RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 MYH16Q9H6N6 1097 aa26.85■■□□□ 1.89
PCDHB4-202ENST00000623478 ZNF521Q96K83 1311 aa26.85■■□□□ 1.89
PCDHB4-202ENST00000623478 FZD9O00144 591 aa26.84■■□□□ 1.89
PCDHB4-202ENST00000623478 IGKV5-2P06315 115 aa26.84■■□□□ 1.89
PCDHB4-202ENST00000623478 SP8Q8IXZ3 490 aa26.84■■□□□ 1.89
PCDHB4-202ENST00000623478 PCCAP05165 728 aaPredicted RBP26.83■■□□□ 1.89
PCDHB4-202ENST00000623478 FSTL1Q12841 308 aa26.83■■□□□ 1.89
PCDHB4-202ENST00000623478 FLIIQ13045 1269 aa26.83■■□□□ 1.89
PCDHB4-202ENST00000623478 JDP2Q8WYK2 163 aa26.83■■□□□ 1.89
PCDHB4-202ENST00000623478 CELF1Q92879 486 aaKnown RBP26.83■■□□□ 1.89
PCDHB4-202ENST00000623478 LRRC37AA6NMS7 1700 aa26.82■■□□□ 1.88
PCDHB4-202ENST00000623478 LARGE2Q8N3Y3 721 aa26.82■■□□□ 1.88
PCDHB4-202ENST00000623478 SMC1BQ8NDV3 1235 aa26.82■■□□□ 1.88
PCDHB4-202ENST00000623478 CWF19L2Q2TBE0 894 aaKnown RBP26.81■■□□□ 1.88
PCDHB4-202ENST00000623478 DPP8Q6V1X1 898 aaPredicted RBP26.81■■□□□ 1.88
PCDHB4-202ENST00000623478 L3MBTL3Q96JM7 780 aaPredicted RBP26.81■■□□□ 1.88
PCDHB4-202ENST00000623478 PPIP5K2O43314 1243 aa26.8■■□□□ 1.88
PCDHB4-202ENST00000623478 NEXNQ0ZGT2 675 aa26.8■■□□□ 1.88
PCDHB4-202ENST00000623478 FKBP5Q13451 457 aaPredicted RBP26.8■■□□□ 1.88
PCDHB4-202ENST00000623478 AOC3Q16853 763 aa26.8■■□□□ 1.88
PCDHB4-202ENST00000623478 MPNDQ8N594 471 aa26.8■■□□□ 1.88
PCDHB4-202ENST00000623478 DUOX1Q9NRD9 1551 aa26.8■■□□□ 1.88
PCDHB4-202ENST00000623478 RTFDC1Q9BY42 306 aaPredicted RBP26.79■■□□□ 1.88
PCDHB4-202ENST00000623478 NEURL1BA8MQ27 555 aa26.78■■□□□ 1.88
PCDHB4-202ENST00000623478 APLP1P51693 650 aa26.78■■□□□ 1.88
PCDHB4-202ENST00000623478 TMC4Q7Z404 712 aa26.78■■□□□ 1.88
PCDHB4-202ENST00000623478 CCDC85AQ96PX6 553 aaPredicted RBP26.78■■□□□ 1.88
PCDHB4-202ENST00000623478 SEC31BQ9NQW1 1179 aa26.78■■□□□ 1.88
PCDHB4-202ENST00000623478 PDE8AO60658 829 aa26.77■■□□□ 1.88
PCDHB4-202ENST00000623478 POTEIP0CG38 1075 aa26.77■■□□□ 1.88
PCDHB4-202ENST00000623478 POTEJP0CG39 1038 aa26.77■■□□□ 1.88
PCDHB4-202ENST00000623478 HSP90B1P14625 803 aaKnown RBP26.77■■□□□ 1.88
PCDHB4-202ENST00000623478 NIM1KQ8IY84 436 aa26.77■■□□□ 1.88
PCDHB4-202ENST00000623478 SUPT20HQ8NEM7 779 aa26.77■■□□□ 1.88
PCDHB4-202ENST00000623478 CDHR2Q9BYE9 1310 aa26.76■■□□□ 1.87
PCDHB4-202ENST00000623478 IQCA1LA6NCM1 817 aa26.76■■□□□ 1.87
PCDHB4-202ENST00000623478 GPC2Q8N158 579 aa26.76■■□□□ 1.87
PCDHB4-202ENST00000623478 CACNA1FO60840 1977 aa26.76■■□□□ 1.87
PCDHB4-202ENST00000623478 SCN4AP35499 1836 aa26.76■■□□□ 1.87
PCDHB4-202ENST00000623478 EIF6P56537 245 aaKnown RBP26.75■■□□□ 1.87
PCDHB4-202ENST00000623478 DNAAF4Q8WXU2 420 aa26.75■■□□□ 1.87
PCDHB4-202ENST00000623478 TAF1DQ9H5J8 278 aaPredicted RBP26.75■■□□□ 1.87
PCDHB4-202ENST00000623478 GJA3Q9Y6H8 435 aa26.75■■□□□ 1.87
PCDHB4-202ENST00000623478 CCER2I3L3R5 266 aa26.74■■□□□ 1.87
PCDHB4-202ENST00000623478 RPS8P62241 208 aaKnown RBP26.74■■□□□ 1.87
PCDHB4-202ENST00000623478 CCDC152Q4G0S7 254 aa26.74■■□□□ 1.87
PCDHB4-202ENST00000623478 HTRA3P83110 453 aa26.73■■□□□ 1.87
PCDHB4-202ENST00000623478 VPS33BQ9H267 617 aa26.73■■□□□ 1.87
PCDHB4-202ENST00000623478 NSFL1CQ9UNZ2 370 aaKnown RBP26.73■■□□□ 1.87
PCDHB4-202ENST00000623478 LTBP1Q14766 1721 aa26.73■■□□□ 1.87
PCDHB4-202ENST00000623478 CTSWP56202 376 aa26.72■■□□□ 1.87
PCDHB4-202ENST00000623478 GPSM2P81274 684 aa26.72■■□□□ 1.87
PCDHB4-202ENST00000623478 KIAA2012Q0VF49 1180 aa26.72■■□□□ 1.87
PCDHB4-202ENST00000623478 GCKRQ14397 625 aa26.72■■□□□ 1.87
PCDHB4-202ENST00000623478 UBE3BQ7Z3V4 1068 aa26.72■■□□□ 1.87
PCDHB4-202ENST00000623478 HACL1Q9UJ83 578 aa26.72■■□□□ 1.87
PCDHB4-202ENST00000623478 F6X3S4 739 aa26.71■■□□□ 1.87
PCDHB4-202ENST00000623478 H7C1W4 665 aa26.7■■□□□ 1.86
PCDHB4-202ENST00000623478 EPHX2P34913 555 aa26.7■■□□□ 1.86
PCDHB4-202ENST00000623478 LINS1Q8NG48 757 aa26.7■■□□□ 1.86
PCDHB4-202ENST00000623478 ZNRF3Q9ULT6 936 aa26.7■■□□□ 1.86
PCDHB4-202ENST00000623478 EAPPQ56P03 285 aaPredicted RBP26.69■■□□□ 1.86
PCDHB4-202ENST00000623478 CHADLQ6NUI6 762 aa26.69■■□□□ 1.86
PCDHB4-202ENST00000623478 POLLQ9UGP5 575 aa26.69■■□□□ 1.86
PCDHB4-202ENST00000623478 MYH3P11055 1940 aa26.69■■□□□ 1.86
PCDHB4-202ENST00000623478 E9PSI1 815 aa26.68■■□□□ 1.86
PCDHB4-202ENST00000623478 TTLL11Q8NHH1 800 aa26.68■■□□□ 1.86
PCDHB4-202ENST00000623478 GPR101Q96P66 508 aaPredicted RBP26.68■■□□□ 1.86
PCDHB4-202ENST00000623478 GREM2Q9H772 168 aa26.68■■□□□ 1.86
PCDHB4-202ENST00000623478 C6orf229H3BNL8 230 aa26.67■■□□□ 1.86
PCDHB4-202ENST00000623478 SCNN1DP51172 638 aa26.67■■□□□ 1.86
PCDHB4-202ENST00000623478 CASP7P55210 303 aa26.67■■□□□ 1.86
PCDHB4-202ENST00000623478 CXCL9Q07325 125 aa26.67■■□□□ 1.86
PCDHB4-202ENST00000623478 LDHDQ86WU2 507 aa26.67■■□□□ 1.86
PCDHB4-202ENST00000623478 ADAMTSL1Q8N6G6 1762 aa26.66■■□□□ 1.86
PCDHB4-202ENST00000623478 WASHC4Q2M389 1173 aa26.66■■□□□ 1.86
PCDHB4-202ENST00000623478 DNAJC5GQ8N7S2 189 aa26.66■■□□□ 1.86
PCDHB4-202ENST00000623478 CDCA7LQ96GN5 454 aa26.66■■□□□ 1.86
PCDHB4-202ENST00000623478 YDJCA8MPS7 323 aa26.65■■□□□ 1.86
PCDHB4-202ENST00000623478 RIMBP2O15034 1052 aa26.65■■□□□ 1.86
PCDHB4-202ENST00000623478 SLFN5Q08AF3 891 aa26.65■■□□□ 1.86
PCDHB4-202ENST00000623478 BEND3Q5T5X7 828 aa26.65■■□□□ 1.86
PCDHB4-202ENST00000623478 ANKRD18AQ8IVF6 992 aa26.65■■□□□ 1.86
PCDHB4-202ENST00000623478 TBC1D16Q8TBP0 767 aa26.65■■□□□ 1.86
PCDHB4-202ENST00000623478 RTL9Q8NET4 1388 aa26.64■■□□□ 1.86
PCDHB4-202ENST00000623478 RAD17O75943 681 aa26.64■■□□□ 1.86
PCDHB4-202ENST00000623478 LMOD1P29536 600 aaPredicted RBP26.64■■□□□ 1.86
PCDHB4-202ENST00000623478 EPS15P42566 896 aa26.64■■□□□ 1.86
PCDHB4-202ENST00000623478 SPEF2Q9C093 1822 aa26.64■■□□□ 1.85
PCDHB4-202ENST00000623478 CDC5LQ99459 802 aaKnown RBP26.63■■□□□ 1.85
PCDHB4-202ENST00000623478 PLA2G12BQ9BX93 195 aa26.63■■□□□ 1.85
PCDHB4-202ENST00000623478 PODXL2Q9NZ53 605 aa26.63■■□□□ 1.85
PCDHB4-202ENST00000623478 ANKIB1Q9P2G1 1089 aa26.63■■□□□ 1.85
PCDHB4-202ENST00000623478 UFL1O94874 794 aa26.62■■□□□ 1.85
PCDHB4-202ENST00000623478 PNMA8AQ86V59 439 aaPredicted RBP26.62■■□□□ 1.85
PCDHB4-202ENST00000623478 DBNDD1Q9H9R9 158 aa26.62■■□□□ 1.85
PCDHB4-202ENST00000623478 GMPSP49915 693 aaPredicted RBP26.61■■□□□ 1.85
PCDHB4-202ENST00000623478 FAM161AQ3B820 660 aa26.61■■□□□ 1.85
PCDHB4-202ENST00000623478 CIAPIN1Q6FI81 312 aa26.61■■□□□ 1.85
PCDHB4-202ENST00000623478 CLEC11AQ9Y240 323 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms