RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 MAP3K2Q9Y2U5 619 aa13.93□□□□□ -0.18
SSBP4-215ENST00000625926 TNRC6CQ9HCJ0 1690 aaKnown RBP13.93□□□□□ -0.18
SSBP4-215ENST00000625926 PPIP5K2O43314 1243 aa13.92□□□□□ -0.18
SSBP4-215ENST00000625926 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
SSBP4-215ENST00000625926 CHADLQ6NUI6 762 aa13.92□□□□□ -0.18
SSBP4-215ENST00000625926 NIM1KQ8IY84 436 aa13.92□□□□□ -0.18
SSBP4-215ENST00000625926 TAF1DQ9H5J8 278 aaPredicted RBP13.92□□□□□ -0.18
SSBP4-215ENST00000625926 CWC25Q9NXE8 425 aaPredicted RBP13.92□□□□□ -0.18
SSBP4-215ENST00000625926 FANCIQ9NVI1 1328 aa13.91□□□□□ -0.18
SSBP4-215ENST00000625926 WDR90Q96KV7 1748 aa13.91□□□□□ -0.18
SSBP4-215ENST00000625926 PI4KAP2A4QPH2 592 aa13.91□□□□□ -0.18
SSBP4-215ENST00000625926 PCCAP05165 728 aaPredicted RBP13.91□□□□□ -0.18
SSBP4-215ENST00000625926 HTRA3P83110 453 aa13.91□□□□□ -0.18
SSBP4-215ENST00000625926 PI4KAP1Q8N8J0 262 aa13.91□□□□□ -0.18
SSBP4-215ENST00000625926 GJA3Q9Y6H8 435 aa13.91□□□□□ -0.18
SSBP4-215ENST00000625926 NUP98P52948 1817 aa13.9□□□□□ -0.18
SSBP4-215ENST00000625926 POTEIP0CG38 1075 aa13.9□□□□□ -0.18
SSBP4-215ENST00000625926 POTEJP0CG39 1038 aa13.9□□□□□ -0.18
SSBP4-215ENST00000625926 EPHX2P34913 555 aa13.9□□□□□ -0.18
SSBP4-215ENST00000625926 NEXNQ0ZGT2 675 aa13.9□□□□□ -0.18
SSBP4-215ENST00000625926 AOC3Q16853 763 aa13.9□□□□□ -0.18
SSBP4-215ENST00000625926 PNMA8AQ86V59 439 aaPredicted RBP13.9□□□□□ -0.18
SSBP4-215ENST00000625926 LDHDQ86WU2 507 aa13.9□□□□□ -0.18
SSBP4-215ENST00000625926 CELF1Q92879 486 aaKnown RBP13.9□□□□□ -0.18
SSBP4-215ENST00000625926 ZNRF3Q9ULT6 936 aa13.9□□□□□ -0.18
SSBP4-215ENST00000625926 SBF1O95248 1867 aa13.9□□□□□ -0.18
SSBP4-215ENST00000625926 FER1L6Q2WGJ9 1857 aa13.9□□□□□ -0.18
SSBP4-215ENST00000625926 PDE8AO60658 829 aa13.89□□□□□ -0.19
SSBP4-215ENST00000625926 VAMP4O75379 141 aa13.89□□□□□ -0.19
SSBP4-215ENST00000625926 RPS8P62241 208 aaKnown RBP13.89□□□□□ -0.19
SSBP4-215ENST00000625926 EXOSC9Q06265 439 aaKnown RBP13.89□□□□□ -0.19
SSBP4-215ENST00000625926 KIAA2012Q0VF49 1180 aa13.89□□□□□ -0.19
SSBP4-215ENST00000625926 EAPPQ56P03 285 aaPredicted RBP13.89□□□□□ -0.19
SSBP4-215ENST00000625926 G2E3Q7L622 706 aa13.89□□□□□ -0.19
SSBP4-215ENST00000625926 JMYQ8N9B5 988 aa13.89□□□□□ -0.19
SSBP4-215ENST00000625926 JARID2Q92833 1246 aaPredicted RBP13.89□□□□□ -0.19
SSBP4-215ENST00000625926 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
SSBP4-215ENST00000625926 NSFL1CQ9UNZ2 370 aaKnown RBP13.89□□□□□ -0.19
SSBP4-215ENST00000625926 CLEC11AQ9Y240 323 aa13.89□□□□□ -0.19
SSBP4-215ENST00000625926 IGKV5-2P06315 115 aa13.88□□□□□ -0.19
SSBP4-215ENST00000625926 LMOD1P29536 600 aaPredicted RBP13.88□□□□□ -0.19
SSBP4-215ENST00000625926 CCDC152Q4G0S7 254 aa13.88□□□□□ -0.19
SSBP4-215ENST00000625926 KLRG1Q96E93 195 aa13.88□□□□□ -0.19
SSBP4-215ENST00000625926 ARFGEF2Q9Y6D5 1785 aa13.87□□□□□ -0.19
SSBP4-215ENST00000625926 CXCL9Q07325 125 aa13.87□□□□□ -0.19
SSBP4-215ENST00000625926 FLIIQ13045 1269 aa13.87□□□□□ -0.19
SSBP4-215ENST00000625926 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
SSBP4-215ENST00000625926 SEC31BQ9NQW1 1179 aa13.87□□□□□ -0.19
SSBP4-215ENST00000625926 CDHR2Q9BYE9 1310 aa13.87□□□□□ -0.19
SSBP4-215ENST00000625926 TIAM2Q8IVF5 1701 aa13.87□□□□□ -0.19
SSBP4-215ENST00000625926 SCNN1DP51172 638 aa13.86□□□□□ -0.19
SSBP4-215ENST00000625926 FKBP5Q13451 457 aaPredicted RBP13.86□□□□□ -0.19
SSBP4-215ENST00000625926 WASHC4Q2M389 1173 aa13.86□□□□□ -0.19
SSBP4-215ENST00000625926 CWF19L2Q2TBE0 894 aaKnown RBP13.86□□□□□ -0.19
SSBP4-215ENST00000625926 NEURL1BA8MQ27 555 aa13.85□□□□□ -0.19
SSBP4-215ENST00000625926 C6orf229H3BNL8 230 aa13.85□□□□□ -0.19
SSBP4-215ENST00000625926 EPS15P42566 896 aa13.85□□□□□ -0.19
SSBP4-215ENST00000625926 GPSM2P81274 684 aa13.85□□□□□ -0.19
SSBP4-215ENST00000625926 TNIP1Q15025 636 aa13.85□□□□□ -0.19
SSBP4-215ENST00000625926 CIAPIN1Q6FI81 312 aa13.85□□□□□ -0.19
SSBP4-215ENST00000625926 DNAAF4Q8WXU2 420 aa13.85□□□□□ -0.19
SSBP4-215ENST00000625926 CCDC85AQ96PX6 553 aaPredicted RBP13.85□□□□□ -0.19
SSBP4-215ENST00000625926 EYA3Q99504 573 aa13.85□□□□□ -0.19
SSBP4-215ENST00000625926 COL4A5P29400 1685 aa13.85□□□□□ -0.19
SSBP4-215ENST00000625926 H7C1W4 665 aa13.84□□□□□ -0.19
SSBP4-215ENST00000625926 RAD17O75943 681 aa13.84□□□□□ -0.19
SSBP4-215ENST00000625926 ITGBL1O95965 494 aaPredicted RBP13.84□□□□□ -0.19
SSBP4-215ENST00000625926 USP50Q70EL3 339 aaPredicted RBP13.84□□□□□ -0.19
SSBP4-215ENST00000625926 CNTROBQ8N137 903 aa13.84□□□□□ -0.19
SSBP4-215ENST00000625926 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
SSBP4-215ENST00000625926 POLLQ9UGP5 575 aa13.84□□□□□ -0.19
SSBP4-215ENST00000625926 PASKQ96RG2 1323 aa13.84□□□□□ -0.19
SSBP4-215ENST00000625926 RIMBP2O15034 1052 aa13.83□□□□□ -0.2
SSBP4-215ENST00000625926 CTSWP56202 376 aa13.83□□□□□ -0.2
SSBP4-215ENST00000625926 GCKRQ14397 625 aa13.83□□□□□ -0.2
SSBP4-215ENST00000625926 MAP1SQ66K74 1059 aaPredicted RBP13.83□□□□□ -0.2
SSBP4-215ENST00000625926 ANKRD18AQ8IVF6 992 aa13.83□□□□□ -0.2
SSBP4-215ENST00000625926 LINS1Q8NG48 757 aa13.83□□□□□ -0.2
SSBP4-215ENST00000625926 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
SSBP4-215ENST00000625926 TBC1D16Q8TBP0 767 aa13.83□□□□□ -0.2
SSBP4-215ENST00000625926 BCL2L13Q9BXK5 485 aa13.83□□□□□ -0.2
SSBP4-215ENST00000625926 PODXL2Q9NZ53 605 aa13.83□□□□□ -0.2
SSBP4-215ENST00000625926 GPRC5DQ9NZD1 345 aa13.83□□□□□ -0.2
SSBP4-215ENST00000625926 ANKIB1Q9P2G1 1089 aa13.83□□□□□ -0.2
SSBP4-215ENST00000625926 GMPSP49915 693 aaPredicted RBP13.82□□□□□ -0.2
SSBP4-215ENST00000625926 UBE3BQ7Z3V4 1068 aa13.82□□□□□ -0.2
SSBP4-215ENST00000625926 CDC5LQ99459 802 aaKnown RBP13.82□□□□□ -0.2
SSBP4-215ENST00000625926 ZC3H12CQ9C0D7 883 aaKnown RBP13.82□□□□□ -0.2
SSBP4-215ENST00000625926 ADARB2Q9NS39 739 aaKnown RBP13.82□□□□□ -0.2
SSBP4-215ENST00000625926 ZNF521Q96K83 1311 aa13.82□□□□□ -0.2
SSBP4-215ENST00000625926 YDJCA8MPS7 323 aa13.81□□□□□ -0.2
SSBP4-215ENST00000625926 GREM2Q9H772 168 aa13.81□□□□□ -0.2
SSBP4-215ENST00000625926 DBNDD1Q9H9R9 158 aa13.81□□□□□ -0.2
SSBP4-215ENST00000625926 GGA1Q9UJY5 639 aa13.81□□□□□ -0.2
SSBP4-215ENST00000625926 TMEM88BA6NKF7 163 aa13.8□□□□□ -0.2
SSBP4-215ENST00000625926 G3V3G9 751 aa13.8□□□□□ -0.2
SSBP4-215ENST00000625926 UFL1O94874 794 aa13.8□□□□□ -0.2
SSBP4-215ENST00000625926 DOK7Q18PE1 504 aa13.8□□□□□ -0.2
SSBP4-215ENST00000625926 DCAF8Q5TAQ9 597 aa13.8□□□□□ -0.2
SSBP4-215ENST00000625926 PLA2G12BQ9BX93 195 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms