RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 GRAPQ13588 217 aa20.69■□□□□ 0.9
CD40-207ENST00000620709 MPNDQ8N594 471 aa20.69■□□□□ 0.9
CD40-207ENST00000620709 SUPT20HQ8NEM7 779 aa20.69■□□□□ 0.9
CD40-207ENST00000620709 GRAPLQ8TC17 118 aaPredicted RBP20.69■□□□□ 0.9
CD40-207ENST00000620709 TAF1P21675 1872 aa20.69■□□□□ 0.9
CD40-207ENST00000620709 IFFO2Q5TF58 517 aa20.68■□□□□ 0.9
CD40-207ENST00000620709 SP8Q8IXZ3 490 aa20.68■□□□□ 0.9
CD40-207ENST00000620709 JMYQ8N9B5 988 aa20.68■□□□□ 0.9
CD40-207ENST00000620709 PNMA8AQ86V59 439 aaPredicted RBP20.68■□□□□ 0.9
CD40-207ENST00000620709 MYD88Q99836 296 aa20.68■□□□□ 0.9
CD40-207ENST00000620709 MKRN1Q9UHC7 482 aaKnown RBP20.68■□□□□ 0.9
CD40-207ENST00000620709 TSR2Q969E8 191 aaKnown RBP20.67■□□□□ 0.9
CD40-207ENST00000620709 IRS4O14654 1257 aaPredicted RBP20.66■□□□□ 0.9
CD40-207ENST00000620709 MAP1SQ66K74 1059 aaPredicted RBP20.66■□□□□ 0.9
CD40-207ENST00000620709 CREBZFQ9NS37 354 aa20.66■□□□□ 0.9
CD40-207ENST00000620709 SALL2Q9Y467 1007 aaPredicted RBP20.66■□□□□ 0.9
CD40-207ENST00000620709 DDX60Q8IY21 1712 aaKnown RBP20.66■□□□□ 0.9
CD40-207ENST00000620709 CCDC30Q5VVM6 783 aa20.65■□□□□ 0.9
CD40-207ENST00000620709 EPS15P42566 896 aa20.64■□□□□ 0.9
CD40-207ENST00000620709 CNTROBQ8N137 903 aa20.64■□□□□ 0.9
CD40-207ENST00000620709 TSPYL6Q8N831 410 aa20.64■□□□□ 0.9
CD40-207ENST00000620709 ZNRF3Q9ULT6 936 aa20.64■□□□□ 0.9
CD40-207ENST00000620709 PASKQ96RG2 1323 aa20.64■□□□□ 0.89
CD40-207ENST00000620709 JARID2Q92833 1246 aaPredicted RBP20.63■□□□□ 0.89
CD40-207ENST00000620709 CELF1Q92879 486 aaKnown RBP20.63■□□□□ 0.89
CD40-207ENST00000620709 RTFDC1Q9BY42 306 aaPredicted RBP20.63■□□□□ 0.89
CD40-207ENST00000620709 VPS33BQ9H267 617 aa20.63■□□□□ 0.89
CD40-207ENST00000620709 DDX58O95786 925 aaKnown RBP20.63■□□□□ 0.89
CD40-207ENST00000620709 SCNN1DP51172 638 aa20.63■□□□□ 0.89
CD40-207ENST00000620709 ITGBL1O95965 494 aaPredicted RBP20.62■□□□□ 0.89
CD40-207ENST00000620709 CXCL9Q07325 125 aa20.62■□□□□ 0.89
CD40-207ENST00000620709 TRIM28Q13263 835 aaKnown RBP20.62■□□□□ 0.89
CD40-207ENST00000620709 SF3B3Q15393 1217 aaKnown RBP20.62■□□□□ 0.89
CD40-207ENST00000620709 TMC4Q7Z404 712 aa20.62■□□□□ 0.89
CD40-207ENST00000620709 CHMP4AQ9BY43 222 aa20.62■□□□□ 0.89
CD40-207ENST00000620709 NSFL1CQ9UNZ2 370 aaKnown RBP20.62■□□□□ 0.89
CD40-207ENST00000620709 TMEM88BA6NKF7 163 aa20.61■□□□□ 0.89
CD40-207ENST00000620709 RAD17O75943 681 aa20.61■□□□□ 0.89
CD40-207ENST00000620709 KIAA2012Q0VF49 1180 aa20.61■□□□□ 0.89
CD40-207ENST00000620709 LTBP1Q14766 1721 aa20.61■□□□□ 0.89
CD40-207ENST00000620709 WWC1Q8IX03 1113 aa20.61■□□□□ 0.89
CD40-207ENST00000620709 ZBTB38Q8NAP3 1195 aaPredicted RBP20.61■□□□□ 0.89
CD40-207ENST00000620709 C6orf229H3BNL8 230 aa20.6■□□□□ 0.89
CD40-207ENST00000620709 RIMBP2O15034 1052 aa20.6■□□□□ 0.89
CD40-207ENST00000620709 HSPA1AP0DMV8 641 aaKnown RBP20.6■□□□□ 0.89
CD40-207ENST00000620709 HSPA1BP0DMV9 641 aaKnown RBP20.6■□□□□ 0.89
CD40-207ENST00000620709 NCBP3Q53F19 620 aaKnown RBP20.6■□□□□ 0.89
CD40-207ENST00000620709 CCDC85AQ96PX6 553 aaPredicted RBP20.6■□□□□ 0.89
CD40-207ENST00000620709 BCL2L13Q9BXK5 485 aa20.6■□□□□ 0.89
CD40-207ENST00000620709 STK31Q9BXU1 1019 aa20.6■□□□□ 0.89
CD40-207ENST00000620709 CWC25Q9NXE8 425 aaPredicted RBP20.6■□□□□ 0.89
CD40-207ENST00000620709 MAP3K2Q9Y2U5 619 aa20.6■□□□□ 0.89
CD40-207ENST00000620709 ZNF521Q96K83 1311 aa20.6■□□□□ 0.89
CD40-207ENST00000620709 ADAMTSL1Q8N6G6 1762 aa20.59■□□□□ 0.89
CD40-207ENST00000620709 GMPSP49915 693 aaPredicted RBP20.59■□□□□ 0.89
CD40-207ENST00000620709 CIAPIN1Q6FI81 312 aa20.59■□□□□ 0.89
CD40-207ENST00000620709 HSP90B1P14625 803 aaKnown RBP20.58■□□□□ 0.89
CD40-207ENST00000620709 GPSM2P81274 684 aa20.58■□□□□ 0.89
CD40-207ENST00000620709 WASHC4Q2M389 1173 aa20.58■□□□□ 0.89
CD40-207ENST00000620709 CCDC191Q8NCU4 936 aa20.58■□□□□ 0.89
CD40-207ENST00000620709 METTL22Q9BUU2 404 aaPredicted RBP20.58■□□□□ 0.89
CD40-207ENST00000620709 TNIP1Q15025 636 aa20.58■□□□□ 0.88
CD40-207ENST00000620709 CCDC27Q2M243 656 aa20.58■□□□□ 0.88
CD40-207ENST00000620709 TWISTNBQ3B726 338 aaPredicted RBP20.58■□□□□ 0.88
CD40-207ENST00000620709 USP50Q70EL3 339 aaPredicted RBP20.58■□□□□ 0.88
CD40-207ENST00000620709 SEC31BQ9NQW1 1179 aa20.58■□□□□ 0.88
CD40-207ENST00000620709 GPRC5DQ9NZD1 345 aa20.58■□□□□ 0.88
CD40-207ENST00000620709 RPS8P62241 208 aaKnown RBP20.57■□□□□ 0.88
CD40-207ENST00000620709 COL13A1Q5TAT6 717 aaPredicted RBP20.57■□□□□ 0.88
CD40-207ENST00000620709 ADARB2Q9NS39 739 aaKnown RBP20.57■□□□□ 0.88
CD40-207ENST00000620709 ABT1Q9ULW3 272 aaKnown RBP20.57■□□□□ 0.88
CD40-207ENST00000620709 COL4A1P02462 1669 aa20.56■□□□□ 0.88
CD40-207ENST00000620709 CNTNAP1P78357 1384 aa20.56■□□□□ 0.88
CD40-207ENST00000620709 PI4KAP2A4QPH2 592 aa20.56■□□□□ 0.88
CD40-207ENST00000620709 PCCAP05165 728 aaPredicted RBP20.56■□□□□ 0.88
CD40-207ENST00000620709 PI4KAP1Q8N8J0 262 aa20.56■□□□□ 0.88
CD40-207ENST00000620709 GPR101Q96P66 508 aaPredicted RBP20.56■□□□□ 0.88
CD40-207ENST00000620709 DBNDD1Q9H9R9 158 aa20.56■□□□□ 0.88
CD40-207ENST00000620709 DUOX1Q9NRD9 1551 aa20.55■□□□□ 0.88
CD40-207ENST00000620709 LRRC37AA6NMS7 1700 aa20.55■□□□□ 0.88
CD40-207ENST00000620709 PDE8AO60658 829 aa20.55■□□□□ 0.88
CD40-207ENST00000620709 FMR1Q06787 632 aaKnown RBP eCLIP20.55■□□□□ 0.88
CD40-207ENST00000620709 CCDC152Q4G0S7 254 aa20.55■□□□□ 0.88
CD40-207ENST00000620709 KSR2Q6VAB6 950 aa20.55■□□□□ 0.88
CD40-207ENST00000620709 YDJCA8MPS7 323 aa20.54■□□□□ 0.88
CD40-207ENST00000620709 SLC4A2P04920 1241 aa20.54■□□□□ 0.88
CD40-207ENST00000620709 NEXNQ0ZGT2 675 aa20.54■□□□□ 0.88
CD40-207ENST00000620709 DOK7Q18PE1 504 aa20.54■□□□□ 0.88
CD40-207ENST00000620709 POLLQ9UGP5 575 aa20.54■□□□□ 0.88
CD40-207ENST00000620709 G3V3G9 751 aa20.53■□□□□ 0.88
CD40-207ENST00000620709 VEGFBP49765 207 aa20.53■□□□□ 0.88
CD40-207ENST00000620709 DCAF8Q5TAQ9 597 aa20.53■□□□□ 0.88
CD40-207ENST00000620709 G2E3Q7L622 706 aa20.53■□□□□ 0.88
CD40-207ENST00000620709 EYA3Q99504 573 aa20.53■□□□□ 0.88
CD40-207ENST00000620709 ANKIB1Q9P2G1 1089 aa20.53■□□□□ 0.88
CD40-207ENST00000620709 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
CD40-207ENST00000620709 TRAF5O00463 557 aa20.53■□□□□ 0.88
CD40-207ENST00000620709 PAXIP1Q6ZW49 1069 aaPredicted RBP20.53■□□□□ 0.88
CD40-207ENST00000620709 IL16Q14005 1332 aa20.52■□□□□ 0.88
CD40-207ENST00000620709 DEFB115Q30KQ5 88 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms