV2	365 aa		32.64	■■■□□ 2.82
R3HDM4-208	ENST00000626716	DPF2	Q92785	391 aa		32.64	■■■□□ 2.82
R3HDM4-208	ENST00000626716	GPR101	Q96P66	508 aa	Predicted RBP	32.64	■■■□□ 2.82
R3HDM4-208	ENST00000626716	CHMP4A	Q9BY43	222 aa		32.64	■■■□□ 2.82
R3HDM4-208	ENST00000626716	CELF2	O95319	508 aa	Known RBP	32.63	■■■□□ 2.81
R3HDM4-208	ENST00000626716	TRPM4	Q8TD43	1214 aa		32.63	■■■□□ 2.81
R3HDM4-208	ENST00000626716	EYA3	Q99504	573 aa		32.63	■■■□□ 2.81
R3HDM4-208	ENST00000626716	MYD88	Q99836	296 aa		32.63	■■■□□ 2.81
R3HDM4-208	ENST00000626716	DBNDD1	Q9H9R9	158 aa		32.63	■■■□□ 2.81
R3HDM4-208	ENST00000626716	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.63	■■■□□ 2.81
R3HDM4-208	ENST00000626716	PSMD14	O00487	310 aa		32.62	■■■□□ 2.81
R3HDM4-208	ENST00000626716	HSPA8	P11142	646 aa	Known RBP	32.62	■■■□□ 2.81
R3HDM4-208	ENST00000626716	GRM1	Q13255	1194 aa		32.62	■■■□□ 2.81
R3HDM4-208	ENST00000626716	CDC37L1	Q7L3B6	337 aa		32.62	■■■□□ 2.81
R3HDM4-208	ENST00000626716	MICALL2	Q8IY33	904 aa		32.62	■■■□□ 2.81
R3HDM4-208	ENST00000626716	CCDC191	Q8NCU4	936 aa		32.62	■■■□□ 2.81
R3HDM4-208	ENST00000626716	SHTN1	A0MZ66	631 aa		32.61	■■■□□ 2.81
R3HDM4-208	ENST00000626716	COL4A1	P02462	1669 aa		32.6	■■■□□ 2.81
R3HDM4-208	ENST00000626716	CCDC30	Q5VVM6	783 aa		32.6	■■■□□ 2.81
R3HDM4-208	ENST00000626716	SAPCD2	Q86UD0	394 aa		32.6	■■■□□ 2.81
R3HDM4-208	ENST00000626716	TBC1D16	Q8TBP0	767 aa		32.6	■■■□□ 2.81
R3HDM4-208	ENST00000626716	PCCA	P05165	728 aa	Predicted RBP	32.59	■■■□□ 2.81
R3HDM4-208	ENST00000626716	BEGAIN	Q9BUH8	593 aa		32.59	■■■□□ 2.81
R3HDM4-208	ENST00000626716	SEC31B	Q9NQW1	1179 aa		32.59	■■■□□ 2.81
R3HDM4-208	ENST00000626716	ECE2	O60344	883 aa		32.58	■■■□□ 2.81
R3HDM4-208	ENST00000626716	DDX58	O95786	925 aa	Known RBP	32.58	■■■□□ 2.81
R3HDM4-208	ENST00000626716	DOK7	Q18PE1	504 aa		32.58	■■■□□ 2.81
R3HDM4-208	ENST00000626716	METTL22	Q9BUU2	404 aa	Predicted RBP	32.58	■■■□□ 2.81
R3HDM4-208	ENST00000626716	CWC25	Q9NXE8	425 aa	Predicted RBP	32.58	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms