RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 CLIP2Q9UDT6 1046 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 COL17A1Q9UMD9 1497 aaPredicted RBP12.09□□□□□ -0.47
COL25A1-209ENST00000622134 PI4KAP2A4QPH2 592 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 SKIDA1Q1XH10 827 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 MICALCLQ6ZW33 695 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 PI4KAP1Q8N8J0 262 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 IL1RAPL2Q9NP60 686 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 PTPRKQ15262 1439 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 MX1P20591 662 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 LMAN1P49257 510 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 MAP9Q49MG5 647 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 COPS6Q7L5N1 327 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 SMTNL1A8MU46 457 aa12.08□□□□□ -0.47
COL25A1-209ENST00000622134 LINS1Q8NG48 757 aa12.08□□□□□ -0.47
COL25A1-209ENST00000622134 PHAXQ9H814 394 aaKnown RBP12.08□□□□□ -0.47
COL25A1-209ENST00000622134 MAP3K19Q56UN5 1328 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 RNF123Q5XPI4 1314 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 ATP2B1P20020 1258 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 DACH1Q9UI36 760 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 ZNF500O60304 480 aaPredicted RBP12.08□□□□□ -0.48
COL25A1-209ENST00000622134 SERPINC1P01008 464 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 TTC31Q49AM3 519 aaPredicted RBP12.08□□□□□ -0.48
COL25A1-209ENST00000622134 FILIP1LQ4L180 1135 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 IQCEQ6IPM2 695 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 PAF1Q8N7H5 531 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
COL25A1-209ENST00000622134 V9GYY5 206 aaPredicted RBP12.08□□□□□ -0.48
COL25A1-209ENST00000622134 GOLGA6L10A6NI86 522 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 RNMTO43148 476 aaKnown RBP12.08□□□□□ -0.48
COL25A1-209ENST00000622134 TMEM57Q8N5G2 664 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 SSH1Q8WYL5 1049 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 INCENPQ9NQS7 918 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 DISP3Q9P2K9 1392 aa12.08□□□□□ -0.48
COL25A1-209ENST00000622134 ATP5J2-PTCD1G3V325 749 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 ATP2B3Q16720 1220 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 TMEM87AQ8NBN3 555 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 CRACR2AQ9BSW2 395 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 ECHDC1Q9NTX5 307 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL25A1-209ENST00000622134 ERVV-2B6SEH9 535 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 ALDH1B1P30837 517 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 SPATA32Q96LK8 384 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 UPF3BQ9BZI7 483 aaKnown RBP12.07□□□□□ -0.48
COL25A1-209ENST00000622134 CFAP45Q9UL16 551 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 CHD1O14646 1710 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 ZNF213O14771 459 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 FAM193AP78312 1265 aa12.07□□□□□ -0.48
COL25A1-209ENST00000622134 POLR3AO14802 1390 aaPredicted RBP12.07□□□□□ -0.48
COL25A1-209ENST00000622134 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
COL25A1-209ENST00000622134 URI1O94763 535 aaPredicted RBP12.06□□□□□ -0.48
COL25A1-209ENST00000622134 BMP2KLQ5H9B9 411 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 EYA1Q99502 592 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 CENPHQ9H3R5 247 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 SH2D4AQ9H788 454 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
COL25A1-209ENST00000622134 A0A1B0GUL7 405 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 CATIPQ7Z7H3 387 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 SCLT1Q96NL6 688 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 VGLL3A8MV65 326 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 PRIM1P49642 420 aaKnown RBP12.06□□□□□ -0.48
COL25A1-209ENST00000622134 ZRSR2Q15696 482 aaKnown RBP12.06□□□□□ -0.48
COL25A1-209ENST00000622134 LARP1BQ659C4 914 aaKnown RBP12.06□□□□□ -0.48
COL25A1-209ENST00000622134 EVI5LQ96CN4 794 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 MYO6Q9UM54 1294 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 EXOC6BQ9Y2D4 811 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 PPP1R9BQ96SB3 815 aa12.06□□□□□ -0.48
COL25A1-209ENST00000622134 SH3TC1Q8TE82 1336 aa12.05□□□□□ -0.48
COL25A1-209ENST00000622134 RANBP6O60518 1105 aaKnown RBP12.05□□□□□ -0.48
COL25A1-209ENST00000622134 LTKP29376 864 aa12.05□□□□□ -0.48
COL25A1-209ENST00000622134 FOSBP53539 338 aa12.05□□□□□ -0.48
COL25A1-209ENST00000622134 RARSP54136 660 aaKnown RBP12.05□□□□□ -0.48
COL25A1-209ENST00000622134 SCAND2PQ9GZW5 306 aaPredicted RBP12.05□□□□□ -0.48
COL25A1-209ENST00000622134 LUC7LQ9NQ29 371 aaKnown RBP12.05□□□□□ -0.48
COL25A1-209ENST00000622134 MBIPQ9NS73 344 aa12.05□□□□□ -0.48
COL25A1-209ENST00000622134 GRM8O00222 908 aa12.05□□□□□ -0.48
COL25A1-209ENST00000622134 IGSF3O75054 1194 aa12.05□□□□□ -0.48
COL25A1-209ENST00000622134 SLU7O95391 586 aaKnown RBP12.05□□□□□ -0.48
COL25A1-209ENST00000622134 GPR162Q16538 588 aa12.05□□□□□ -0.48
COL25A1-209ENST00000622134 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
COL25A1-209ENST00000622134 SRRTQ9BXP5 876 aaKnown RBP12.05□□□□□ -0.48
COL25A1-209ENST00000622134 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
COL25A1-209ENST00000622134 NSFL1CQ9UNZ2 370 aaKnown RBP12.05□□□□□ -0.48
COL25A1-209ENST00000622134 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.05□□□□□ -0.48
COL25A1-209ENST00000622134 GOLGA6L9A6NEM1 432 aa12.05□□□□□ -0.48
COL25A1-209ENST00000622134 GNAQP50148 359 aa12.05□□□□□ -0.48
COL25A1-209ENST00000622134 SNW1Q13573 536 aaKnown RBP12.04□□□□□ -0.48
COL25A1-209ENST00000622134 DDX21Q9NR30 783 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL25A1-209ENST00000622134 IRS4O14654 1257 aaPredicted RBP12.04□□□□□ -0.48
COL25A1-209ENST00000622134 SLC39A6Q13433 755 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 PPFIBP1Q86W92 1011 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 NLGN1Q8N2Q7 840 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 PIBF1Q8WXW3 757 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 BOLA2Q9H3K6 86 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 HECW2Q9P2P5 1572 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 IGHDP01880 384 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 ZNF445P59923 1031 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms