RNA–Protein interactions for RNA: ENST00000621534.4

PSMD13-215, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5 BASIC

Gene PSMD13, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-215ENST00000621534 LAMB2P55268 1798 aa18.79■□□□□ 0.6
PSMD13-215ENST00000621534 MYH3P11055 1940 aa18.79■□□□□ 0.6
PSMD13-215ENST00000621534 FAM177BA6PVY3 158 aa18.78■□□□□ 0.6
PSMD13-215ENST00000621534 RFC4P35249 363 aa18.78■□□□□ 0.6
PSMD13-215ENST00000621534 PARP10Q53GL7 1025 aa18.78■□□□□ 0.6
PSMD13-215ENST00000621534 LMBR1LQ6UX01 489 aa18.78■□□□□ 0.6
PSMD13-215ENST00000621534 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
PSMD13-215ENST00000621534 PA2G4Q9UQ80 394 aaKnown RBP18.78■□□□□ 0.6
PSMD13-215ENST00000621534 SMARCA5O60264 1052 aaPredicted RBP18.77■□□□□ 0.6
PSMD13-215ENST00000621534 NTSR2O95665 410 aa18.77■□□□□ 0.6
PSMD13-215ENST00000621534 ZNF526Q8TF50 670 aaPredicted RBP18.77■□□□□ 0.6
PSMD13-215ENST00000621534 PLA2G12BQ9BX93 195 aa18.77■□□□□ 0.6
PSMD13-215ENST00000621534 SURF6O75683 361 aaKnown RBP18.76■□□□□ 0.59
PSMD13-215ENST00000621534 RFX5P48382 616 aaPredicted RBP18.76■□□□□ 0.59
PSMD13-215ENST00000621534 BICDL1Q6ZP65 573 aa18.76■□□□□ 0.59
PSMD13-215ENST00000621534 UTP14AQ9BVJ6 771 aaKnown RBP18.76■□□□□ 0.59
PSMD13-215ENST00000621534 IRS4O14654 1257 aaPredicted RBP18.76■□□□□ 0.59
PSMD13-215ENST00000621534 KLHDC4Q8TBB5 520 aa18.76■□□□□ 0.59
PSMD13-215ENST00000621534 NOP58Q9Y2X3 529 aaKnown RBP18.76■□□□□ 0.59
PSMD13-215ENST00000621534 SH3TC1Q8TE82 1336 aa18.75■□□□□ 0.59
PSMD13-215ENST00000621534 NLGN1Q8N2Q7 840 aa18.74■□□□□ 0.59
PSMD13-215ENST00000621534 CHMP3Q9Y3E7 222 aa18.74■□□□□ 0.59
PSMD13-215ENST00000621534 NUTM1Q86Y26 1132 aa18.73■□□□□ 0.59
PSMD13-215ENST00000621534 GYS1P13807 737 aa18.72■□□□□ 0.59
PSMD13-215ENST00000621534 HCLS1P14317 486 aaPredicted RBP18.72■□□□□ 0.59
PSMD13-215ENST00000621534 CTSWP56202 376 aa18.72■□□□□ 0.59
PSMD13-215ENST00000621534 PTPN12Q05209 780 aaKnown RBP18.72■□□□□ 0.59
PSMD13-215ENST00000621534 FAM161AQ3B820 660 aa18.72■□□□□ 0.59
PSMD13-215ENST00000621534 LRRCC1Q9C099 1032 aa18.72■□□□□ 0.59
PSMD13-215ENST00000621534 BCL11AQ9H165 835 aa18.72■□□□□ 0.59
PSMD13-215ENST00000621534 KIF13BQ9NQT8 1826 aa18.72■□□□□ 0.59
PSMD13-215ENST00000621534 CSF1RP07333 972 aa18.72■□□□□ 0.59
PSMD13-215ENST00000621534 C16orf71Q8IYS4 520 aaPredicted RBP18.72■□□□□ 0.59
PSMD13-215ENST00000621534 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
PSMD13-215ENST00000621534 CCDC85AQ96PX6 553 aaPredicted RBP18.72■□□□□ 0.59
PSMD13-215ENST00000621534 SIL1Q9H173 461 aa18.72■□□□□ 0.59
PSMD13-215ENST00000621534 COPRSQ9NQ92 184 aa18.72■□□□□ 0.59
PSMD13-215ENST00000621534 ABCC12Q96J65 1359 aa18.71■□□□□ 0.59
PSMD13-215ENST00000621534 A0A0G2JLW4 131 aa18.71■□□□□ 0.59
PSMD13-215ENST00000621534 PDE8AO60658 829 aa18.71■□□□□ 0.59
PSMD13-215ENST00000621534 RAB11FIP3O75154 756 aa18.71■□□□□ 0.59
PSMD13-215ENST00000621534 NFIXQ14938 502 aa18.71■□□□□ 0.59
PSMD13-215ENST00000621534 ERFEQ4G0M1 354 aa18.71■□□□□ 0.59
PSMD13-215ENST00000621534 TTLL11Q8NHH1 800 aa18.71■□□□□ 0.59
PSMD13-215ENST00000621534 SETDB2Q96T68 719 aa18.71■□□□□ 0.59
PSMD13-215ENST00000621534 KIAA1551Q9HCM1 1747 aa18.7■□□□□ 0.58
PSMD13-215ENST00000621534 C10orf71Q711Q0 1435 aa18.7■□□□□ 0.58
PSMD13-215ENST00000621534 TGFB2P61812 414 aa18.7■□□□□ 0.58
PSMD13-215ENST00000621534 HSP90AB4PQ58FF6 505 aa18.7■□□□□ 0.58
PSMD13-215ENST00000621534 RHPN1Q8TCX5 695 aa18.7■□□□□ 0.58
PSMD13-215ENST00000621534 OS9Q13438 667 aaPredicted RBP18.69■□□□□ 0.58
PSMD13-215ENST00000621534 KIF1BPQ96EK5 621 aa18.69■□□□□ 0.58
PSMD13-215ENST00000621534 ZNF594Q96JF6 807 aaPredicted RBP18.69■□□□□ 0.58
PSMD13-215ENST00000621534 GREM2Q9H772 168 aa18.69■□□□□ 0.58
PSMD13-215ENST00000621534 IL1RAPL2Q9NP60 686 aa18.69■□□□□ 0.58
PSMD13-215ENST00000621534 ZBTB47Q9UFB7 747 aaPredicted RBP18.69■□□□□ 0.58
PSMD13-215ENST00000621534 BCS1LQ9Y276 419 aa18.69■□□□□ 0.58
PSMD13-215ENST00000621534 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.69■□□□□ 0.58
PSMD13-215ENST00000621534 CARMIL3Q8ND23 1372 aa18.69■□□□□ 0.58
PSMD13-215ENST00000621534 SASH1O94885 1247 aa18.68■□□□□ 0.58
PSMD13-215ENST00000621534 NBPF5PQ86XG9 351 aaPredicted RBP18.68■□□□□ 0.58
PSMD13-215ENST00000621534 TNRC6CQ9HCJ0 1690 aaKnown RBP18.68■□□□□ 0.58
PSMD13-215ENST00000621534 G3BP1Q13283 466 aaKnown RBP eCLIP18.68■□□□□ 0.588e-11■■■□□ 14.7
PSMD13-215ENST00000621534 C3orf67Q6ZVT6 689 aa18.68■□□□□ 0.58
PSMD13-215ENST00000621534 PLEKHM2Q8IWE5 1019 aa18.68■□□□□ 0.58
PSMD13-215ENST00000621534 PARP3Q9Y6F1 533 aa18.68■□□□□ 0.58
PSMD13-215ENST00000621534 SALL3Q9BXA9 1300 aa18.67■□□□□ 0.58
PSMD13-215ENST00000621534 COL4A1P02462 1669 aa18.67■□□□□ 0.58
PSMD13-215ENST00000621534 DPEP1P16444 411 aa18.67■□□□□ 0.58
PSMD13-215ENST00000621534 NYXQ9GZU5 481 aa18.67■□□□□ 0.58
PSMD13-215ENST00000621534 CCDC57Q2TAC2 916 aa18.66■□□□□ 0.58
PSMD13-215ENST00000621534 ERC1Q8IUD2 1116 aa18.66■□□□□ 0.58
PSMD13-215ENST00000621534 CCDC24Q8N4L8 307 aa18.66■□□□□ 0.58
PSMD13-215ENST00000621534 ITGA6P23229 1130 aa18.65■□□□□ 0.58
PSMD13-215ENST00000621534 TM4SF1P30408 202 aa18.65■□□□□ 0.58
PSMD13-215ENST00000621534 DDR1Q08345 913 aa18.65■□□□□ 0.58
PSMD13-215ENST00000621534 IFIT5Q13325 482 aaKnown RBP18.65■□□□□ 0.58
PSMD13-215ENST00000621534 ATG9AQ7Z3C6 839 aa18.65■□□□□ 0.58
PSMD13-215ENST00000621534 SPEF2Q9C093 1822 aa18.65■□□□□ 0.58
PSMD13-215ENST00000621534 LRRC24Q50LG9 513 aa18.64■□□□□ 0.58
PSMD13-215ENST00000621534 SLC10A5Q5PT55 438 aa18.64■□□□□ 0.58
PSMD13-215ENST00000621534 ARHGAP27Q6ZUM4 889 aa18.64■□□□□ 0.58
PSMD13-215ENST00000621534 PUS3Q9BZE2 481 aaKnown RBP18.64■□□□□ 0.58
PSMD13-215ENST00000621534 RTL9Q8NET4 1388 aa18.64■□□□□ 0.57
PSMD13-215ENST00000621534 KIF3CO14782 793 aa18.64■□□□□ 0.57
PSMD13-215ENST00000621534 HSPA6P17066 643 aa18.64■□□□□ 0.57
PSMD13-215ENST00000621534 GTF2E1P29083 439 aaPredicted RBP18.64■□□□□ 0.57
PSMD13-215ENST00000621534 TPTE2Q6XPS3 522 aa18.64■□□□□ 0.57
PSMD13-215ENST00000621534 ANKRD18BA2A2Z9 1011 aa18.63■□□□□ 0.57
PSMD13-215ENST00000621534 EYA2O00167 538 aa18.63■□□□□ 0.57
PSMD13-215ENST00000621534 POLRMTO00411 1230 aaKnown RBP18.63■□□□□ 0.57
PSMD13-215ENST00000621534 HSP90B1P14625 803 aaKnown RBP18.63■□□□□ 0.57
PSMD13-215ENST00000621534 TFCP2Q12800 502 aa18.63■□□□□ 0.57
PSMD13-215ENST00000621534 TAF1P21675 1872 aa18.62■□□□□ 0.57
PSMD13-215ENST00000621534 BRCA1P38398 1863 aaKnown RBP18.62■□□□□ 0.57
PSMD13-215ENST00000621534 RIC1Q4ADV7 1423 aa18.62■□□□□ 0.57
PSMD13-215ENST00000621534 NRXN2Q9P2S2 1712 aa18.62■□□□□ 0.57
PSMD13-215ENST00000621534 CIAO1O76071 339 aa18.62■□□□□ 0.57
PSMD13-215ENST00000621534 CCDC152Q4G0S7 254 aa18.62■□□□□ 0.57
PSMD13-215ENST00000621534 TAF7LQ5H9L4 462 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms