RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 HDGFL1Q5TGJ6 251 aa24.74■■□□□ 1.55
SMN1-211ENST00000625245 PAXIP1Q6ZW49 1069 aaPredicted RBP24.74■■□□□ 1.55
SMN1-211ENST00000625245 PRDM10Q9NQV6 1147 aa24.74■■□□□ 1.55
SMN1-211ENST00000625245 GPRC5DQ9NZD1 345 aa24.74■■□□□ 1.55
SMN1-211ENST00000625245 WDR33Q9C0J8 1336 aaKnown RBP24.74■■□□□ 1.55
SMN1-211ENST00000625245 TRPM7Q96QT4 1865 aa24.73■■□□□ 1.55
SMN1-211ENST00000625245 TRAF5O00463 557 aa24.73■■□□□ 1.55
SMN1-211ENST00000625245 GRAPQ13588 217 aa24.73■■□□□ 1.55
SMN1-211ENST00000625245 GRAPLQ8TC17 118 aaPredicted RBP24.73■■□□□ 1.55
SMN1-211ENST00000625245 ADARB2Q9NS39 739 aaKnown RBP24.73■■□□□ 1.55
SMN1-211ENST00000625245 GMPSP49915 693 aaPredicted RBP24.72■■□□□ 1.55
SMN1-211ENST00000625245 LBX1P52954 281 aa24.72■■□□□ 1.55
SMN1-211ENST00000625245 RAD17O75943 681 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 GRM1Q13255 1194 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 CIAPIN1Q6FI81 312 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 ANKRD13DQ6ZTN6 518 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 PLBD2Q8NHP8 589 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 BCL2L13Q9BXK5 485 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 ADAMTS8Q9UP79 889 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 ATP5J2-PTCD1G3V325 749 aa24.7■■□□□ 1.54
SMN1-211ENST00000625245 KIAA2012Q0VF49 1180 aa24.7■■□□□ 1.54
SMN1-211ENST00000625245 MAP2K1Q02750 393 aaPredicted RBP24.69■■□□□ 1.54
SMN1-211ENST00000625245 TNIP1Q15025 636 aa24.69■■□□□ 1.54
SMN1-211ENST00000625245 FAM89AQ96GI7 184 aa24.69■■□□□ 1.54
SMN1-211ENST00000625245 DBF4Q9UBU7 674 aaPredicted RBP24.69■■□□□ 1.54
SMN1-211ENST00000625245 CST9Q5W186 159 aa24.68■■□□□ 1.54
SMN1-211ENST00000625245 CAPNS2Q96L46 248 aa24.68■■□□□ 1.54
SMN1-211ENST00000625245 HOXB7P09629 217 aa24.67■■□□□ 1.54
SMN1-211ENST00000625245 ECE1P42892 770 aa24.67■■□□□ 1.54
SMN1-211ENST00000625245 RTL5Q5HYW3 569 aaPredicted RBP24.67■■□□□ 1.54
SMN1-211ENST00000625245 CYP4F22Q6NT55 531 aa24.67■■□□□ 1.54
SMN1-211ENST00000625245 TMC4Q7Z404 712 aa24.67■■□□□ 1.54
SMN1-211ENST00000625245 ISCA1Q9BUE6 129 aa24.67■■□□□ 1.54
SMN1-211ENST00000625245 DDX60Q8IY21 1712 aaKnown RBP24.66■■□□□ 1.54
SMN1-211ENST00000625245 DUSP27Q5VZP5 1158 aa24.66■■□□□ 1.54
SMN1-211ENST00000625245 HSPA8P11142 646 aaKnown RBP24.65■■□□□ 1.54
SMN1-211ENST00000625245 CFAP44Q96MT7 982 aa24.65■■□□□ 1.54
SMN1-211ENST00000625245 GPR101Q96P66 508 aaPredicted RBP24.65■■□□□ 1.54
SMN1-211ENST00000625245 GLIS2Q9BZE0 524 aaPredicted RBP24.65■■□□□ 1.54
SMN1-211ENST00000625245 HYPKQ9NX55 129 aa24.65■■□□□ 1.54
SMN1-211ENST00000625245 NSFL1CQ9UNZ2 370 aaKnown RBP24.65■■□□□ 1.54
SMN1-211ENST00000625245 CELF1Q92879 486 aaKnown RBP24.64■■□□□ 1.54
SMN1-211ENST00000625245 CNOT7Q9UIV1 285 aaKnown RBP24.64■■□□□ 1.54
SMN1-211ENST00000625245 TLL2Q9Y6L7 1015 aa24.64■■□□□ 1.54
SMN1-211ENST00000625245 YDJCA8MPS7 323 aa24.63■■□□□ 1.53
SMN1-211ENST00000625245 CELF2O95319 508 aaKnown RBP24.63■■□□□ 1.53
SMN1-211ENST00000625245 SF3B3Q15393 1217 aaKnown RBP24.63■■□□□ 1.53
SMN1-211ENST00000625245 BEGAINQ9BUH8 593 aa24.63■■□□□ 1.53
SMN1-211ENST00000625245 MBIPQ9NS73 344 aa24.63■■□□□ 1.53
SMN1-211ENST00000625245 CDHR2Q9BYE9 1310 aa24.62■■□□□ 1.53
SMN1-211ENST00000625245 C6orf229H3BNL8 230 aa24.62■■□□□ 1.53
SMN1-211ENST00000625245 RIMBP2O15034 1052 aa24.62■■□□□ 1.53
SMN1-211ENST00000625245 HIRAP54198 1017 aaPredicted RBP24.62■■□□□ 1.53
SMN1-211ENST00000625245 WASHC4Q2M389 1173 aa24.62■■□□□ 1.53
SMN1-211ENST00000625245 ZNF408Q9H9D4 720 aa24.62■■□□□ 1.53
SMN1-211ENST00000625245 SHTN1A0MZ66 631 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 H7C1D1 291 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 IRS4O14654 1257 aaPredicted RBP24.61■■□□□ 1.53
SMN1-211ENST00000625245 RIC3Q7Z5B4 369 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 TRPM4Q8TD43 1214 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 DBNDD1Q9H9R9 158 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 DUOX1Q9NRD9 1551 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 LRRC37AA6NMS7 1700 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 ZC3H15Q8WU90 426 aaKnown RBP24.6■■□□□ 1.53
SMN1-211ENST00000625245 PGAP2Q9UHJ9 254 aa24.6■■□□□ 1.53
SMN1-211ENST00000625245 ZBTB12Q9Y330 459 aaPredicted RBP24.6■■□□□ 1.53
SMN1-211ENST00000625245 ELL2O00472 640 aaPredicted RBP24.59■■□□□ 1.53
SMN1-211ENST00000625245 AOC2O75106 756 aa24.59■■□□□ 1.53
SMN1-211ENST00000625245 GPSM2P81274 684 aa24.59■■□□□ 1.53
SMN1-211ENST00000625245 GOLGA2Q08379 1002 aa24.59■■□□□ 1.53
SMN1-211ENST00000625245 MICALL2Q8IY33 904 aa24.59■■□□□ 1.53
SMN1-211ENST00000625245 PSMD14O00487 310 aa24.58■■□□□ 1.53
SMN1-211ENST00000625245 APAF1O14727 1248 aa24.58■■□□□ 1.53
SMN1-211ENST00000625245 TRIM28Q13263 835 aaKnown RBP24.58■■□□□ 1.53
SMN1-211ENST00000625245 CDC37L1Q7L3B6 337 aa24.58■■□□□ 1.53
SMN1-211ENST00000625245 SAPCD2Q86UD0 394 aa24.58■■□□□ 1.53
SMN1-211ENST00000625245 POLLQ9UGP5 575 aa24.58■■□□□ 1.53
SMN1-211ENST00000625245 RPS8P62241 208 aaKnown RBP24.57■■□□□ 1.52
SMN1-211ENST00000625245 DOK7Q18PE1 504 aa24.57■■□□□ 1.52
SMN1-211ENST00000625245 PHAXQ9H814 394 aaKnown RBP24.57■■□□□ 1.52
SMN1-211ENST00000625245 ZNF853P0CG23 659 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 SAMD7Q7Z3H4 446 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 USP48Q86UV5 1035 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 EYA3Q99504 573 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 PRKRIP1Q9H875 184 aaPredicted RBP24.56■■□□□ 1.52
SMN1-211ENST00000625245 IFT57Q9NWB7 429 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 THSD7BQ9C0I4 1608 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 POLR2AP24928 1970 aaKnown RBP24.56■■□□□ 1.52
SMN1-211ENST00000625245 COL4A1P02462 1669 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 MAP2K2P36507 400 aa24.55■■□□□ 1.52
SMN1-211ENST00000625245 GNAI1P63096 354 aa24.55■■□□□ 1.52
SMN1-211ENST00000625245 ZBTB38Q8NAP3 1195 aaPredicted RBP24.55■■□□□ 1.52
SMN1-211ENST00000625245 DPF2Q92785 391 aa24.55■■□□□ 1.52
SMN1-211ENST00000625245 MYD88Q99836 296 aa24.55■■□□□ 1.52
SMN1-211ENST00000625245 TSKSQ9UJT2 592 aa24.55■■□□□ 1.52
SMN1-211ENST00000625245 ECE2O60344 883 aa24.54■■□□□ 1.52
SMN1-211ENST00000625245 CALD1Q05682 793 aaKnown RBP24.54■■□□□ 1.52
SMN1-211ENST00000625245 TBC1D10BQ4KMP7 808 aaPredicted RBP24.54■■□□□ 1.52
SMN1-211ENST00000625245 RBM26Q5T8P6 1007 aaKnown RBP24.54■■□□□ 1.52
SMN1-211ENST00000625245 TBC1D16Q8TBP0 767 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms