RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 IRS4O14654 1257 aaPredicted RBP13.11□□□□□ -0.31
PCDHGC3-207ENST00000622656 IGKV5-2P06315 115 aa13.11□□□□□ -0.31
PCDHGC3-207ENST00000622656 SF3B3Q15393 1217 aaKnown RBP13.11□□□□□ -0.31
PCDHGC3-207ENST00000622656 DDX46Q7L014 1031 aaKnown RBP13.11□□□□□ -0.31
PCDHGC3-207ENST00000622656 SP8Q8IXZ3 490 aa13.11□□□□□ -0.31
PCDHGC3-207ENST00000622656 LARGE2Q8N3Y3 721 aa13.11□□□□□ -0.31
PCDHGC3-207ENST00000622656 METTL22Q9BUU2 404 aaPredicted RBP13.11□□□□□ -0.31
PCDHGC3-207ENST00000622656 MAP3K2Q9Y2U5 619 aa13.11□□□□□ -0.31
PCDHGC3-207ENST00000622656 PI4KAP2A4QPH2 592 aa13.1□□□□□ -0.31
PCDHGC3-207ENST00000622656 PPIP5K2O43314 1243 aa13.1□□□□□ -0.31
PCDHGC3-207ENST00000622656 BBOX1O75936 387 aa13.1□□□□□ -0.31
PCDHGC3-207ENST00000622656 EXOSC9Q06265 439 aaKnown RBP13.1□□□□□ -0.31
PCDHGC3-207ENST00000622656 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
PCDHGC3-207ENST00000622656 PI4KAP1Q8N8J0 262 aa13.1□□□□□ -0.31
PCDHGC3-207ENST00000622656 ZBTB38Q8NAP3 1195 aaPredicted RBP13.1□□□□□ -0.31
PCDHGC3-207ENST00000622656 SEC31BQ9NQW1 1179 aa13.1□□□□□ -0.31
PCDHGC3-207ENST00000622656 GJA3Q9Y6H8 435 aa13.1□□□□□ -0.31
PCDHGC3-207ENST00000622656 VAMP4O75379 141 aa13.09□□□□□ -0.31
PCDHGC3-207ENST00000622656 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
PCDHGC3-207ENST00000622656 KSR2Q6VAB6 950 aa13.09□□□□□ -0.31
PCDHGC3-207ENST00000622656 MPNDQ8N594 471 aa13.09□□□□□ -0.31
PCDHGC3-207ENST00000622656 JDP2Q8WYK2 163 aa13.09□□□□□ -0.31
PCDHGC3-207ENST00000622656 CCDC85AQ96PX6 553 aaPredicted RBP13.09□□□□□ -0.31
PCDHGC3-207ENST00000622656 RTFDC1Q9BY42 306 aaPredicted RBP13.09□□□□□ -0.31
PCDHGC3-207ENST00000622656 PCCAP05165 728 aaPredicted RBP13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 EPS15P42566 896 aa13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 SCNN1DP51172 638 aa13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 CWF19L2Q2TBE0 894 aaKnown RBP13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 EAPPQ56P03 285 aaPredicted RBP13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 DPP8Q6V1X1 898 aaPredicted RBP13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 WDR63Q8IWG1 891 aa13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 GPC2Q8N158 579 aa13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 CCDC191Q8NCU4 936 aa13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 GPR101Q96P66 508 aaPredicted RBP13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 CWC25Q9NXE8 425 aaPredicted RBP13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 SCN9AQ15858 1988 aa13.08□□□□□ -0.32
PCDHGC3-207ENST00000622656 YDJCA8MPS7 323 aa13.07□□□□□ -0.32
PCDHGC3-207ENST00000622656 EPHX2P34913 555 aa13.07□□□□□ -0.32
PCDHGC3-207ENST00000622656 EIF6P56537 245 aaKnown RBP13.07□□□□□ -0.32
PCDHGC3-207ENST00000622656 GPSM2P81274 684 aa13.07□□□□□ -0.32
PCDHGC3-207ENST00000622656 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
PCDHGC3-207ENST00000622656 NIM1KQ8IY84 436 aa13.07□□□□□ -0.32
PCDHGC3-207ENST00000622656 STK31Q9BXU1 1019 aa13.07□□□□□ -0.32
PCDHGC3-207ENST00000622656 HACL1Q9UJ83 578 aa13.07□□□□□ -0.32
PCDHGC3-207ENST00000622656 IQCA1LA6NCM1 817 aa13.06□□□□□ -0.32
PCDHGC3-207ENST00000622656 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
PCDHGC3-207ENST00000622656 CXCL9Q07325 125 aa13.06□□□□□ -0.32
PCDHGC3-207ENST00000622656 KIAA2012Q0VF49 1180 aa13.06□□□□□ -0.32
PCDHGC3-207ENST00000622656 KLRG1Q96E93 195 aa13.06□□□□□ -0.32
PCDHGC3-207ENST00000622656 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
PCDHGC3-207ENST00000622656 ZNF521Q96K83 1311 aa13.06□□□□□ -0.32
PCDHGC3-207ENST00000622656 WTIPA6NIX2 430 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-207ENST00000622656 NEURL1BA8MQ27 555 aa13.05□□□□□ -0.32
PCDHGC3-207ENST00000622656 PDE8AO60658 829 aa13.05□□□□□ -0.32
PCDHGC3-207ENST00000622656 ITGBL1O95965 494 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-207ENST00000622656 RPS8P62241 208 aaKnown RBP13.05□□□□□ -0.32
PCDHGC3-207ENST00000622656 FMR1Q06787 632 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCDHGC3-207ENST00000622656 FLIIQ13045 1269 aa13.05□□□□□ -0.32
PCDHGC3-207ENST00000622656 LDHDQ86WU2 507 aa13.05□□□□□ -0.32
PCDHGC3-207ENST00000622656 NSFL1CQ9UNZ2 370 aaKnown RBP13.05□□□□□ -0.32
PCDHGC3-207ENST00000622656 PASKQ96RG2 1323 aa13.05□□□□□ -0.32
PCDHGC3-207ENST00000622656 SHTN1A0MZ66 631 aa13.04□□□□□ -0.32
PCDHGC3-207ENST00000622656 RIMBP2O15034 1052 aa13.04□□□□□ -0.32
PCDHGC3-207ENST00000622656 RAD17O75943 681 aa13.04□□□□□ -0.32
PCDHGC3-207ENST00000622656 MAP1SQ66K74 1059 aaPredicted RBP13.04□□□□□ -0.32
PCDHGC3-207ENST00000622656 SUPT20HQ8NEM7 779 aa13.04□□□□□ -0.32
PCDHGC3-207ENST00000622656 TMX4Q9H1E5 349 aaPredicted RBP13.04□□□□□ -0.32
PCDHGC3-207ENST00000622656 KCNQ5Q9NR82 932 aa13.04□□□□□ -0.32
PCDHGC3-207ENST00000622656 ZNRF3Q9ULT6 936 aa13.04□□□□□ -0.32
PCDHGC3-207ENST00000622656 CDHR2Q9BYE9 1310 aa13.04□□□□□ -0.32
PCDHGC3-207ENST00000622656 POLR2AP24928 1970 aaKnown RBP13.03□□□□□ -0.32
PCDHGC3-207ENST00000622656 F6X3S4 739 aa13.03□□□□□ -0.32
PCDHGC3-207ENST00000622656 H7C1W4 665 aa13.03□□□□□ -0.32
PCDHGC3-207ENST00000622656 CASP7P55210 303 aa13.03□□□□□ -0.32
PCDHGC3-207ENST00000622656 FKBP5Q13451 457 aaPredicted RBP13.03□□□□□ -0.32
PCDHGC3-207ENST00000622656 JMYQ8N9B5 988 aa13.03□□□□□ -0.32
PCDHGC3-207ENST00000622656 VPS33BQ9H267 617 aa13.03□□□□□ -0.32
PCDHGC3-207ENST00000622656 DBNDD1Q9H9R9 158 aa13.03□□□□□ -0.32
PCDHGC3-207ENST00000622656 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
PCDHGC3-207ENST00000622656 ZNF646O15015 1829 aaPredicted RBP13.02□□□□□ -0.32
PCDHGC3-207ENST00000622656 PSME4Q14997 1843 aa13.02□□□□□ -0.32
PCDHGC3-207ENST00000622656 TRPM7Q96QT4 1865 aa13.02□□□□□ -0.32
PCDHGC3-207ENST00000622656 C6orf229H3BNL8 230 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 GMPSP49915 693 aaPredicted RBP13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 CTSWP56202 376 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 DOK7Q18PE1 504 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 UBE3BQ7Z3V4 1068 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 TMC4Q7Z404 712 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 TTLL11Q8NHH1 800 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 TBC1D16Q8TBP0 767 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 DNAAF4Q8WXU2 420 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 CHMP4AQ9BY43 222 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 GREM2Q9H772 168 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 GPRC5DQ9NZD1 345 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 A0A1B0GUL6 1792 aa13.02□□□□□ -0.33
PCDHGC3-207ENST00000622656 NEXNQ0ZGT2 675 aa13.01□□□□□ -0.33
PCDHGC3-207ENST00000622656 GCKRQ14397 625 aa13.01□□□□□ -0.33
PCDHGC3-207ENST00000622656 WASHC4Q2M389 1173 aa13.01□□□□□ -0.33
PCDHGC3-207ENST00000622656 CCDC152Q4G0S7 254 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms