RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 C2CD5Q86YS7 1000 aa12.11□□□□□ -0.47
TRIO-224ENST00000620511 KLHL34Q8N239 644 aa12.11□□□□□ -0.47
TRIO-224ENST00000620511 TTLL11Q8NHH1 800 aa12.11□□□□□ -0.47
TRIO-224ENST00000620511 SUCLG2Q96I99 432 aa12.11□□□□□ -0.47
TRIO-224ENST00000620511 NPHP1O15259 732 aa12.11□□□□□ -0.47
TRIO-224ENST00000620511 CSF1RP07333 972 aa12.11□□□□□ -0.47
TRIO-224ENST00000620511 FTSJ3Q8IY81 847 aaKnown RBP12.11□□□□□ -0.47
TRIO-224ENST00000620511 NLRP3Q96P20 1036 aa12.11□□□□□ -0.47
TRIO-224ENST00000620511 C9orf78Q9NZ63 289 aaPredicted RBP12.11□□□□□ -0.47
TRIO-224ENST00000620511 H0YIN7 160 aa12.1□□□□□ -0.47
TRIO-224ENST00000620511 RABL6Q3YEC7 729 aaPredicted RBP12.1□□□□□ -0.47
TRIO-224ENST00000620511 SLC51AQ86UW1 340 aa12.1□□□□□ -0.47
TRIO-224ENST00000620511 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
TRIO-224ENST00000620511 COG6Q9Y2V7 657 aa12.1□□□□□ -0.47
TRIO-224ENST00000620511 CTSWP56202 376 aa12.09□□□□□ -0.47
TRIO-224ENST00000620511 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
TRIO-224ENST00000620511 MVPQ14764 893 aaKnown RBP12.09□□□□□ -0.47
TRIO-224ENST00000620511 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.09□□□□□ -0.47
TRIO-224ENST00000620511 MASTLQ96GX5 879 aa12.09□□□□□ -0.47
TRIO-224ENST00000620511 BICC1Q9H694 974 aaKnown RBP12.09□□□□□ -0.47
TRIO-224ENST00000620511 ARFGEF1Q9Y6D6 1849 aa12.09□□□□□ -0.47
TRIO-224ENST00000620511 MS4A1P11836 297 aa12.08□□□□□ -0.48
TRIO-224ENST00000620511 NPR1P16066 1061 aa12.08□□□□□ -0.48
TRIO-224ENST00000620511 HOXD11P31277 338 aaPredicted RBP12.08□□□□□ -0.48
TRIO-224ENST00000620511 STYK1Q6J9G0 422 aa12.08□□□□□ -0.48
TRIO-224ENST00000620511 ITPRIPQ8IWB1 547 aa12.08□□□□□ -0.48
TRIO-224ENST00000620511 GREM2Q9H772 168 aa12.08□□□□□ -0.48
TRIO-224ENST00000620511 SEC31BQ9NQW1 1179 aa12.08□□□□□ -0.48
TRIO-224ENST00000620511 WWC3Q9ULE0 1092 aa12.08□□□□□ -0.48
TRIO-224ENST00000620511 PDZRN3Q9UPQ7 1066 aa12.08□□□□□ -0.48
TRIO-224ENST00000620511 LMBR1LQ6UX01 489 aa12.07□□□□□ -0.48
TRIO-224ENST00000620511 C7orf43Q8WVR3 580 aa12.07□□□□□ -0.48
TRIO-224ENST00000620511 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
TRIO-224ENST00000620511 CRAMP1Q96RY5 1269 aa12.07□□□□□ -0.48
TRIO-224ENST00000620511 ZBTB40Q9NUA8 1239 aa12.07□□□□□ -0.48
TRIO-224ENST00000620511 PPP4R2Q9NY27 417 aa12.07□□□□□ -0.48
TRIO-224ENST00000620511 LRRFIP2Q9Y608 721 aaKnown RBP12.07□□□□□ -0.48
TRIO-224ENST00000620511 RTL9Q8NET4 1388 aa12.07□□□□□ -0.48
TRIO-224ENST00000620511 SPEF2Q9C093 1822 aa12.07□□□□□ -0.48
TRIO-224ENST00000620511 SNED1Q8TER0 1413 aa12.07□□□□□ -0.48
TRIO-224ENST00000620511 GNAI3P08754 354 aa12.06□□□□□ -0.48
TRIO-224ENST00000620511 UBTFL1P0CB47 393 aaPredicted RBP12.06□□□□□ -0.48
TRIO-224ENST00000620511 YBX3P16989 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRIO-224ENST00000620511 FAM161AQ3B820 660 aa12.06□□□□□ -0.48
TRIO-224ENST00000620511 CELF1Q92879 486 aaKnown RBP12.06□□□□□ -0.48
TRIO-224ENST00000620511 ZNF622Q969S3 477 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRIO-224ENST00000620511 PIM2Q9P1W9 311 aa12.06□□□□□ -0.48
TRIO-224ENST00000620511 HSP90B1P14625 803 aaKnown RBP12.06□□□□□ -0.48
TRIO-224ENST00000620511 CCDC152Q4G0S7 254 aa12.06□□□□□ -0.48
TRIO-224ENST00000620511 PRPF40BQ6NWY9 871 aaKnown RBP12.06□□□□□ -0.48
TRIO-224ENST00000620511 OLFM4Q6UX06 510 aa12.06□□□□□ -0.48
TRIO-224ENST00000620511 RPGRQ92834 1020 aaKnown RBP12.06□□□□□ -0.48
TRIO-224ENST00000620511 LRRC37AA6NMS7 1700 aa12.05□□□□□ -0.48
TRIO-224ENST00000620511 RFX5P48382 616 aaPredicted RBP12.05□□□□□ -0.48
TRIO-224ENST00000620511 TTLL6Q8N841 843 aa12.05□□□□□ -0.48
TRIO-224ENST00000620511 CNKSR1Q969H4 720 aa12.05□□□□□ -0.48
TRIO-224ENST00000620511 CRBNQ96SW2 442 aa12.05□□□□□ -0.48
TRIO-224ENST00000620511 C1orf115Q9H7X2 142 aa12.05□□□□□ -0.48
TRIO-224ENST00000620511 DDX19BQ9UMR2 479 aa12.05□□□□□ -0.48
TRIO-224ENST00000620511 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
TRIO-224ENST00000620511 GNAI2P04899 355 aa12.04□□□□□ -0.48
TRIO-224ENST00000620511 ITGA6P23229 1130 aa12.04□□□□□ -0.48
TRIO-224ENST00000620511 ALDH1B1P30837 517 aa12.04□□□□□ -0.48
TRIO-224ENST00000620511 MTX1Q13505 466 aa12.04□□□□□ -0.48
TRIO-224ENST00000620511 GRAPQ13588 217 aa12.04□□□□□ -0.48
TRIO-224ENST00000620511 DDX46Q7L014 1031 aaKnown RBP12.04□□□□□ -0.48
TRIO-224ENST00000620511 GRAPLQ8TC17 118 aaPredicted RBP12.04□□□□□ -0.48
TRIO-224ENST00000620511 RBM17Q96I25 401 aaKnown RBP12.04□□□□□ -0.48
TRIO-224ENST00000620511 LTBP1Q14766 1721 aa12.04□□□□□ -0.48
TRIO-224ENST00000620511 A0A1B0GUL6 1792 aa12.04□□□□□ -0.48
TRIO-224ENST00000620511 RPS8P62241 208 aaKnown RBP12.03□□□□□ -0.48
TRIO-224ENST00000620511 DALRD3Q5D0E6 543 aaKnown RBP12.03□□□□□ -0.48
TRIO-224ENST00000620511 SIRT2Q8IXJ6 389 aa12.03□□□□□ -0.48
TRIO-224ENST00000620511 ZNF594Q96JF6 807 aaPredicted RBP12.03□□□□□ -0.48
TRIO-224ENST00000620511 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
TRIO-224ENST00000620511 BCS1LQ9Y276 419 aa12.03□□□□□ -0.48
TRIO-224ENST00000620511 PNMA6EA0A0J9YXQ4 647 aa12.02□□□□□ -0.48
TRIO-224ENST00000620511 BBOX1O75936 387 aa12.02□□□□□ -0.48
TRIO-224ENST00000620511 KLHDC4Q8TBB5 520 aa12.02□□□□□ -0.48
TRIO-224ENST00000620511 SBF1O95248 1867 aa12.02□□□□□ -0.49
TRIO-224ENST00000620511 C21orf2O43822 256 aa12.01□□□□□ -0.49
TRIO-224ENST00000620511 PTPN12Q05209 780 aaKnown RBP12.01□□□□□ -0.49
TRIO-224ENST00000620511 CEP85Q6P2H3 762 aa12.01□□□□□ -0.49
TRIO-224ENST00000620511 PUS3Q9BZE2 481 aaKnown RBP12.01□□□□□ -0.49
TRIO-224ENST00000620511 CCDC88AQ3V6T2 1871 aa12.01□□□□□ -0.49
TRIO-224ENST00000620511 DUOX1Q9NRD9 1551 aa12.01□□□□□ -0.49
TRIO-224ENST00000620511 WTIPA6NIX2 430 aaPredicted RBP12.01□□□□□ -0.49
TRIO-224ENST00000620511 PPEF1O14829 653 aaPredicted RBP12.01□□□□□ -0.49
TRIO-224ENST00000620511 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
TRIO-224ENST00000620511 ATP8B2P98198 1209 aa12.01□□□□□ -0.49
TRIO-224ENST00000620511 IFIT5Q13325 482 aaKnown RBP12.01□□□□□ -0.49
TRIO-224ENST00000620511 POLA2Q14181 598 aa12.01□□□□□ -0.49
TRIO-224ENST00000620511 EXOC6Q8TAG9 804 aa12.01□□□□□ -0.49
TRIO-224ENST00000620511 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
TRIO-224ENST00000620511 ATP6V0A2Q9Y487 856 aa12.01□□□□□ -0.49
TRIO-224ENST00000620511 ANKRD18BA2A2Z9 1011 aa12□□□□□ -0.49
TRIO-224ENST00000620511 PRELPP51888 382 aa12□□□□□ -0.49
TRIO-224ENST00000620511 CCDC57Q2TAC2 916 aa12□□□□□ -0.49
TRIO-224ENST00000620511 ANKRD18AQ8IVF6 992 aa12□□□□□ -0.49
TRIO-224ENST00000620511 SP8Q8IXZ3 490 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms