RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 RTFDC1Q9BY42 306 aaPredicted RBP31■■■□□ 2.55
ATXN3-253ENST00000621269 LMOD1P29536 600 aaPredicted RBP30.99■■■□□ 2.55
ATXN3-253ENST00000621269 RTL5Q5HYW3 569 aaPredicted RBP30.99■■■□□ 2.55
ATXN3-253ENST00000621269 MRS2Q9HD23 443 aa30.99■■■□□ 2.55
ATXN3-253ENST00000621269 CCDC27Q2M243 656 aa30.98■■■□□ 2.55
ATXN3-253ENST00000621269 CREBZFQ9NS37 354 aa30.98■■■□□ 2.55
ATXN3-253ENST00000621269 DDX58O95786 925 aaKnown RBP30.97■■■□□ 2.55
ATXN3-253ENST00000621269 SF3B3Q15393 1217 aaKnown RBP30.97■■■□□ 2.55
ATXN3-253ENST00000621269 IRS4O14654 1257 aaPredicted RBP30.96■■■□□ 2.55
ATXN3-253ENST00000621269 MYD88Q99836 296 aa30.96■■■□□ 2.55
ATXN3-253ENST00000621269 WWC1Q8IX03 1113 aa30.95■■■□□ 2.55
ATXN3-253ENST00000621269 TSR2Q969E8 191 aaKnown RBP30.95■■■□□ 2.55
ATXN3-253ENST00000621269 ZNRF3Q9ULT6 936 aa30.95■■■□□ 2.55
ATXN3-253ENST00000621269 HSP90B1P14625 803 aaKnown RBP30.94■■■□□ 2.54
ATXN3-253ENST00000621269 DDX60Q8IY21 1712 aaKnown RBP30.94■■■□□ 2.54
ATXN3-253ENST00000621269 TSPYL6Q8N831 410 aa30.94■■■□□ 2.54
ATXN3-253ENST00000621269 ZBTB38Q8NAP3 1195 aaPredicted RBP30.94■■■□□ 2.54
ATXN3-253ENST00000621269 PASKQ96RG2 1323 aa30.94■■■□□ 2.54
ATXN3-253ENST00000621269 IFFO2Q5TF58 517 aa30.93■■■□□ 2.54
ATXN3-253ENST00000621269 ITGBL1O95965 494 aaPredicted RBP30.92■■■□□ 2.54
ATXN3-253ENST00000621269 SCNN1DP51172 638 aa30.92■■■□□ 2.54
ATXN3-253ENST00000621269 KIAA2012Q0VF49 1180 aa30.92■■■□□ 2.54
ATXN3-253ENST00000621269 CCDC191Q8NCU4 936 aa30.91■■■□□ 2.54
ATXN3-253ENST00000621269 CELF1Q92879 486 aaKnown RBP30.91■■■□□ 2.54
ATXN3-253ENST00000621269 STK31Q9BXU1 1019 aa30.91■■■□□ 2.54
ATXN3-253ENST00000621269 EPS15P42566 896 aa30.9■■■□□ 2.54
ATXN3-253ENST00000621269 NCBP3Q53F19 620 aaKnown RBP30.9■■■□□ 2.54
ATXN3-253ENST00000621269 MAP1SQ66K74 1059 aaPredicted RBP30.9■■■□□ 2.54
ATXN3-253ENST00000621269 CNTROBQ8N137 903 aa30.9■■■□□ 2.54
ATXN3-253ENST00000621269 METTL22Q9BUU2 404 aaPredicted RBP30.9■■■□□ 2.54
ATXN3-253ENST00000621269 CXCL9Q07325 125 aa30.89■■■□□ 2.54
ATXN3-253ENST00000621269 CWC25Q9NXE8 425 aaPredicted RBP30.89■■■□□ 2.54
ATXN3-253ENST00000621269 ADAMTSL1Q8N6G6 1762 aa30.89■■■□□ 2.54
ATXN3-253ENST00000621269 MKRN1Q9UHC7 482 aaKnown RBP30.88■■■□□ 2.53
ATXN3-253ENST00000621269 NSFL1CQ9UNZ2 370 aaKnown RBP30.88■■■□□ 2.53
ATXN3-253ENST00000621269 MAP3K2Q9Y2U5 619 aa30.88■■■□□ 2.53
ATXN3-253ENST00000621269 IL16Q14005 1332 aa30.88■■■□□ 2.53
ATXN3-253ENST00000621269 TMEM88BA6NKF7 163 aa30.87■■■□□ 2.53
ATXN3-253ENST00000621269 PCCAP05165 728 aaPredicted RBP30.87■■■□□ 2.53
ATXN3-253ENST00000621269 TWISTNBQ3B726 338 aaPredicted RBP30.87■■■□□ 2.53
ATXN3-253ENST00000621269 USP50Q70EL3 339 aaPredicted RBP30.87■■■□□ 2.53
ATXN3-253ENST00000621269 TAF1P21675 1872 aa30.87■■■□□ 2.53
ATXN3-253ENST00000621269 RPS8P62241 208 aaKnown RBP30.86■■■□□ 2.53
ATXN3-253ENST00000621269 TNIP1Q15025 636 aa30.86■■■□□ 2.53
ATXN3-253ENST00000621269 CIAPIN1Q6FI81 312 aa30.86■■■□□ 2.53
ATXN3-253ENST00000621269 KSR2Q6VAB6 950 aa30.86■■■□□ 2.53
ATXN3-253ENST00000621269 WASHC4Q2M389 1173 aa30.85■■■□□ 2.53
ATXN3-253ENST00000621269 GPRC5DQ9NZD1 345 aa30.85■■■□□ 2.53
ATXN3-253ENST00000621269 LTBP1Q14766 1721 aa30.84■■■□□ 2.53
ATXN3-253ENST00000621269 RAD17O75943 681 aa30.84■■■□□ 2.53
ATXN3-253ENST00000621269 LRRC37AA6NMS7 1700 aa30.84■■■□□ 2.53
ATXN3-253ENST00000621269 PI4KAP2A4QPH2 592 aa30.83■■■□□ 2.53
ATXN3-253ENST00000621269 C6orf229H3BNL8 230 aa30.83■■■□□ 2.53
ATXN3-253ENST00000621269 PDE8AO60658 829 aa30.83■■■□□ 2.53
ATXN3-253ENST00000621269 NEXNQ0ZGT2 675 aa30.83■■■□□ 2.53
ATXN3-253ENST00000621269 CCDC152Q4G0S7 254 aa30.83■■■□□ 2.53
ATXN3-253ENST00000621269 PI4KAP1Q8N8J0 262 aa30.83■■■□□ 2.53
ATXN3-253ENST00000621269 JARID2Q92833 1246 aaPredicted RBP30.83■■■□□ 2.53
ATXN3-253ENST00000621269 ADARB2Q9NS39 739 aaKnown RBP30.83■■■□□ 2.53
ATXN3-253ENST00000621269 SALL2Q9Y467 1007 aaPredicted RBP30.83■■■□□ 2.53
ATXN3-253ENST00000621269 GMPSP49915 693 aaPredicted RBP30.82■■■□□ 2.52
ATXN3-253ENST00000621269 GPSM2P81274 684 aa30.82■■■□□ 2.52
ATXN3-253ENST00000621269 BCL2L13Q9BXK5 485 aa30.82■■■□□ 2.52
ATXN3-253ENST00000621269 DUOX1Q9NRD9 1551 aa30.81■■■□□ 2.52
ATXN3-253ENST00000621269 SLC4A2P04920 1241 aa30.81■■■□□ 2.52
ATXN3-253ENST00000621269 EYA3Q99504 573 aa30.81■■■□□ 2.52
ATXN3-253ENST00000621269 SEC31BQ9NQW1 1179 aa30.81■■■□□ 2.52
ATXN3-253ENST00000621269 CNTNAP1P78357 1384 aa30.8■■■□□ 2.52
ATXN3-253ENST00000621269 RIMBP2O15034 1052 aa30.8■■■□□ 2.52
ATXN3-253ENST00000621269 WDR63Q8IWG1 891 aa30.8■■■□□ 2.52
ATXN3-253ENST00000621269 POLLQ9UGP5 575 aa30.8■■■□□ 2.52
ATXN3-253ENST00000621269 HSPA1AP0DMV8 641 aaKnown RBP30.79■■■□□ 2.52
ATXN3-253ENST00000621269 HSPA1BP0DMV9 641 aaKnown RBP30.79■■■□□ 2.52
ATXN3-253ENST00000621269 CDHR2Q9BYE9 1310 aa30.78■■■□□ 2.52
ATXN3-253ENST00000621269 FANCIQ9NVI1 1328 aa30.78■■■□□ 2.52
ATXN3-253ENST00000621269 YDJCA8MPS7 323 aa30.78■■■□□ 2.52
ATXN3-253ENST00000621269 CCDC85AQ96PX6 553 aaPredicted RBP30.78■■■□□ 2.52
ATXN3-253ENST00000621269 IGKV5-2P06315 115 aa30.77■■■□□ 2.52
ATXN3-253ENST00000621269 TBC1D16Q8TBP0 767 aa30.77■■■□□ 2.52
ATXN3-253ENST00000621269 DBNDD1Q9H9R9 158 aa30.77■■■□□ 2.52
ATXN3-253ENST00000621269 COL4A1P02462 1669 aa30.77■■■□□ 2.52
ATXN3-253ENST00000621269 G2E3Q7L622 706 aa30.76■■■□□ 2.51
ATXN3-253ENST00000621269 ANKIB1Q9P2G1 1089 aa30.76■■■□□ 2.51
ATXN3-253ENST00000621269 ZC3H12CQ9C0D7 883 aaKnown RBP30.75■■■□□ 2.51
ATXN3-253ENST00000621269 CWF19L2Q2TBE0 894 aaKnown RBP30.74■■■□□ 2.51
ATXN3-253ENST00000621269 ANKRD18AQ8IVF6 992 aa30.74■■■□□ 2.51
ATXN3-253ENST00000621269 FAM9BQ8IZU0 186 aa30.74■■■□□ 2.51
ATXN3-253ENST00000621269 PODXL2Q9NZ53 605 aa30.74■■■□□ 2.51
ATXN3-253ENST00000621269 ABT1Q9ULW3 272 aaKnown RBP30.74■■■□□ 2.51
ATXN3-253ENST00000621269 PCNTO95613 3336 aa30.73■■■□□ 2.51
ATXN3-253ENST00000621269 DOK7Q18PE1 504 aa30.73■■■□□ 2.51
ATXN3-253ENST00000621269 CNOT7Q9UIV1 285 aaKnown RBP30.73■■■□□ 2.51
ATXN3-253ENST00000621269 NEURL1BA8MQ27 555 aa30.72■■■□□ 2.51
ATXN3-253ENST00000621269 G3V3G9 751 aa30.72■■■□□ 2.51
ATXN3-253ENST00000621269 H7C1D1 291 aa30.72■■■□□ 2.51
ATXN3-253ENST00000621269 ECE2O60344 883 aa30.72■■■□□ 2.51
ATXN3-253ENST00000621269 UFL1O94874 794 aa30.72■■■□□ 2.51
ATXN3-253ENST00000621269 VEGFBP49765 207 aa30.72■■■□□ 2.51
ATXN3-253ENST00000621269 CTSWP56202 376 aa30.72■■■□□ 2.51
ATXN3-253ENST00000621269 FLIIQ13045 1269 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms