RNA–Protein interactions for RNA: ENST00000625044.1

PCDHB16-202, Transcript of protocadherin beta 16, humanhuman

TSL 2

Gene PCDHB16, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-202ENST00000625044 ZNF277Q9NRM2 450 aaPredicted RBP25.65■■□□□ 1.7
PCDHB16-202ENST00000625044 H7C1W4 665 aa25.64■■□□□ 1.7
PCDHB16-202ENST00000625044 CT47B1P0C2W7 299 aaPredicted RBP25.64■■□□□ 1.7
PCDHB16-202ENST00000625044 GRIPAP1Q4V328 841 aa25.64■■□□□ 1.7
PCDHB16-202ENST00000625044 UBE3BQ7Z3V4 1068 aa25.64■■□□□ 1.7
PCDHB16-202ENST00000625044 PSMD1Q99460 953 aa25.64■■□□□ 1.7
PCDHB16-202ENST00000625044 BCL2L13Q9BXK5 485 aa25.64■■□□□ 1.7
PCDHB16-202ENST00000625044 CCDC88AQ3V6T2 1871 aa25.64■■□□□ 1.69
PCDHB16-202ENST00000625044 ALDH1L2Q3SY69 923 aa25.63■■□□□ 1.69
PCDHB16-202ENST00000625044 CELF1Q92879 486 aaKnown RBP25.63■■□□□ 1.69
PCDHB16-202ENST00000625044 SP8Q8IXZ3 490 aa25.62■■□□□ 1.69
PCDHB16-202ENST00000625044 TAF1P21675 1872 aa25.62■■□□□ 1.69
PCDHB16-202ENST00000625044 COL4A1P02462 1669 aa25.61■■□□□ 1.69
PCDHB16-202ENST00000625044 TIAM2Q8IVF5 1701 aa25.61■■□□□ 1.69
PCDHB16-202ENST00000625044 CASP7P55210 303 aa25.61■■□□□ 1.69
PCDHB16-202ENST00000625044 CCDC152Q4G0S7 254 aa25.61■■□□□ 1.69
PCDHB16-202ENST00000625044 TMX4Q9H1E5 349 aaPredicted RBP25.61■■□□□ 1.69
PCDHB16-202ENST00000625044 CTSWP56202 376 aa25.6■■□□□ 1.69
PCDHB16-202ENST00000625044 TMC4Q7Z404 712 aa25.6■■□□□ 1.69
PCDHB16-202ENST00000625044 SEC31BQ9NQW1 1179 aa25.6■■□□□ 1.69
PCDHB16-202ENST00000625044 SMC4Q9NTJ3 1288 aa25.6■■□□□ 1.69
PCDHB16-202ENST00000625044 PTPRCP08575 1304 aa25.6■■□□□ 1.69
PCDHB16-202ENST00000625044 DICER1Q9UPY3 1922 aaKnown RBP25.59■■□□□ 1.69
PCDHB16-202ENST00000625044 IARSP41252 1262 aaKnown RBP25.59■■□□□ 1.69
PCDHB16-202ENST00000625044 SLC4A10Q6U841 1118 aa25.59■■□□□ 1.69
PCDHB16-202ENST00000625044 CCDC85AQ96PX6 553 aaPredicted RBP25.59■■□□□ 1.69
PCDHB16-202ENST00000625044 NMRK2Q9NPI5 230 aa25.59■■□□□ 1.69
PCDHB16-202ENST00000625044 KDM2BQ8NHM5 1336 aa25.59■■□□□ 1.69
PCDHB16-202ENST00000625044 GLTPD2A6NH11 291 aa25.58■■□□□ 1.69
PCDHB16-202ENST00000625044 RPS8P62241 208 aaKnown RBP25.58■■□□□ 1.69
PCDHB16-202ENST00000625044 TTLL11Q8NHH1 800 aa25.58■■□□□ 1.69
PCDHB16-202ENST00000625044 KIF3CO14782 793 aa25.57■■□□□ 1.68
PCDHB16-202ENST00000625044 PLA2G12BQ9BX93 195 aa25.57■■□□□ 1.68
PCDHB16-202ENST00000625044 ALDH1L1O75891 902 aa25.56■■□□□ 1.68
PCDHB16-202ENST00000625044 RTFDC1Q9BY42 306 aaPredicted RBP25.56■■□□□ 1.68
PCDHB16-202ENST00000625044 SRCIN1Q9C0H9 1055 aa25.56■■□□□ 1.68
PCDHB16-202ENST00000625044 LRRC37AA6NMS7 1700 aa25.55■■□□□ 1.68
PCDHB16-202ENST00000625044 RARSP54136 660 aaKnown RBP25.55■■□□□ 1.68
PCDHB16-202ENST00000625044 DPP8Q6V1X1 898 aaPredicted RBP25.55■■□□□ 1.68
PCDHB16-202ENST00000625044 MPNDQ8N594 471 aa25.55■■□□□ 1.68
PCDHB16-202ENST00000625044 GREM2Q9H772 168 aa25.55■■□□□ 1.68
PCDHB16-202ENST00000625044 GRM8O00222 908 aa25.54■■□□□ 1.68
PCDHB16-202ENST00000625044 ZBED9Q6R2W3 1325 aa25.54■■□□□ 1.68
PCDHB16-202ENST00000625044 RTL9Q8NET4 1388 aa25.54■■□□□ 1.68
PCDHB16-202ENST00000625044 COL4A5P29400 1685 aa25.53■■□□□ 1.68
PCDHB16-202ENST00000625044 BRPF1P55201 1214 aaPredicted RBP25.53■■□□□ 1.68
PCDHB16-202ENST00000625044 DPY19L2Q6NUT2 758 aa25.53■■□□□ 1.68
PCDHB16-202ENST00000625044 SUPT20HQ8NEM7 779 aa25.52■■□□□ 1.68
PCDHB16-202ENST00000625044 RRAGCQ9HB90 399 aa25.52■■□□□ 1.68
PCDHB16-202ENST00000625044 FZD9O00144 591 aa25.51■■□□□ 1.67
PCDHB16-202ENST00000625044 CSF1RP07333 972 aa25.51■■□□□ 1.67
PCDHB16-202ENST00000625044 ANKRD18AQ8IVF6 992 aa25.51■■□□□ 1.67
PCDHB16-202ENST00000625044 LARGE2Q8N3Y3 721 aa25.51■■□□□ 1.67
PCDHB16-202ENST00000625044 JDP2Q8WYK2 163 aa25.51■■□□□ 1.67
PCDHB16-202ENST00000625044 VPS33BQ9H267 617 aa25.51■■□□□ 1.67
PCDHB16-202ENST00000625044 C9orf78Q9NZ63 289 aaPredicted RBP25.51■■□□□ 1.67
PCDHB16-202ENST00000625044 NSFL1CQ9UNZ2 370 aaKnown RBP25.51■■□□□ 1.67
PCDHB16-202ENST00000625044 DUOX1Q9NRD9 1551 aa25.51■■□□□ 1.67
PCDHB16-202ENST00000625044 MYH3P11055 1940 aa25.51■■□□□ 1.67
PCDHB16-202ENST00000625044 PPIP5K2O43314 1243 aa25.5■■□□□ 1.67
PCDHB16-202ENST00000625044 C1QTNF8P60827 252 aa25.5■■□□□ 1.67
PCDHB16-202ENST00000625044 GPSM2P81274 684 aa25.5■■□□□ 1.67
PCDHB16-202ENST00000625044 FOXO4P98177 505 aa25.5■■□□□ 1.67
PCDHB16-202ENST00000625044 AOC3Q16853 763 aa25.5■■□□□ 1.67
PCDHB16-202ENST00000625044 CDC5LQ99459 802 aaKnown RBP25.5■■□□□ 1.67
PCDHB16-202ENST00000625044 ZNF541Q9H0D2 1346 aa25.5■■□□□ 1.67
PCDHB16-202ENST00000625044 NOB1Q9ULX3 412 aaKnown RBP25.5■■□□□ 1.67
PCDHB16-202ENST00000625044 DDNO94850 711 aaPredicted RBP25.49■■□□□ 1.67
PCDHB16-202ENST00000625044 FAM161AQ3B820 660 aa25.49■■□□□ 1.67
PCDHB16-202ENST00000625044 UTYO14607 1347 aa25.47■■□□□ 1.67
PCDHB16-202ENST00000625044 ITGA6P23229 1130 aa25.47■■□□□ 1.67
PCDHB16-202ENST00000625044 KIAA2012Q0VF49 1180 aa25.47■■□□□ 1.67
PCDHB16-202ENST00000625044 EPHA10Q5JZY3 1008 aa25.47■■□□□ 1.67
PCDHB16-202ENST00000625044 POLLQ9UGP5 575 aa25.47■■□□□ 1.67
PCDHB16-202ENST00000625044 LTBP1Q14766 1721 aa25.46■■□□□ 1.67
PCDHB16-202ENST00000625044 POTECB2RU33 542 aa25.46■■□□□ 1.67
PCDHB16-202ENST00000625044 NBPF7P0C2Y1 421 aaPredicted RBP25.46■■□□□ 1.67
PCDHB16-202ENST00000625044 VEGFAP15692 232 aaPredicted RBP25.46■■□□□ 1.67
PCDHB16-202ENST00000625044 NIM1KQ8IY84 436 aa25.46■■□□□ 1.67
PCDHB16-202ENST00000625044 BSDC1Q9NW68 430 aaPredicted RBP25.46■■□□□ 1.67
PCDHB16-202ENST00000625044 PODXL2Q9NZ53 605 aa25.46■■□□□ 1.67
PCDHB16-202ENST00000625044 WDR90Q96KV7 1748 aa25.45■■□□□ 1.66
PCDHB16-202ENST00000625044 KIF16BQ96L93 1317 aa25.44■■□□□ 1.66
PCDHB16-202ENST00000625044 C6orf229H3BNL8 230 aa25.44■■□□□ 1.66
PCDHB16-202ENST00000625044 TOMM70O94826 608 aa25.44■■□□□ 1.66
PCDHB16-202ENST00000625044 LMBR1LQ6UX01 489 aa25.44■■□□□ 1.66
PCDHB16-202ENST00000625044 TBC1D16Q8TBP0 767 aa25.44■■□□□ 1.66
PCDHB16-202ENST00000625044 KAZALD1Q96I82 304 aa25.44■■□□□ 1.66
PCDHB16-202ENST00000625044 SUCLG2Q96I99 432 aa25.44■■□□□ 1.66
PCDHB16-202ENST00000625044 API5Q9BZZ5 524 aaKnown RBP25.44■■□□□ 1.66
PCDHB16-202ENST00000625044 ANKIB1Q9P2G1 1089 aa25.44■■□□□ 1.66
PCDHB16-202ENST00000625044 L3MBTL3Q96JM7 780 aaPredicted RBP25.43■■□□□ 1.66
PCDHB16-202ENST00000625044 USP44Q9H0E7 712 aa25.43■■□□□ 1.66
PCDHB16-202ENST00000625044 BCAR3O75815 825 aa25.42■■□□□ 1.66
PCDHB16-202ENST00000625044 EIF6P56537 245 aaKnown RBP25.42■■□□□ 1.66
PCDHB16-202ENST00000625044 WASHC4Q2M389 1173 aa25.42■■□□□ 1.66
PCDHB16-202ENST00000625044 GPC2Q8N158 579 aa25.42■■□□□ 1.66
PCDHB16-202ENST00000625044 ARHGAP45Q92619 1136 aa25.42■■□□□ 1.66
PCDHB16-202ENST00000625044 ZNRF3Q9ULT6 936 aa25.42■■□□□ 1.66
PCDHB16-202ENST00000625044 MINPP1Q9UNW1 487 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms