RNA–Protein interactions for RNA: ENST00000622457.1

LTBP4-238, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-238	ENST00000622457	SLC10A5	Q5PT55	438 aa		15.14	■□□□□ 0.01
LTBP4-238	ENST00000622457	SOGA3	Q5TF21	947 aa		15.14	■□□□□ 0.01
LTBP4-238	ENST00000622457	MAP1S	Q66K74	1059 aa	Predicted RBP	15.14	■□□□□ 0.01
LTBP4-238	ENST00000622457	ZNF622	Q969S3	477 aa	Known RBP eCLIP	15.14	■□□□□ 0.01
LTBP4-238	ENST00000622457	LRRC37A	A6NMS7	1700 aa		15.14	■□□□□ 0.01
LTBP4-238	ENST00000622457	EAPP	Q56P03	285 aa	Predicted RBP	15.13	■□□□□ 0.01
LTBP4-238	ENST00000622457	PRPF40B	Q6NWY9	871 aa	Known RBP	15.13	■□□□□ 0.01
LTBP4-238	ENST00000622457	SH3TC1	Q8TE82	1336 aa		15.13	■□□□□ 0.01
LTBP4-238	ENST00000622457	ZNF541	Q9H0D2	1346 aa		15.13	■□□□□ 0.01
LTBP4-238	ENST00000622457	LTBP3	Q9NS15	1303 aa		15.13	■□□□□ 0.01
LTBP4-238	ENST00000622457	AOC2	O75106	756 aa		15.12	■□□□□ 0.01
LTBP4-238	ENST00000622457	HOXA10	P31260	410 aa	Predicted RBP	15.12	■□□□□ 0.01
LTBP4-238	ENST00000622457	MAP2K1	Q02750	393 aa	Predicted RBP	15.12	■□□□□ 0.01
LTBP4-238	ENST00000622457	GRM1	Q13255	1194 aa		15.12	■□□□□ 0.01
LTBP4-238	ENST00000622457	CYP4F22	Q6NT55	531 aa		15.12	■□□□□ 0.01
LTBP4-238	ENST00000622457	RIC3	Q7Z5B4	369 aa		15.12	■□□□□ 0.01
LTBP4-238	ENST00000622457	MIER1	Q8N108	512 aa		15.12	■□□□□ 0.01
LTBP4-238	ENST00000622457	SNED1	Q8TER0	1413 aa		15.11	■□□□□ 0.01
LTBP4-238	ENST00000622457	ALDH1B1	P30837	517 aa		15.11	■□□□□ 0.01
LTBP4-238	ENST00000622457	METTL22	Q9BUU2	404 aa	Predicted RBP	15.11	■□□□□ 0.01
LTBP4-238	ENST00000622457	SLC4A2	P04920	1241 aa		15.1	■□□□□ 0.01
LTBP4-238	ENST00000622457	SOX10	P56693	466 aa		15.1	■□□□□ 0.01
LTBP4-238	ENST00000622457	FLII	Q13045	1269 aa		15.1	■□□□□ 0.01
LTBP4-238	ENST00000622457	KSR2	Q6VAB6	950 aa		15.1	■□□□□ 0.01
LTBP4-238	ENST00000622457	CCDC191	Q8NCU4	936 aa		15.1	■□□□□ 0.01
LTBP4-238	ENST00000622457	C7orf43	Q8WVR3	580 aa		15.1	■□□□□ 0.01
LTBP4-238	ENST00000622457	CAPNS2	Q96L46	248 aa		15.1	■□□□□ 0.01
LTBP4-238	ENST00000622457	NLRP3	Q96P20	1036 aa		15.1	■□□□□ 0.01
LTBP4-238	ENST00000622457	CRAMP1	Q96RY5	1269 aa		15.1	■□□□□ 0.01
LTBP4-238	ENST00000622457	TRMT112	Q9UI30	125 aa	Known RBP	15.1	■□□□□ 0.01
LTBP4-238	ENST00000622457	TAF1	P21675	1872 aa		15.1	■□□□□ 0.01
LTBP4-238	ENST00000622457	SLFN5	Q08AF3	891 aa		15.09	■□□□□ 0.01
LTBP4-238	ENST00000622457	CNTROB	Q8N137	903 aa		15.09	■□□□□ 0.01
LTBP4-238	ENST00000622457	RPGR	Q92834	1020 aa	Known RBP	15.09	■□□□□ 0.01
LTBP4-238	ENST00000622457	ZNF428	Q96B54	188 aa		15.09	■□□□□ 0.01
LTBP4-238	ENST00000622457	L3MBTL3	Q96JM7	780 aa	Predicted RBP	15.09	■□□□□ 0.01
LTBP4-238	ENST00000622457	ABT1	Q9ULW3	272 aa	Known RBP	15.09	■□□□□ 0.01
LTBP4-238	ENST00000622457	CLEC11A	Q9Y240	323 aa		15.09	■□□□□ 0.01
LTBP4-238	ENST00000622457	PI4KAP2	A4QPH2	592 aa		15.08	■□□□□ 0
LTBP4-238	ENST00000622457	ATP5J2-PTCD1	G3V325	749 aa		15.08	■□□□□ 0
LTBP4-238	ENST00000622457	HSP90B1	P14625	803 aa	Known RBP	15.08	■□□□□ 0
LTBP4-238	ENST00000622457	CCDC93	Q567U6	631 aa		15.08	■□□□□ 0
LTBP4-238	ENST00000622457	TRMT2A	Q8IZ69	625 aa	Known RBP	15.08	■□□□□ 0
LTBP4-238	ENST00000622457	PI4KAP1	Q8N8J0	262 aa		15.08	■□□□□ 0
LTBP4-238	ENST00000622457	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	15.08	■□□□□ 0
LTBP4-238	ENST00000622457	MAP3K2	Q9Y2U5	619 aa		15.08	■□□□□ 0
LTBP4-238	ENST00000622457	NEXN	Q0ZGT2	675 aa		15.07	■□□□□ 0
LTBP4-238	ENST00000622457	DGKZ	Q13574	1117 aa		15.07	■□□□□ 0
LTBP4-238	ENST00000622457	CC2D2B	Q6DHV5	1058 aa		15.07	■□□□□ 0
LTBP4-238	ENST00000622457	C3orf67	Q6ZVT6	689 aa		15.07	■□□□□ 0
LTBP4-238	ENST00000622457	G2E3	Q7L622	706 aa		15.07	■□□□□ 0
LTBP4-238	ENST00000622457	RBM17	Q96I25	401 aa	Known RBP	15.07	■□□□□ 0
LTBP4-238	ENST00000622457	MYD88	Q99836	296 aa		15.07	■□□□□ 0
LTBP4-238	ENST00000622457	CWC25	Q9NXE8	425 aa	Predicted RBP	15.07	■□□□□ 0
LTBP4-238	ENST00000622457	TCERG1	O14776	1098 aa	Known RBP	15.06	■□□□□ 0
LTBP4-238	ENST00000622457	PCCA	P05165	728 aa	Predicted RBP	15.06	■□□□□ 0
LTBP4-238	ENST00000622457	FKBP5	Q13451	457 aa	Predicted RBP	15.06	■□□□□ 0
LTBP4-238	ENST00000622457	GRIPAP1	Q4V328	841 aa		15.06	■□□□□ 0
LTBP4-238	ENST00000622457	OLFM4	Q6UX06	510 aa		15.06	■□□□□ 0
LTBP4-238	ENST00000622457	GPR101	Q96P66	508 aa	Predicted RBP	15.06	■□□□□ 0
LTBP4-238	ENST00000622457	TAOK3	Q9H2K8	898 aa		15.06	■□□□□ 0
LTBP4-238	ENST00000622457	CDHR2	Q9BYE9	1310 aa		15.06	■□□□□ 0
LTBP4-238	ENST00000622457	IGKV5-2	P06315	115 aa		15.05	■□□□□ -0
LTBP4-238	ENST00000622457	CT47B1	P0C2W7	299 aa	Predicted RBP	15.05	■□□□□ -0
LTBP4-238	ENST00000622457	HCLS1	P14317	486 aa	Predicted RBP	15.05	■□□□□ -0
LTBP4-238	ENST00000622457	EPHX2	P34913	555 aa		15.05	■□□□□ -0
LTBP4-238	ENST00000622457	SF3B3	Q15393	1217 aa	Known RBP	15.05	■□□□□ -0
LTBP4-238	ENST00000622457	CST9	Q5W186	159 aa		15.05	■□□□□ -0
LTBP4-238	ENST00000622457	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	15.05	■□□□□ -0
LTBP4-238	ENST00000622457	RTKN2	Q8IZC4	609 aa		15.05	■□□□□ -0
LTBP4-238	ENST00000622457	SYNE4	Q8N205	404 aa		15.05	■□□□□ -0
LTBP4-238	ENST00000622457	FAM89A	Q96GI7	184 aa		15.05	■□□□□ -0
LTBP4-238	ENST00000622457	ABCC4	O15439	1325 aa		15.05	■□□□□ -0
LTBP4-238	ENST00000622457	COL4A5	P29400	1685 aa		15.05	■□□□□ -0
LTBP4-238	ENST00000622457	SPEF2	Q9C093	1822 aa		15.04	■□□□□ -0
LTBP4-238	ENST00000622457	NEURL1B	A8MQ27	555 aa		15.04	■□□□□ -0
LTBP4-238	ENST00000622457	TRAF5	O00463	557 aa		15.04	■□□□□ -0
LTBP4-238	ENST00000622457	IRS4	O14654	1257 aa	Predicted RBP	15.04	■□□□□ -0
LTBP4-238	ENST00000622457	FKBP4	Q02790	459 aa	Known RBP eCLIP	15.04	■□□□□ -0
LTBP4-238	ENST00000622457	DNAAF4	Q8WXU2	420 aa		15.04	■□□□□ -0
LTBP4-238	ENST00000622457	ZIC5	Q96T25	663 aa		15.04	■□□□□ -0
LTBP4-238	ENST00000622457	IQCA1L	A6NCM1	817 aa		15.03	■□□□□ -0
LTBP4-238	ENST00000622457	PPEF1	O14829	653 aa	Predicted RBP	15.03	■□□□□ -0
LTBP4-238	ENST00000622457	DDX46	Q7L014	1031 aa	Known RBP	15.03	■□□□□ -0
LTBP4-238	ENST00000622457	TMC4	Q7Z404	712 aa		15.03	■□□□□ -0
LTBP4-238	ENST00000622457	CDCA7L	Q96GN5	454 aa		15.03	■□□□□ -0
LTBP4-238	ENST00000622457	PSMD1	Q99460	953 aa		15.03	■□□□□ -0
LTBP4-238	ENST00000622457	HACL1	Q9UJ83	578 aa		15.03	■□□□□ -0
LTBP4-238	ENST00000622457	COL4A1	P02462	1669 aa		15.03	■□□□□ -0
LTBP4-238	ENST00000622457	BBOX1	O75936	387 aa		15.02	■□□□□ -0
LTBP4-238	ENST00000622457	GRAP	Q13588	217 aa		15.02	■□□□□ -0
LTBP4-238	ENST00000622457	ALDH1L2	Q3SY69	923 aa		15.02	■□□□□ -0
LTBP4-238	ENST00000622457	PRPF38B	Q5VTL8	546 aa	Known RBP	15.02	■□□□□ -0
LTBP4-238	ENST00000622457	LINS1	Q8NG48	757 aa		15.02	■□□□□ -0
LTBP4-238	ENST00000622457	GRAPL	Q8TC17	118 aa	Predicted RBP	15.02	■□□□□ -0
LTBP4-238	ENST00000622457	ATP6V0A2	Q9Y487	856 aa		15.02	■□□□□ -0
LTBP4-238	ENST00000622457	DUOX1	Q9NRD9	1551 aa		15.02	□□□□□ -0.01
LTBP4-238	ENST00000622457	RTL9	Q8NET4	1388 aa		15.01	□□□□□ -0.01
LTBP4-238	ENST00000622457	PTPRC	P08575	1304 aa		15.01	□□□□□ -0.01
LTBP4-238	ENST00000622457	PDE8A	O60658	829 aa		15.01	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms