RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 ARSDP51689 593 aa5.73□□□□□ -1.49
LRRC39-204ENST00000620882 TYRO3Q06418 890 aa5.73□□□□□ -1.49
LRRC39-204ENST00000620882 PDE12Q6L8Q7 609 aaKnown RBP5.73□□□□□ -1.49
LRRC39-204ENST00000620882 BICDL1Q6ZP65 573 aa5.73□□□□□ -1.49
LRRC39-204ENST00000620882 ZNF598Q86UK7 904 aaKnown RBP5.73□□□□□ -1.49
LRRC39-204ENST00000620882 C3orf58Q8NDZ4 430 aa5.73□□□□□ -1.49
LRRC39-204ENST00000620882 GLIS3Q8NEA6 775 aa5.73□□□□□ -1.49
LRRC39-204ENST00000620882 TTC16Q8NEE8 873 aa5.73□□□□□ -1.49
LRRC39-204ENST00000620882 ZIC5Q96T25 663 aa5.73□□□□□ -1.49
LRRC39-204ENST00000620882 ZSWIM4Q9H7M6 989 aa5.73□□□□□ -1.49
LRRC39-204ENST00000620882 POLMQ9NP87 494 aaPredicted RBP5.73□□□□□ -1.49
LRRC39-204ENST00000620882 KANSL3Q9P2N6 904 aa5.73□□□□□ -1.49
LRRC39-204ENST00000620882 FAM8A1Q9UBU6 413 aa5.73□□□□□ -1.49
LRRC39-204ENST00000620882 SPINT1O43278 529 aa5.72□□□□□ -1.49
LRRC39-204ENST00000620882 RHOQP17081 205 aa5.72□□□□□ -1.49
LRRC39-204ENST00000620882 GPC1P35052 558 aa5.72□□□□□ -1.49
LRRC39-204ENST00000620882 GNL2Q13823 731 aaKnown RBP5.72□□□□□ -1.49
LRRC39-204ENST00000620882 PEAR1Q5VY43 1037 aaPredicted RBP5.72□□□□□ -1.49
LRRC39-204ENST00000620882 NBPF10Q6P3W6 841 aaKnown RBP5.72□□□□□ -1.49
LRRC39-204ENST00000620882 LINC00528Q8N1L1 170 aa5.72□□□□□ -1.49
LRRC39-204ENST00000620882 RNF217Q8TC41 542 aa5.72□□□□□ -1.49
LRRC39-204ENST00000620882 FRMD6Q96NE9 622 aa5.72□□□□□ -1.49
LRRC39-204ENST00000620882 ZDHHC3Q9NYG2 299 aa5.72□□□□□ -1.49
LRRC39-204ENST00000620882 TBX22Q9Y458 520 aa5.72□□□□□ -1.49
LRRC39-204ENST00000620882 GDF9O60383 454 aa5.71□□□□□ -1.49
LRRC39-204ENST00000620882 TRIM67Q6ZTA4 783 aa5.71□□□□□ -1.49
LRRC39-204ENST00000620882 JAZF1Q86VZ6 243 aa5.71□□□□□ -1.49
LRRC39-204ENST00000620882 ZCCHC2Q9C0B9 1178 aaKnown RBP5.71□□□□□ -1.49
LRRC39-204ENST00000620882 TOR4AQ9NXH8 423 aa5.71□□□□□ -1.49
LRRC39-204ENST00000620882 ADAMTS1Q9UHI8 967 aa5.71□□□□□ -1.49
LRRC39-204ENST00000620882 SPATA31C2B4DYI2 1134 aa5.71□□□□□ -1.5
LRRC39-204ENST00000620882 XYLBO75191 536 aa5.71□□□□□ -1.5
LRRC39-204ENST00000620882 BMS1Q14692 1282 aaKnown RBP5.71□□□□□ -1.5
LRRC39-204ENST00000620882 GRIN2CQ14957 1233 aa5.71□□□□□ -1.5
LRRC39-204ENST00000620882 CTC1Q2NKJ3 1217 aa5.71□□□□□ -1.5
LRRC39-204ENST00000620882 ARSJQ5FYB0 599 aaPredicted RBP5.71□□□□□ -1.5
LRRC39-204ENST00000620882 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.71□□□□□ -1.5
LRRC39-204ENST00000620882 HCN2Q9UL51 889 aa5.71□□□□□ -1.5
LRRC39-204ENST00000620882 TTC24A2A3L6 582 aaPredicted RBP5.7□□□□□ -1.5
LRRC39-204ENST00000620882 ANKRD62A6NC57 917 aa5.7□□□□□ -1.5
LRRC39-204ENST00000620882 GADD45BO75293 160 aaPredicted RBP5.7□□□□□ -1.5
LRRC39-204ENST00000620882 ACPPP15309 386 aa5.7□□□□□ -1.5
LRRC39-204ENST00000620882 GTF2E1P29083 439 aaPredicted RBP5.7□□□□□ -1.5
LRRC39-204ENST00000620882 ITGAEP38570 1179 aa5.7□□□□□ -1.5
LRRC39-204ENST00000620882 ST13P50502 369 aaKnown RBP5.7□□□□□ -1.5
LRRC39-204ENST00000620882 GALNT12Q8IXK2 581 aa5.7□□□□□ -1.5
LRRC39-204ENST00000620882 ARMC5Q96C12 935 aa5.7□□□□□ -1.5
LRRC39-204ENST00000620882 GPRASP2Q96D09 838 aa5.7□□□□□ -1.5
LRRC39-204ENST00000620882 HIRIP3Q9BW71 556 aaPredicted RBP5.7□□□□□ -1.5
LRRC39-204ENST00000620882 GPAMQ9HCL2 828 aa5.7□□□□□ -1.5
LRRC39-204ENST00000620882 FAM13BQ9NYF5 915 aa5.7□□□□□ -1.5
LRRC39-204ENST00000620882 TATP17735 454 aaPredicted RBP5.69□□□□□ -1.5
LRRC39-204ENST00000620882 VEGFBP49765 207 aa5.69□□□□□ -1.5
LRRC39-204ENST00000620882 NOP9Q86U38 636 aaKnown RBP5.69□□□□□ -1.5
LRRC39-204ENST00000620882 NEUROD4Q9HD90 331 aa5.69□□□□□ -1.5
LRRC39-204ENST00000620882 ABI2Q9NYB9 513 aaPredicted RBP5.69□□□□□ -1.5
LRRC39-204ENST00000620882 A0A1W2PNR3 127 aa5.69□□□□□ -1.5
LRRC39-204ENST00000620882 TLDC2A0PJX2 215 aa5.69□□□□□ -1.5
LRRC39-204ENST00000620882 RPLP1P05386 114 aaKnown RBP5.69□□□□□ -1.5
LRRC39-204ENST00000620882 MSX1P28360 303 aa5.69□□□□□ -1.5
LRRC39-204ENST00000620882 C6orf118Q5T5N4 469 aa5.69□□□□□ -1.5
LRRC39-204ENST00000620882 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.69□□□□□ -1.5
LRRC39-204ENST00000620882 TRPA1O75762 1119 aa5.68□□□□□ -1.5
LRRC39-204ENST00000620882 NEFLP07196 543 aa5.68□□□□□ -1.5
LRRC39-204ENST00000620882 THBS1P07996 1170 aa5.68□□□□□ -1.5
LRRC39-204ENST00000620882 KRT25Q7Z3Z0 450 aa5.68□□□□□ -1.5
LRRC39-204ENST00000620882 TSEN34Q9BSV6 310 aaKnown RBP5.68□□□□□ -1.5
LRRC39-204ENST00000620882 OSBPL2Q9H1P3 480 aa5.68□□□□□ -1.5
LRRC39-204ENST00000620882 RUBCNLQ9H714 662 aa5.68□□□□□ -1.5
LRRC39-204ENST00000620882 ZNF408Q9H9D4 720 aa5.68□□□□□ -1.5
LRRC39-204ENST00000620882 SALL4Q9UJQ4 1053 aa5.68□□□□□ -1.5
LRRC39-204ENST00000620882 TLR6Q9Y2C9 796 aa5.68□□□□□ -1.5
LRRC39-204ENST00000620882 MRVI1Q9Y6F6 885 aa5.68□□□□□ -1.5
LRRC39-204ENST00000620882 MRPL42Q9Y6G3 142 aaKnown RBP5.68□□□□□ -1.5
LRRC39-204ENST00000620882 SBNO2Q9Y2G9 1366 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 A0A1W2PP55 124 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 MINDY4BA8MYZ0 360 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 TARSP26639 723 aaKnown RBP5.67□□□□□ -1.5
LRRC39-204ENST00000620882 TCEAL1Q15170 157 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 MAP3K11Q16584 847 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 GPATCH3Q96I76 525 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 EAF1Q96JC9 268 aaPredicted RBP5.67□□□□□ -1.5
LRRC39-204ENST00000620882 CEP63Q96MT8 703 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 SPON2Q9BUD6 331 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 SUV39H2Q9H5I1 410 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 ABCB6Q9NP58 842 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 BRD7Q9NPI1 651 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 TTF2Q9UNY4 1162 aaKnown RBP5.67□□□□□ -1.5
LRRC39-204ENST00000620882 FNDC3AQ9Y2H6 1198 aaKnown RBP5.67□□□□□ -1.5
LRRC39-204ENST00000620882 LCE2BO14633 110 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 GIPC1O14908 333 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 SASH3O75995 380 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 BMP1P13497 986 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 CES1P23141 567 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 ETFBP38117 255 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 FCGRTP55899 365 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 HIF1AQ16665 826 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 COL13A1Q5TAT6 717 aaPredicted RBP5.67□□□□□ -1.5
LRRC39-204ENST00000620882 EGFLAMQ63HQ2 1017 aa5.67□□□□□ -1.5
LRRC39-204ENST00000620882 SDE2Q6IQ49 451 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms