RNA–Protein interactions for RNA: ENST00000626619.2

SOX2-OT-239, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 660 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-239ENST00000626619 CC2D2BQ6DHV5 1058 aa17.7■□□□□ 0.42
SOX2-OT-239ENST00000626619 KSR2Q6VAB6 950 aa17.7■□□□□ 0.42
SOX2-OT-239ENST00000626619 LARGE2Q8N3Y3 721 aa17.7■□□□□ 0.42
SOX2-OT-239ENST00000626619 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
SOX2-OT-239ENST00000626619 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
SOX2-OT-239ENST00000626619 ZNF521Q96K83 1311 aa17.7■□□□□ 0.42
SOX2-OT-239ENST00000626619 CWC25Q9NXE8 425 aaPredicted RBP17.69■□□□□ 0.42
SOX2-OT-239ENST00000626619 PPIP5K2O43314 1243 aa17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 BBOX1O75936 387 aa17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 DDX58O95786 925 aaKnown RBP17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 TAF1P21675 1872 aa17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 FSTL1Q12841 308 aa17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 FLIIQ13045 1269 aa17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 DPP8Q6V1X1 898 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 SP8Q8IXZ3 490 aa17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 CCDC191Q8NCU4 936 aa17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 SMC1BQ8NDV3 1235 aa17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 L3MBTL3Q96JM7 780 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 GPR101Q96P66 508 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 GJA3Q9Y6H8 435 aa17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 DICER1Q9UPY3 1922 aaKnown RBP17.68■□□□□ 0.42
SOX2-OT-239ENST00000626619 JDP2Q8WYK2 163 aa17.67■□□□□ 0.42
SOX2-OT-239ENST00000626619 TAF1DQ9H5J8 278 aaPredicted RBP17.67■□□□□ 0.42
SOX2-OT-239ENST00000626619 NEURL1BA8MQ27 555 aa17.66■□□□□ 0.42
SOX2-OT-239ENST00000626619 F6X3S4 739 aa17.66■□□□□ 0.42
SOX2-OT-239ENST00000626619 APLP1P51693 650 aa17.66■□□□□ 0.42
SOX2-OT-239ENST00000626619 GPSM2P81274 684 aa17.66■□□□□ 0.42
SOX2-OT-239ENST00000626619 MPNDQ8N594 471 aa17.66■□□□□ 0.42
SOX2-OT-239ENST00000626619 RTFDC1Q9BY42 306 aaPredicted RBP17.66■□□□□ 0.42
SOX2-OT-239ENST00000626619 FKBP5Q13451 457 aaPredicted RBP17.65■□□□□ 0.42
SOX2-OT-239ENST00000626619 NIM1KQ8IY84 436 aa17.65■□□□□ 0.42
SOX2-OT-239ENST00000626619 DNAJC5GQ8N7S2 189 aa17.65■□□□□ 0.42
SOX2-OT-239ENST00000626619 WTIPA6NIX2 430 aaPredicted RBP17.64■□□□□ 0.41
SOX2-OT-239ENST00000626619 SCNN1DP51172 638 aa17.64■□□□□ 0.41
SOX2-OT-239ENST00000626619 EAPPQ56P03 285 aaPredicted RBP17.64■□□□□ 0.41
SOX2-OT-239ENST00000626619 UBE3BQ7Z3V4 1068 aa17.64■□□□□ 0.41
SOX2-OT-239ENST00000626619 POLLQ9UGP5 575 aa17.64■□□□□ 0.41
SOX2-OT-239ENST00000626619 LTBP1Q14766 1721 aa17.64■□□□□ 0.41
SOX2-OT-239ENST00000626619 YDJCA8MPS7 323 aa17.63■□□□□ 0.41
SOX2-OT-239ENST00000626619 PDE8AO60658 829 aa17.63■□□□□ 0.41
SOX2-OT-239ENST00000626619 EPS15P42566 896 aa17.63■□□□□ 0.41
SOX2-OT-239ENST00000626619 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
SOX2-OT-239ENST00000626619 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
SOX2-OT-239ENST00000626619 GPC2Q8N158 579 aa17.63■□□□□ 0.41
SOX2-OT-239ENST00000626619 MYH16Q9H6N6 1097 aa17.63■□□□□ 0.41
SOX2-OT-239ENST00000626619 NSFL1CQ9UNZ2 370 aaKnown RBP17.63■□□□□ 0.41
SOX2-OT-239ENST00000626619 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 RAD17O75943 681 aa17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 EPHX2P34913 555 aa17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 CTSWP56202 376 aa17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 EIF6P56537 245 aaKnown RBP17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 CXCL9Q07325 125 aa17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 GRIPAP1Q4V328 841 aa17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 CHADLQ6NUI6 762 aa17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 CDCA7LQ96GN5 454 aa17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 TMX4Q9H1E5 349 aaPredicted RBP17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 HACL1Q9UJ83 578 aa17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 CDHR2Q9BYE9 1310 aa17.62■□□□□ 0.41
SOX2-OT-239ENST00000626619 SHTN1A0MZ66 631 aa17.61■□□□□ 0.41
SOX2-OT-239ENST00000626619 IQCA1LA6NCM1 817 aa17.61■□□□□ 0.41
SOX2-OT-239ENST00000626619 RIMBP2O15034 1052 aa17.61■□□□□ 0.41
SOX2-OT-239ENST00000626619 CASP7P55210 303 aa17.61■□□□□ 0.41
SOX2-OT-239ENST00000626619 NEXNQ0ZGT2 675 aa17.61■□□□□ 0.41
SOX2-OT-239ENST00000626619 GCKRQ14397 625 aa17.61■□□□□ 0.41
SOX2-OT-239ENST00000626619 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
SOX2-OT-239ENST00000626619 GREM2Q9H772 168 aa17.61■□□□□ 0.41
SOX2-OT-239ENST00000626619 H7C1W4 665 aa17.6■□□□□ 0.41
SOX2-OT-239ENST00000626619 CCDC152Q4G0S7 254 aa17.6■□□□□ 0.41
SOX2-OT-239ENST00000626619 SUPT20HQ8NEM7 779 aa17.6■□□□□ 0.41
SOX2-OT-239ENST00000626619 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
SOX2-OT-239ENST00000626619 DBNDD1Q9H9R9 158 aa17.6■□□□□ 0.41
SOX2-OT-239ENST00000626619 KCNQ5Q9NR82 932 aa17.6■□□□□ 0.41
SOX2-OT-239ENST00000626619 ZNRF3Q9ULT6 936 aa17.6■□□□□ 0.41
SOX2-OT-239ENST00000626619 C6orf229H3BNL8 230 aa17.59■□□□□ 0.41
SOX2-OT-239ENST00000626619 FMR1Q06787 632 aaKnown RBP eCLIP17.59■□□□□ 0.41
SOX2-OT-239ENST00000626619 DOK7Q18PE1 504 aa17.59■□□□□ 0.41
SOX2-OT-239ENST00000626619 MAP1SQ66K74 1059 aaPredicted RBP17.59■□□□□ 0.41
SOX2-OT-239ENST00000626619 LDHDQ86WU2 507 aa17.59■□□□□ 0.41
SOX2-OT-239ENST00000626619 TBC1D16Q8TBP0 767 aa17.59■□□□□ 0.41
SOX2-OT-239ENST00000626619 GMPSP49915 693 aaPredicted RBP17.58■□□□□ 0.4
SOX2-OT-239ENST00000626619 BEND3Q5T5X7 828 aa17.58■□□□□ 0.4
SOX2-OT-239ENST00000626619 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
SOX2-OT-239ENST00000626619 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
SOX2-OT-239ENST00000626619 WASHC4Q2M389 1173 aa17.57■□□□□ 0.4
SOX2-OT-239ENST00000626619 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
SOX2-OT-239ENST00000626619 LINS1Q8NG48 757 aa17.57■□□□□ 0.4
SOX2-OT-239ENST00000626619 BCL2L13Q9BXK5 485 aa17.57■□□□□ 0.4
SOX2-OT-239ENST00000626619 ZBTB12Q9Y330 459 aaPredicted RBP17.57■□□□□ 0.4
SOX2-OT-239ENST00000626619 ADAMTSL1Q8N6G6 1762 aa17.57■□□□□ 0.4
SOX2-OT-239ENST00000626619 RTL9Q8NET4 1388 aa17.56■□□□□ 0.4
SOX2-OT-239ENST00000626619 PASKQ96RG2 1323 aa17.56■□□□□ 0.4
SOX2-OT-239ENST00000626619 UFL1O94874 794 aa17.56■□□□□ 0.4
SOX2-OT-239ENST00000626619 ITGBL1O95965 494 aaPredicted RBP17.56■□□□□ 0.4
SOX2-OT-239ENST00000626619 EPHA10Q5JZY3 1008 aa17.56■□□□□ 0.4
SOX2-OT-239ENST00000626619 ANKRD18AQ8IVF6 992 aa17.56■□□□□ 0.4
SOX2-OT-239ENST00000626619 SLFN5Q08AF3 891 aa17.55■□□□□ 0.4
SOX2-OT-239ENST00000626619 CIAPIN1Q6FI81 312 aa17.55■□□□□ 0.4
SOX2-OT-239ENST00000626619 KLRG1Q96E93 195 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms