RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 HSPA4P34932 840 aa15.55■□□□□ 0.08
SIRPA-204ENST00000622179 ZNF830Q96NB3 372 aaPredicted RBP15.55■□□□□ 0.08
SIRPA-204ENST00000622179 UQCRHLA0A096LP55 91 aa15.55■□□□□ 0.08
SIRPA-204ENST00000622179 UQCRHP07919 91 aa15.55■□□□□ 0.08
SIRPA-204ENST00000622179 FAM173BQ6P4H8 233 aa15.55■□□□□ 0.08
SIRPA-204ENST00000622179 ZNF594Q96JF6 807 aaPredicted RBP15.55■□□□□ 0.08
SIRPA-204ENST00000622179 LMBRD1Q9NUN5 540 aa15.55■□□□□ 0.08
SIRPA-204ENST00000622179 EAF2Q96CJ1 260 aaPredicted RBP15.54■□□□□ 0.08
SIRPA-204ENST00000622179 TEX13AQ9BXU3 409 aaPredicted RBP15.54■□□□□ 0.08
SIRPA-204ENST00000622179 CDKL5O76039 1030 aa15.54■□□□□ 0.08
SIRPA-204ENST00000622179 RBSNQ9H1K0 784 aa15.54■□□□□ 0.08
SIRPA-204ENST00000622179 BRMS1Q9HCU9 246 aa15.54■□□□□ 0.08
SIRPA-204ENST00000622179 AOX1Q06278 1338 aa15.54■□□□□ 0.08
SIRPA-204ENST00000622179 ARHGEF25Q86VW2 580 aa15.54■□□□□ 0.08
SIRPA-204ENST00000622179 CEP57L1Q8IYX8 460 aa15.54■□□□□ 0.08
SIRPA-204ENST00000622179 FAM89AQ96GI7 184 aa15.54■□□□□ 0.08
SIRPA-204ENST00000622179 RRAGDQ9NQL2 400 aaPredicted RBP15.54■□□□□ 0.08
SIRPA-204ENST00000622179 TNNI3KQ59H18 835 aa15.53■□□□□ 0.08
SIRPA-204ENST00000622179 FPGT-TNNI3KV9GXZ4 949 aa15.53■□□□□ 0.08
SIRPA-204ENST00000622179 ATP2B3Q16720 1220 aa15.53■□□□□ 0.08
SIRPA-204ENST00000622179 MAP3K12Q12852 859 aa15.53■□□□□ 0.08
SIRPA-204ENST00000622179 SETD1BQ9UPS6 1966 aaKnown RBP15.53■□□□□ 0.08
SIRPA-204ENST00000622179 CLCN1P35523 988 aa15.53■□□□□ 0.08
SIRPA-204ENST00000622179 PTH1RQ03431 593 aa15.53■□□□□ 0.08
SIRPA-204ENST00000622179 HELBQ8NG08 1087 aaPredicted RBP15.53■□□□□ 0.08
SIRPA-204ENST00000622179 DACT1Q9NYF0 836 aa15.53■□□□□ 0.08
SIRPA-204ENST00000622179 ORC3Q9UBD5 711 aaPredicted RBP15.53■□□□□ 0.08
SIRPA-204ENST00000622179 TPM1P09493 284 aa15.52■□□□□ 0.08
SIRPA-204ENST00000622179 MICU3Q86XE3 530 aa15.52■□□□□ 0.08
SIRPA-204ENST00000622179 MED14O60244 1454 aa15.52■□□□□ 0.08
SIRPA-204ENST00000622179 NEURL1BA8MQ27 555 aa15.52■□□□□ 0.08
SIRPA-204ENST00000622179 SLC27A2O14975 620 aa15.52■□□□□ 0.08
SIRPA-204ENST00000622179 SERPINC1P01008 464 aa15.52■□□□□ 0.08
SIRPA-204ENST00000622179 FSIP1Q8NA03 581 aa15.52■□□□□ 0.08
SIRPA-204ENST00000622179 PLBD2Q8NHP8 589 aa15.52■□□□□ 0.08
SIRPA-204ENST00000622179 OSBPL3Q9H4L5 887 aa15.52■□□□□ 0.08
SIRPA-204ENST00000622179 CPSF1Q10570 1443 aaKnown RBP15.52■□□□□ 0.08
SIRPA-204ENST00000622179 KIAA1210Q9ULL0 1709 aa15.52■□□□□ 0.07
SIRPA-204ENST00000622179 ACSBG1Q96GR2 724 aa15.52■□□□□ 0.07
SIRPA-204ENST00000622179 IQSEC3Q9UPP2 1182 aaPredicted RBP15.52■□□□□ 0.07
SIRPA-204ENST00000622179 APOBRQ0VD83 1088 aa15.51■□□□□ 0.07
SIRPA-204ENST00000622179 GADD45BO75293 160 aaPredicted RBP15.51■□□□□ 0.07
SIRPA-204ENST00000622179 GAS2L3Q86XJ1 694 aa15.51■□□□□ 0.07
SIRPA-204ENST00000622179 KLF18A0A0U1RQI7 1052 aa15.51■□□□□ 0.07
SIRPA-204ENST00000622179 DDX19AQ9NUU7 478 aaKnown RBP15.51■□□□□ 0.07
SIRPA-204ENST00000622179 PIK3C2BO00750 1634 aa15.51■□□□□ 0.07
SIRPA-204ENST00000622179 IFIT3O14879 490 aaKnown RBP15.51■□□□□ 0.07
SIRPA-204ENST00000622179 SLC5A1P13866 664 aa15.51■□□□□ 0.07
SIRPA-204ENST00000622179 PHKG2P15735 406 aa15.51■□□□□ 0.07
SIRPA-204ENST00000622179 ZNF165P49910 485 aa15.51■□□□□ 0.07
SIRPA-204ENST00000622179 TSR1Q2NL82 804 aaKnown RBP15.51■□□□□ 0.07
SIRPA-204ENST00000622179 IQSEC2Q5JU85 1478 aa15.5■□□□□ 0.07
SIRPA-204ENST00000622179 SLC9C2Q5TAH2 1124 aa15.5■□□□□ 0.07
SIRPA-204ENST00000622179 BIN1O00499 593 aa15.5■□□□□ 0.07
SIRPA-204ENST00000622179 CCAR1Q8IX12 1150 aaKnown RBP15.5■□□□□ 0.07
SIRPA-204ENST00000622179 RASEFQ8IZ41 740 aa15.5■□□□□ 0.07
SIRPA-204ENST00000622179 NCOA7Q8NI08 942 aa15.5■□□□□ 0.07
SIRPA-204ENST00000622179 STAP2Q9UGK3 403 aa15.5■□□□□ 0.07
SIRPA-204ENST00000622179 PCMTD1Q96MG8 357 aaPredicted RBP15.5■□□□□ 0.07
SIRPA-204ENST00000622179 A0A1B0GUL7 405 aa15.49■□□□□ 0.07
SIRPA-204ENST00000622179 MROH2AA6NES4 1674 aa15.49■□□□□ 0.07
SIRPA-204ENST00000622179 TMEM63CQ9P1W3 806 aa15.49■□□□□ 0.07
SIRPA-204ENST00000622179 PCDH11XQ9BZA7 1347 aa15.49■□□□□ 0.07
SIRPA-204ENST00000622179 PCDH11YQ9BZA8 1340 aa15.49■□□□□ 0.07
SIRPA-204ENST00000622179 MCM5P33992 734 aa15.49■□□□□ 0.07
SIRPA-204ENST00000622179 ANKRD20A12PQ8NF67 263 aa15.49■□□□□ 0.07
SIRPA-204ENST00000622179 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
SIRPA-204ENST00000622179 BRD1O95696 1058 aa15.49■□□□□ 0.07
SIRPA-204ENST00000622179 SLC12A7Q9Y666 1083 aa15.49■□□□□ 0.07
SIRPA-204ENST00000622179 SLC3A2P08195 630 aaKnown RBP15.48■□□□□ 0.07
SIRPA-204ENST00000622179 RNF113AO15541 343 aaKnown RBP15.48■□□□□ 0.07
SIRPA-204ENST00000622179 A0A0D9SFI3 127 aa15.48■□□□□ 0.07
SIRPA-204ENST00000622179 ISM2Q6H9L7 571 aa15.48■□□□□ 0.07
SIRPA-204ENST00000622179 GOLGA8AA7E2F4 631 aa15.48■□□□□ 0.07
SIRPA-204ENST00000622179 EYA2O00167 538 aa15.48■□□□□ 0.07
SIRPA-204ENST00000622179 RPS6KB1P23443 525 aa15.48■□□□□ 0.07
SIRPA-204ENST00000622179 KDRP35968 1356 aa15.47■□□□□ 0.07
SIRPA-204ENST00000622179 RANBP6O60518 1105 aaKnown RBP15.47■□□□□ 0.07
SIRPA-204ENST00000622179 ZSCAN16Q9H4T2 348 aaPredicted RBP15.47■□□□□ 0.07
SIRPA-204ENST00000622179 TTC12Q9H892 705 aaPredicted RBP15.47■□□□□ 0.07
SIRPA-204ENST00000622179 CPS1P31327 1500 aa15.47■□□□□ 0.07
SIRPA-204ENST00000622179 TMEM67Q5HYA8 995 aa15.47■□□□□ 0.07
SIRPA-204ENST00000622179 DHX32Q7L7V1 743 aaKnown RBP15.47■□□□□ 0.07
SIRPA-204ENST00000622179 ANO10Q9NW15 660 aa15.47■□□□□ 0.07
SIRPA-204ENST00000622179 BTG4Q9NY30 223 aa15.47■□□□□ 0.07
SIRPA-204ENST00000622179 TLR7Q9NYK1 1049 aaKnown RBP15.47■□□□□ 0.07
SIRPA-204ENST00000622179 ZNF652Q9Y2D9 606 aa15.47■□□□□ 0.07
SIRPA-204ENST00000622179 TTLL7Q6ZT98 887 aa15.47■□□□□ 0.07
SIRPA-204ENST00000622179 MYO3AQ8NEV4 1616 aa15.47■□□□□ 0.07
SIRPA-204ENST00000622179 TTF1Q15361 905 aaPredicted RBP15.46■□□□□ 0.07
SIRPA-204ENST00000622179 CAVIN4Q5BKX8 364 aa15.46■□□□□ 0.07
SIRPA-204ENST00000622179 SEC62Q99442 399 aaKnown RBP15.46■□□□□ 0.07
SIRPA-204ENST00000622179 CLIP2Q9UDT6 1046 aa15.46■□□□□ 0.07
SIRPA-204ENST00000622179 CLSTN1O94985 981 aa15.46■□□□□ 0.07
SIRPA-204ENST00000622179 ZFYP08048 801 aaPredicted RBP15.46■□□□□ 0.07
SIRPA-204ENST00000622179 ANO6Q4KMQ2 910 aa15.46■□□□□ 0.07
SIRPA-204ENST00000622179 IRS4O14654 1257 aaPredicted RBP15.46■□□□□ 0.07
SIRPA-204ENST00000622179 METAP2P50579 478 aaKnown RBP eCLIP15.46■□□□□ 0.07
SIRPA-204ENST00000622179 IARSP41252 1262 aaKnown RBP15.46■□□□□ 0.06
SIRPA-204ENST00000622179 ME3Q16798 604 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms