RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 KIAA2012Q0VF49 1180 aa18.87■□□□□ 0.61
TUBB3-215ENST00000625617 WBP1LQ9NX94 342 aa18.87■□□□□ 0.61
TUBB3-215ENST00000625617 TRIM35Q9UPQ4 493 aa18.87■□□□□ 0.61
TUBB3-215ENST00000625617 CDHR2Q9BYE9 1310 aa18.86■□□□□ 0.61
TUBB3-215ENST00000625617 WDR33Q9C0J8 1336 aaKnown RBP18.86■□□□□ 0.61
TUBB3-215ENST00000625617 CXCL9Q07325 125 aa18.86■□□□□ 0.61
TUBB3-215ENST00000625617 PLBD2Q8NHP8 589 aa18.86■□□□□ 0.61
TUBB3-215ENST00000625617 TRAF5O00463 557 aa18.85■□□□□ 0.61
TUBB3-215ENST00000625617 GMPSP49915 693 aaPredicted RBP18.85■□□□□ 0.61
TUBB3-215ENST00000625617 FMR1Q06787 632 aaKnown RBP eCLIP18.85■□□□□ 0.61
TUBB3-215ENST00000625617 CIAPIN1Q6FI81 312 aa18.85■□□□□ 0.61
TUBB3-215ENST00000625617 PAXIP1Q6ZW49 1069 aaPredicted RBP18.85■□□□□ 0.61
TUBB3-215ENST00000625617 TMC4Q7Z404 712 aa18.85■□□□□ 0.61
TUBB3-215ENST00000625617 MAP2K1Q02750 393 aaPredicted RBP18.84■□□□□ 0.61
TUBB3-215ENST00000625617 ZNF428Q96B54 188 aa18.84■□□□□ 0.61
TUBB3-215ENST00000625617 DBF4Q9UBU7 674 aaPredicted RBP18.84■□□□□ 0.61
TUBB3-215ENST00000625617 RAD17O75943 681 aa18.83■□□□□ 0.6
TUBB3-215ENST00000625617 ECE1P42892 770 aa18.83■□□□□ 0.6
TUBB3-215ENST00000625617 LBX1P52954 281 aa18.83■□□□□ 0.6
TUBB3-215ENST00000625617 TNIP1Q15025 636 aa18.83■□□□□ 0.6
TUBB3-215ENST00000625617 ANKRD13DQ6ZTN6 518 aa18.83■□□□□ 0.6
TUBB3-215ENST00000625617 CAPNS2Q96L46 248 aa18.83■□□□□ 0.6
TUBB3-215ENST00000625617 BCL2L13Q9BXK5 485 aa18.83■□□□□ 0.6
TUBB3-215ENST00000625617 DUOX1Q9NRD9 1551 aa18.83■□□□□ 0.6
TUBB3-215ENST00000625617 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
TUBB3-215ENST00000625617 ISCA1Q9BUE6 129 aa18.82■□□□□ 0.6
TUBB3-215ENST00000625617 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
TUBB3-215ENST00000625617 LAMB2P55268 1798 aa18.82■□□□□ 0.6
TUBB3-215ENST00000625617 THSD7BQ9C0I4 1608 aa18.82■□□□□ 0.6
TUBB3-215ENST00000625617 ATP5J2-PTCD1G3V325 749 aa18.81■□□□□ 0.6
TUBB3-215ENST00000625617 HSPA8P11142 646 aaKnown RBP18.81■□□□□ 0.6
TUBB3-215ENST00000625617 GRM1Q13255 1194 aa18.81■□□□□ 0.6
TUBB3-215ENST00000625617 DUSP27Q5VZP5 1158 aa18.81■□□□□ 0.6
TUBB3-215ENST00000625617 CST9Q5W186 159 aa18.81■□□□□ 0.6
TUBB3-215ENST00000625617 FAM89AQ96GI7 184 aa18.81■□□□□ 0.6
TUBB3-215ENST00000625617 HYPKQ9NX55 129 aa18.81■□□□□ 0.6
TUBB3-215ENST00000625617 TLL2Q9Y6L7 1015 aa18.81■□□□□ 0.6
TUBB3-215ENST00000625617 CYP4F22Q6NT55 531 aa18.8■□□□□ 0.6
TUBB3-215ENST00000625617 LRRC37AA6NMS7 1700 aa18.8■□□□□ 0.6
TUBB3-215ENST00000625617 YDJCA8MPS7 323 aa18.79■□□□□ 0.6
TUBB3-215ENST00000625617 CELF2O95319 508 aaKnown RBP18.79■□□□□ 0.6
TUBB3-215ENST00000625617 SF3B3Q15393 1217 aaKnown RBP18.79■□□□□ 0.6
TUBB3-215ENST00000625617 TRPM4Q8TD43 1214 aa18.79■□□□□ 0.6
TUBB3-215ENST00000625617 CELF1Q92879 486 aaKnown RBP18.79■□□□□ 0.6
TUBB3-215ENST00000625617 GLIS2Q9BZE0 524 aaPredicted RBP18.79■□□□□ 0.6
TUBB3-215ENST00000625617 MBIPQ9NS73 344 aa18.79■□□□□ 0.6
TUBB3-215ENST00000625617 GOLGA2Q08379 1002 aa18.78■□□□□ 0.6
TUBB3-215ENST00000625617 RTL5Q5HYW3 569 aaPredicted RBP18.78■□□□□ 0.6
TUBB3-215ENST00000625617 ZC3H15Q8WU90 426 aaKnown RBP18.78■□□□□ 0.6
TUBB3-215ENST00000625617 GPR101Q96P66 508 aaPredicted RBP18.78■□□□□ 0.6
TUBB3-215ENST00000625617 BEGAINQ9BUH8 593 aa18.78■□□□□ 0.6
TUBB3-215ENST00000625617 NSFL1CQ9UNZ2 370 aaKnown RBP18.78■□□□□ 0.6
TUBB3-215ENST00000625617 DDX60Q8IY21 1712 aaKnown RBP18.77■□□□□ 0.6
TUBB3-215ENST00000625617 IRS4O14654 1257 aaPredicted RBP18.77■□□□□ 0.6
TUBB3-215ENST00000625617 WASHC4Q2M389 1173 aa18.77■□□□□ 0.6
TUBB3-215ENST00000625617 MICALL2Q8IY33 904 aa18.77■□□□□ 0.6
TUBB3-215ENST00000625617 CNOT7Q9UIV1 285 aaKnown RBP18.77■□□□□ 0.6
TUBB3-215ENST00000625617 C6orf229H3BNL8 230 aa18.76■□□□□ 0.59
TUBB3-215ENST00000625617 H7C1D1 291 aa18.76■□□□□ 0.59
TUBB3-215ENST00000625617 CALD1Q05682 793 aaKnown RBP18.76■□□□□ 0.59
TUBB3-215ENST00000625617 TRIM28Q13263 835 aaKnown RBP18.76■□□□□ 0.59
TUBB3-215ENST00000625617 RIC3Q7Z5B4 369 aa18.76■□□□□ 0.59
TUBB3-215ENST00000625617 SAPCD2Q86UD0 394 aa18.76■□□□□ 0.59
TUBB3-215ENST00000625617 ZNF408Q9H9D4 720 aa18.76■□□□□ 0.59
TUBB3-215ENST00000625617 DBNDD1Q9H9R9 158 aa18.76■□□□□ 0.59
TUBB3-215ENST00000625617 IFT57Q9NWB7 429 aa18.76■□□□□ 0.59
TUBB3-215ENST00000625617 PGAP2Q9UHJ9 254 aa18.76■□□□□ 0.59
TUBB3-215ENST00000625617 SHTN1A0MZ66 631 aa18.75■□□□□ 0.59
TUBB3-215ENST00000625617 HIRAP54198 1017 aaPredicted RBP18.75■□□□□ 0.59
TUBB3-215ENST00000625617 GPSM2P81274 684 aa18.75■□□□□ 0.59
TUBB3-215ENST00000625617 EYA3Q99504 573 aa18.75■□□□□ 0.59
TUBB3-215ENST00000625617 PRKRIP1Q9H875 184 aaPredicted RBP18.75■□□□□ 0.59
TUBB3-215ENST00000625617 PSMD14O00487 310 aa18.74■□□□□ 0.59
TUBB3-215ENST00000625617 ZNF853P0CG23 659 aa18.74■□□□□ 0.59
TUBB3-215ENST00000625617 HSP90B1P14625 803 aaKnown RBP18.74■□□□□ 0.59
TUBB3-215ENST00000625617 CDC37L1Q7L3B6 337 aa18.74■□□□□ 0.59
TUBB3-215ENST00000625617 ZBTB38Q8NAP3 1195 aaPredicted RBP18.74■□□□□ 0.59
TUBB3-215ENST00000625617 DPF2Q92785 391 aa18.74■□□□□ 0.59
TUBB3-215ENST00000625617 ZBTB12Q9Y330 459 aaPredicted RBP18.74■□□□□ 0.59
TUBB3-215ENST00000625617 COL4A1P02462 1669 aa18.73■□□□□ 0.59
TUBB3-215ENST00000625617 APAF1O14727 1248 aa18.73■□□□□ 0.59
TUBB3-215ENST00000625617 RIMBP2O15034 1052 aa18.73■□□□□ 0.59
TUBB3-215ENST00000625617 ECE2O60344 883 aa18.73■□□□□ 0.59
TUBB3-215ENST00000625617 AOC2O75106 756 aa18.73■□□□□ 0.59
TUBB3-215ENST00000625617 MAP2K2P36507 400 aa18.73■□□□□ 0.59
TUBB3-215ENST00000625617 GNAI1P63096 354 aa18.73■□□□□ 0.59
TUBB3-215ENST00000625617 HHIPL1Q96JK4 782 aa18.73■□□□□ 0.59
TUBB3-215ENST00000625617 POLLQ9UGP5 575 aa18.73■□□□□ 0.59
TUBB3-215ENST00000625617 TRPM7Q96QT4 1865 aa18.73■□□□□ 0.59
TUBB3-215ENST00000625617 RPS12P25398 132 aaKnown RBP18.72■□□□□ 0.59
TUBB3-215ENST00000625617 RPS8P62241 208 aaKnown RBP18.72■□□□□ 0.59
TUBB3-215ENST00000625617 PHAXQ9H814 394 aaKnown RBP18.72■□□□□ 0.59
TUBB3-215ENST00000625617 ELL2O00472 640 aaPredicted RBP18.71■□□□□ 0.59
TUBB3-215ENST00000625617 DOK7Q18PE1 504 aa18.71■□□□□ 0.59
TUBB3-215ENST00000625617 SAMD7Q7Z3H4 446 aa18.71■□□□□ 0.59
TUBB3-215ENST00000625617 TBC1D16Q8TBP0 767 aa18.71■□□□□ 0.59
TUBB3-215ENST00000625617 MYD88Q99836 296 aa18.71■□□□□ 0.59
TUBB3-215ENST00000625617 RTL9Q8NET4 1388 aa18.7■□□□□ 0.58
TUBB3-215ENST00000625617 UFL1O94874 794 aa18.7■□□□□ 0.58
TUBB3-215ENST00000625617 TAF1P21675 1872 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms