RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 VEGFAP15692 232 aaPredicted RBP15.91■□□□□ 0.14
LINC00963-217ENST00000624009 IARSP41252 1262 aaKnown RBP15.91■□□□□ 0.14
LINC00963-217ENST00000624009 SUPT20HQ8NEM7 779 aa15.91■□□□□ 0.14
LINC00963-217ENST00000624009 IGKV5-2P06315 115 aa15.9■□□□□ 0.14
LINC00963-217ENST00000624009 OLFM4Q6UX06 510 aa15.9■□□□□ 0.14
LINC00963-217ENST00000624009 L3MBTL3Q96JM7 780 aaPredicted RBP15.9■□□□□ 0.14
LINC00963-217ENST00000624009 ZNF277Q9NRM2 450 aaPredicted RBP15.9■□□□□ 0.14
LINC00963-217ENST00000624009 NEURL1BA8MQ27 555 aa15.89■□□□□ 0.13
LINC00963-217ENST00000624009 FZD9O00144 591 aa15.89■□□□□ 0.13
LINC00963-217ENST00000624009 PDE8AO60658 829 aa15.89■□□□□ 0.13
LINC00963-217ENST00000624009 FKBP5Q13451 457 aaPredicted RBP15.89■□□□□ 0.13
LINC00963-217ENST00000624009 G2E3Q7L622 706 aa15.89■□□□□ 0.13
LINC00963-217ENST00000624009 LINS1Q8NG48 757 aa15.89■□□□□ 0.13
LINC00963-217ENST00000624009 DNAAF4Q8WXU2 420 aa15.89■□□□□ 0.13
LINC00963-217ENST00000624009 JDP2Q8WYK2 163 aa15.89■□□□□ 0.13
LINC00963-217ENST00000624009 CT47B1P0C2W7 299 aaPredicted RBP15.88■□□□□ 0.13
LINC00963-217ENST00000624009 FSTL1Q12841 308 aa15.88■□□□□ 0.13
LINC00963-217ENST00000624009 CCDC152Q4G0S7 254 aa15.88■□□□□ 0.13
LINC00963-217ENST00000624009 C16orf71Q8IYS4 520 aaPredicted RBP15.88■□□□□ 0.13
LINC00963-217ENST00000624009 RRAGCQ9HB90 399 aa15.88■□□□□ 0.13
LINC00963-217ENST00000624009 LTBP1Q14766 1721 aa15.88■□□□□ 0.13
LINC00963-217ENST00000624009 RTL9Q8NET4 1388 aa15.87■□□□□ 0.13
LINC00963-217ENST00000624009 IQCA1LA6NCM1 817 aa15.87■□□□□ 0.13
LINC00963-217ENST00000624009 H7C1W4 665 aa15.87■□□□□ 0.13
LINC00963-217ENST00000624009 SLFN5Q08AF3 891 aa15.87■□□□□ 0.13
LINC00963-217ENST00000624009 PLA2G12BQ9BX93 195 aa15.87■□□□□ 0.13
LINC00963-217ENST00000624009 TCERG1O14776 1098 aaKnown RBP15.86■□□□□ 0.13
LINC00963-217ENST00000624009 RPS8P62241 208 aaKnown RBP15.86■□□□□ 0.13
LINC00963-217ENST00000624009 GCKRQ14397 625 aa15.86■□□□□ 0.13
LINC00963-217ENST00000624009 DIEXFQ68CQ4 756 aaKnown RBP15.86■□□□□ 0.13
LINC00963-217ENST00000624009 DPP8Q6V1X1 898 aaPredicted RBP15.86■□□□□ 0.13
LINC00963-217ENST00000624009 TRMT2AQ8IZ69 625 aaKnown RBP15.86■□□□□ 0.13
LINC00963-217ENST00000624009 GPC2Q8N158 579 aa15.86■□□□□ 0.13
LINC00963-217ENST00000624009 MPNDQ8N594 471 aa15.86■□□□□ 0.13
LINC00963-217ENST00000624009 POTECB2RU33 542 aa15.85■□□□□ 0.13
LINC00963-217ENST00000624009 HSPA6P17066 643 aa15.85■□□□□ 0.13
LINC00963-217ENST00000624009 LARGE2Q8N3Y3 721 aa15.85■□□□□ 0.13
LINC00963-217ENST00000624009 DUOX1Q9NRD9 1551 aa15.84■□□□□ 0.13
LINC00963-217ENST00000624009 CTSWP56202 376 aa15.84■□□□□ 0.13
LINC00963-217ENST00000624009 KIAA2012Q0VF49 1180 aa15.84■□□□□ 0.13
LINC00963-217ENST00000624009 CWF19L2Q2TBE0 894 aaKnown RBP15.84■□□□□ 0.13
LINC00963-217ENST00000624009 RTL5Q5HYW3 569 aaPredicted RBP15.84■□□□□ 0.13
LINC00963-217ENST00000624009 SMC1BQ8NDV3 1235 aa15.84■□□□□ 0.13
LINC00963-217ENST00000624009 CELF1Q92879 486 aaKnown RBP15.84■□□□□ 0.13
LINC00963-217ENST00000624009 PODXL2Q9NZ53 605 aa15.84■□□□□ 0.13
LINC00963-217ENST00000624009 COL4A5P29400 1685 aa15.83■□□□□ 0.13
LINC00963-217ENST00000624009 PPIP5K2O43314 1243 aa15.83■□□□□ 0.12
LINC00963-217ENST00000624009 DDNO94850 711 aaPredicted RBP15.83■□□□□ 0.12
LINC00963-217ENST00000624009 EIF6P56537 245 aaKnown RBP15.83■□□□□ 0.12
LINC00963-217ENST00000624009 ALDH1L2Q3SY69 923 aa15.83■□□□□ 0.12
LINC00963-217ENST00000624009 BEND3Q5T5X7 828 aa15.83■□□□□ 0.12
LINC00963-217ENST00000624009 TTLL11Q8NHH1 800 aa15.83■□□□□ 0.12
LINC00963-217ENST00000624009 CDC5LQ99459 802 aaKnown RBP15.83■□□□□ 0.12
LINC00963-217ENST00000624009 PTPRCP08575 1304 aa15.83■□□□□ 0.12
LINC00963-217ENST00000624009 ALDH1L1O75891 902 aa15.82■□□□□ 0.12
LINC00963-217ENST00000624009 CASP7P55210 303 aa15.82■□□□□ 0.12
LINC00963-217ENST00000624009 UBE3BQ7Z3V4 1068 aa15.82■□□□□ 0.12
LINC00963-217ENST00000624009 NIM1KQ8IY84 436 aa15.82■□□□□ 0.12
LINC00963-217ENST00000624009 ZNF541Q9H0D2 1346 aa15.82■□□□□ 0.12
LINC00963-217ENST00000624009 APLP1P51693 650 aa15.81■□□□□ 0.12
LINC00963-217ENST00000624009 ZNRF3Q9ULT6 936 aa15.81■□□□□ 0.12
LINC00963-217ENST00000624009 ADAMTSL1Q8N6G6 1762 aa15.8■□□□□ 0.12
LINC00963-217ENST00000624009 COL4A1P02462 1669 aa15.8■□□□□ 0.12
LINC00963-217ENST00000624009 CSF1RP07333 972 aa15.8■□□□□ 0.12
LINC00963-217ENST00000624009 BRPF1P55201 1214 aaPredicted RBP15.8■□□□□ 0.12
LINC00963-217ENST00000624009 ANKRD18AQ8IVF6 992 aa15.8■□□□□ 0.12
LINC00963-217ENST00000624009 EYA3Q99504 573 aa15.8■□□□□ 0.12
LINC00963-217ENST00000624009 BSDC1Q9NW68 430 aaPredicted RBP15.8■□□□□ 0.12
LINC00963-217ENST00000624009 PSME4Q14997 1843 aa15.8■□□□□ 0.12
LINC00963-217ENST00000624009 AOC3Q16853 763 aa15.79■□□□□ 0.12
LINC00963-217ENST00000624009 PNMA8AQ86V59 439 aaPredicted RBP15.79■□□□□ 0.12
LINC00963-217ENST00000624009 MRPL50Q8N5N7 158 aaKnown RBP15.79■□□□□ 0.12
LINC00963-217ENST00000624009 TAF1DQ9H5J8 278 aaPredicted RBP15.79■□□□□ 0.12
LINC00963-217ENST00000624009 SEC31BQ9NQW1 1179 aa15.79■□□□□ 0.12
LINC00963-217ENST00000624009 HACL1Q9UJ83 578 aa15.79■□□□□ 0.12
LINC00963-217ENST00000624009 NSFL1CQ9UNZ2 370 aaKnown RBP15.79■□□□□ 0.12
LINC00963-217ENST00000624009 SPEF2Q9C093 1822 aa15.79■□□□□ 0.12
LINC00963-217ENST00000624009 PCNTO95613 3336 aa15.78■□□□□ 0.12
LINC00963-217ENST00000624009 XDHP47989 1333 aa15.78■□□□□ 0.12
LINC00963-217ENST00000624009 F6X3S4 739 aa15.78■□□□□ 0.12
LINC00963-217ENST00000624009 WASHC4Q2M389 1173 aa15.78■□□□□ 0.12
LINC00963-217ENST00000624009 CDCA7LQ96GN5 454 aa15.78■□□□□ 0.12
LINC00963-217ENST00000624009 SRCIN1Q9C0H9 1055 aa15.78■□□□□ 0.12
LINC00963-217ENST00000624009 GRM8O00222 908 aa15.77■□□□□ 0.12
LINC00963-217ENST00000624009 GPSM2P81274 684 aa15.77■□□□□ 0.12
LINC00963-217ENST00000624009 TNIP1Q15025 636 aa15.77■□□□□ 0.12
LINC00963-217ENST00000624009 SLC51AQ86UW1 340 aa15.77■□□□□ 0.12
LINC00963-217ENST00000624009 LDHDQ86WU2 507 aa15.77■□□□□ 0.12
LINC00963-217ENST00000624009 MIER1Q8N108 512 aa15.77■□□□□ 0.12
LINC00963-217ENST00000624009 TBC1D16Q8TBP0 767 aa15.77■□□□□ 0.12
LINC00963-217ENST00000624009 SSH1Q8WYL5 1049 aa15.77■□□□□ 0.12
LINC00963-217ENST00000624009 JARID2Q92833 1246 aaPredicted RBP15.77■□□□□ 0.12
LINC00963-217ENST00000624009 GREM2Q9H772 168 aa15.77■□□□□ 0.12
LINC00963-217ENST00000624009 POLLQ9UGP5 575 aa15.77■□□□□ 0.12
LINC00963-217ENST00000624009 UTYO14607 1347 aa15.76■□□□□ 0.11
LINC00963-217ENST00000624009 CHADLQ6NUI6 762 aa15.76■□□□□ 0.11
LINC00963-217ENST00000624009 ANKIB1Q9P2G1 1089 aa15.76■□□□□ 0.11
LINC00963-217ENST00000624009 GGA1Q9UJY5 639 aa15.76■□□□□ 0.11
LINC00963-217ENST00000624009 SCN9AQ15858 1988 aa15.76■□□□□ 0.11
LINC00963-217ENST00000624009 ATP2B4P23634 1241 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms