RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 PALD1Q9ULE6 856 aa23.87■■□□□ 1.41
TREX1-205ENST00000625293 RAD50Q92878 1312 aa23.87■■□□□ 1.41
TREX1-205ENST00000625293 RREB1Q92766 1687 aa23.87■■□□□ 1.41
TREX1-205ENST00000625293 HSP90AB3PQ58FF7 597 aa23.86■■□□□ 1.41
TREX1-205ENST00000625293 LSG1Q9H089 658 aaKnown RBP23.86■■□□□ 1.41
TREX1-205ENST00000625293 CIZ1Q9ULV3 898 aaPredicted RBP23.86■■□□□ 1.41
TREX1-205ENST00000625293 ZBTB38Q8NAP3 1195 aaPredicted RBP23.86■■□□□ 1.41
TREX1-205ENST00000625293 ERVV-1B6SEH8 477 aa23.85■■□□□ 1.41
TREX1-205ENST00000625293 HSPA4P34932 840 aa23.85■■□□□ 1.41
TREX1-205ENST00000625293 NLRP10Q86W26 655 aa23.85■■□□□ 1.41
TREX1-205ENST00000625293 GPR108Q9NPR9 543 aa23.85■■□□□ 1.41
TREX1-205ENST00000625293 CHMP3Q9Y3E7 222 aa23.85■■□□□ 1.41
TREX1-205ENST00000625293 CDHR2Q9BYE9 1310 aa23.85■■□□□ 1.41
TREX1-205ENST00000625293 ST18O60284 1047 aa23.84■■□□□ 1.41
TREX1-205ENST00000625293 ATP5JP18859 108 aa23.84■■□□□ 1.41
TREX1-205ENST00000625293 ANKRD36CQ5JPF3 1778 aa23.84■■□□□ 1.41
TREX1-205ENST00000625293 CIAO1O76071 339 aa23.83■■□□□ 1.41
TREX1-205ENST00000625293 IL15P40933 162 aaPredicted RBP23.83■■□□□ 1.41
TREX1-205ENST00000625293 INTS5Q6P9B9 1019 aaKnown RBP23.83■■□□□ 1.41
TREX1-205ENST00000625293 CWC27Q6UX04 472 aaKnown RBP23.83■■□□□ 1.41
TREX1-205ENST00000625293 BOLA2Q9H3K6 86 aa23.83■■□□□ 1.41
TREX1-205ENST00000625293 DIAPH3Q9NSV4 1193 aa23.83■■□□□ 1.41
TREX1-205ENST00000625293 EYA2O00167 538 aa23.83■■□□□ 1.4
TREX1-205ENST00000625293 CSF1RP07333 972 aa23.83■■□□□ 1.4
TREX1-205ENST00000625293 EIF5P55010 431 aaKnown RBP23.83■■□□□ 1.4
TREX1-205ENST00000625293 SNRKQ9NRH2 765 aa23.83■■□□□ 1.4
TREX1-205ENST00000625293 LOC102724428A0A0B4J2F2 783 aa23.82■■□□□ 1.4
TREX1-205ENST00000625293 SIK1P57059 783 aa23.82■■□□□ 1.4
TREX1-205ENST00000625293 RUFY2Q8WXA3 655 aa23.82■■□□□ 1.4
TREX1-205ENST00000625293 FAM89AQ96GI7 184 aa23.82■■□□□ 1.4
TREX1-205ENST00000625293 DBNDD2Q9BQY9 259 aa23.81■■□□□ 1.4
TREX1-205ENST00000625293 PALLDQ8WX93 1383 aa23.81■■□□□ 1.4
TREX1-205ENST00000625293 HIP1O00291 1037 aa23.8■■□□□ 1.4
TREX1-205ENST00000625293 DZIP3Q86Y13 1208 aaKnown RBP23.8■■□□□ 1.4
TREX1-205ENST00000625293 PDGFDQ9GZP0 370 aaPredicted RBP23.8■■□□□ 1.4
TREX1-205ENST00000625293 CCDC87Q9NVE4 849 aa23.8■■□□□ 1.4
TREX1-205ENST00000625293 CCNL1Q9UK58 526 aaPredicted RBP23.8■■□□□ 1.4
TREX1-205ENST00000625293 RGPD3A6NKT7 1758 aaPredicted RBP23.8■■□□□ 1.4
TREX1-205ENST00000625293 RGPD4Q7Z3J3 1758 aa23.8■■□□□ 1.4
TREX1-205ENST00000625293 ITPK1Q13572 414 aa23.8■■□□□ 1.4
TREX1-205ENST00000625293 LRRC24Q50LG9 513 aa23.8■■□□□ 1.4
TREX1-205ENST00000625293 ZNF594Q96JF6 807 aaPredicted RBP23.8■■□□□ 1.4
TREX1-205ENST00000625293 FBXO3Q9UK99 471 aa23.8■■□□□ 1.4
TREX1-205ENST00000625293 ZNF609O15014 1411 aa23.79■■□□□ 1.4
TREX1-205ENST00000625293 GPTP24298 496 aa23.79■■□□□ 1.4
TREX1-205ENST00000625293 ATP6V1AP38606 617 aa23.79■■□□□ 1.4
TREX1-205ENST00000625293 ARXQ96QS3 562 aa23.79■■□□□ 1.4
TREX1-205ENST00000625293 ZNF827Q17R98 1081 aa23.78■■□□□ 1.4
TREX1-205ENST00000625293 ZNF34Q8IZ26 560 aa23.78■■□□□ 1.4
TREX1-205ENST00000625293 IL27Q8NEV9 243 aa23.78■■□□□ 1.4
TREX1-205ENST00000625293 RFX7Q2KHR2 1363 aa23.78■■□□□ 1.4
TREX1-205ENST00000625293 CRKLP46109 303 aaKnown RBP23.78■■□□□ 1.4
TREX1-205ENST00000625293 SMARCC1Q92922 1105 aaPredicted RBP23.78■■□□□ 1.4
TREX1-205ENST00000625293 TBC1D2BQ9UPU7 963 aa23.78■■□□□ 1.4
TREX1-205ENST00000625293 NUP98P52948 1817 aa23.77■■□□□ 1.4
TREX1-205ENST00000625293 NEK4P51957 841 aa23.77■■□□□ 1.4
TREX1-205ENST00000625293 CCDC57Q2TAC2 916 aa23.77■■□□□ 1.4
TREX1-205ENST00000625293 KIAA1211Q6ZU35 1233 aa23.77■■□□□ 1.4
TREX1-205ENST00000625293 PUS3Q9BZE2 481 aaKnown RBP23.77■■□□□ 1.4
TREX1-205ENST00000625293 ZNF831Q5JPB2 1677 aa23.77■■□□□ 1.4
TREX1-205ENST00000625293 UBN2Q6ZU65 1347 aa23.76■■□□□ 1.39
TREX1-205ENST00000625293 HSP90AA1P07900 732 aaKnown RBP23.76■■□□□ 1.39
TREX1-205ENST00000625293 MCM2P49736 904 aa23.76■■□□□ 1.39
TREX1-205ENST00000625293 NMIQ13287 307 aaPredicted RBP23.76■■□□□ 1.39
TREX1-205ENST00000625293 SLC27A3Q5K4L6 730 aa23.76■■□□□ 1.39
TREX1-205ENST00000625293 SYNE4Q8N205 404 aa23.76■■□□□ 1.39
TREX1-205ENST00000625293 HAUS7Q99871 368 aa23.76■■□□□ 1.39
TREX1-205ENST00000625293 LY75O60449 1722 aa23.76■■□□□ 1.39
TREX1-205ENST00000625293 RAB3GAP1Q15042 981 aa23.75■■□□□ 1.39
TREX1-205ENST00000625293 SLC15A2Q16348 729 aa23.75■■□□□ 1.39
TREX1-205ENST00000625293 KCNB2Q92953 911 aa23.75■■□□□ 1.39
TREX1-205ENST00000625293 FAM227BQ96M60 508 aa23.75■■□□□ 1.39
TREX1-205ENST00000625293 FSD1Q9BTV5 496 aa23.75■■□□□ 1.39
TREX1-205ENST00000625293 FOXD4L1Q9NU39 408 aa23.75■■□□□ 1.39
TREX1-205ENST00000625293 SNX14Q9Y5W7 946 aa23.75■■□□□ 1.39
TREX1-205ENST00000625293 MED23Q9ULK4 1368 aa23.75■■□□□ 1.39
TREX1-205ENST00000625293 PTH1RQ03431 593 aa23.75■■□□□ 1.39
TREX1-205ENST00000625293 SMIM5Q71RC9 77 aa23.74■■□□□ 1.39
TREX1-205ENST00000625293 TTLL11Q8NHH1 800 aa23.74■■□□□ 1.39
TREX1-205ENST00000625293 EDC3Q96F86 508 aaKnown RBP23.74■■□□□ 1.39
TREX1-205ENST00000625293 CCDC171Q6TFL3 1326 aa23.74■■□□□ 1.39
TREX1-205ENST00000625293 STK32BQ9NY57 414 aa23.73■■□□□ 1.39
TREX1-205ENST00000625293 COL5A3P25940 1745 aaPredicted RBP23.73■■□□□ 1.39
TREX1-205ENST00000625293 A0A0D9SFI3 127 aa23.73■■□□□ 1.39
TREX1-205ENST00000625293 CAMTA2O94983 1202 aa23.73■■□□□ 1.39
TREX1-205ENST00000625293 MCM4P33991 863 aa23.73■■□□□ 1.39
TREX1-205ENST00000625293 CTSWP56202 376 aa23.73■■□□□ 1.39
TREX1-205ENST00000625293 RASEFQ8IZ41 740 aa23.73■■□□□ 1.39
TREX1-205ENST00000625293 AKT1S1Q96B36 256 aa23.73■■□□□ 1.39
TREX1-205ENST00000625293 TRMT112Q9UI30 125 aaKnown RBP23.73■■□□□ 1.39
TREX1-205ENST00000625293 IRS4O14654 1257 aaPredicted RBP23.72■■□□□ 1.39
TREX1-205ENST00000625293 TIMM10P62072 90 aa23.72■■□□□ 1.39
TREX1-205ENST00000625293 IFIT5Q13325 482 aaKnown RBP23.72■■□□□ 1.39
TREX1-205ENST00000625293 DEKP35659 375 aaKnown RBP23.71■■□□□ 1.39
TREX1-205ENST00000625293 MYH14Q7Z406 1995 aaKnown RBP23.71■■□□□ 1.39
TREX1-205ENST00000625293 RIC1Q4ADV7 1423 aa23.71■■□□□ 1.39
TREX1-205ENST00000625293 A0A1B0GUL7 405 aa23.7■■□□□ 1.39
TREX1-205ENST00000625293 MAP4K1Q92918 833 aa23.7■■□□□ 1.39
TREX1-205ENST00000625293 TNPO1Q92973 898 aaKnown RBP23.7■■□□□ 1.39
TREX1-205ENST00000625293 TMX3Q96JJ7 454 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms